Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933465.1_202017-01-04] 5,378 sequences; 40,428,501 total letters Query= NC_023696.1 Length=157568 Score E Sequences producing significant alignments: (Bits) Value seq2959 89.7 5e-13 >seq2959 Length=2134 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 118180 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 118239 || || |||||||| |||| | || || |||| | |||| |||| |||||||| | Sbjct 1032 GGTCCCGGCCGTGGTTCCGGTGCCGGTTCCATGGTGGCGTACGCCATGCGCATCACCGAG 973 Query 118240 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGCCCCGAC 118299 | ||||| || | ||| ||||| ||||||||||| |||||||||||||| | Sbjct 972 CTGAACCCGCTCGCGCACGGGCTGATCTTCGAGCGCTTCCTCAACCCGGACCGCGTGTCC 913 Query 118300 TTCCCCGACATCGACGTCGACTTC 118323 | |||||| ||||||| |||||| Sbjct 912 ATGCCCGACTTCGACGTGGACTTC 889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504055712576640