Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933465.1_202017-01-04] 5,378 sequences; 40,428,501 total letters Query= NC_021348.1 Length=156558 Score E Sequences producing significant alignments: (Bits) Value seq2959 86.0 6e-12 >seq2959 Length=2134 Score = 86.0 bits (94), Expect = 6e-12 Identities = 108/147 (73%), Gaps = 6/147 (4%) Strand=Plus/Minus Query 114586 GGCCCGGGCCGTGGCTC---TGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACC 114642 || || |||||||| || ||||||| || |||| | |||| |||| |||||||| Sbjct 1032 GGTCCCGGCCGTGGTTCCGGTGCCGGT---TCCATGGTGGCGTACGCCATGCGCATCACC 976 Query 114643 TCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGCCCC 114702 | | ||||| || | ||| ||||| ||||||||||| |||||||||||||| Sbjct 975 GAGCTGAACCCGCTCGCGCACGGGCTGATCTTCGAGCGCTTCCTCAACCCGGACCGCGTG 916 Query 114703 GACTTCCCCGACATCGACGTCGACTTC 114729 | | |||||| ||||||| |||||| Sbjct 915 TCCATGCCCGACTTCGACGTGGACTTC 889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500823929847840