Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933465.1_202017-01-04] 5,378 sequences; 40,428,501 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3929 352 4e-91 seq181 210 3e-48 seq1055 190 3e-42 seq664 143 4e-28 seq9 141 1e-27 seq1064 105 1e-16 seq395 104 3e-16 seq476 95.1 2e-13 seq357 93.3 6e-13 >seq3929 Length=1496 Score = 352 bits (390), Expect = 4e-91 Identities = 442/596 (74%), Gaps = 8/596 (1%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||| | ||| || ||||||||||| || || |||||||| |||| | || Sbjct 357 GAGCCGTTCCTGGTGGAGAACCCGAACCGGTTCGTGCTGTTCCCGATCCAGGAGCACGAC 416 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 | ||| | |||||| || ||||| ||||| || || ||||| ||||||||| | ||||| Sbjct 417 GTGTGGCAGATGTAC-AAGAAGGCGGAGGCGTCGTTCTGGACGGCCGAGGAGCTGGACCT 475 Query 1455836 CGGCGC-CGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGC 1455894 || || |||| | |||||| | |||| ||| |||||||||| |||||||||| Sbjct 476 -GGTGCACGACCTGAAGGACTGGGGGAACCTGACGGACAACGAGCGCCACTTCATCAAGC 534 Query 1455895 ACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGC 1455954 |||| || || || || ||| |||||||| ||||||||| |||||||||||| | Sbjct 535 ACGTGCTAGCATTCTT-CGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCGATGAAC 593 Query 1455955 TTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATC 1456014 || | || ||||| ||| |||| ||||| || | || ||||| ||||||||||||||| Sbjct 594 TTCAGCAATGAGGTGCAAGTGCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCGCCATC 653 Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || ||||||||||| || |||||||| ||||||||||| ||| |||||||| | || Sbjct 654 GAGAACATCCACTCGGAGGTGTACTCGCTGCTGATCGACACGTACATCAAGGACGCCGTG 713 Query 1456075 GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGAC 1456134 |||||||| ||| | | || |||||||| ||| | |||| ||| ||| |||||| | Sbjct 714 GAGAAGGATCACTTGCTGCGTGCCATCGAGACGATCCCGTGCGTGGAGAAGAAGGCCCGC 773 Query 1456135 TGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCT 1456194 |||||| | |||||| || | | ||| | || | ||||| || | | | Sbjct 774 TGGGCGCTCAAGTGGTGTGAC-CCTCGTGTTTCGTC-CTACCCGGAGCGTCTGCTGGCGT 831 Query 1456195 TTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGA 1456253 | |||| ||| |||||||| || |||||||| |||||| ||||||| |||||||||| Sbjct 832 TCGCCGCCGTGGAGGGCATTTTCTTCTCGGGTTCCTTCTGCTCCATCTTCTGGCTCAAGA 891 Query 1456254 AGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 |||||||||||||||| |||| | |||| ||||| | ||||| || ||||| Sbjct 892 AGCGCGGCCTCATGCCTGGTC-TGAGCTTCTCGAACGAGCTCATCAGCCGGGACGA 946 Score = 161 bits (178), Expect = 1e-33 Identities = 240/327 (73%), Gaps = 14/327 (4%) Strand=Plus/Plus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCG-ACCGAC 1456510 ||||| ||||| || || || | ||| ||| | | || ||||||| | || | | | Sbjct 952 TGCACACGGACTTCGCGTGCCTCATGTACTCGAAGTTGGTGAACAAGCTGCCGGAGAGCC 1011 Query 1456511 GTGCCCAAGCAGATCAT-CGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTC 1456569 | | || || |||| | ||| || || || | ||| ||| | ||||| || ||||| || Sbjct 1012 GCGTGCACGC-GATCGTGCGT-GACGCTGTGGTGATTGAGCACGAGTTCGTGAGCGACTC 1069 Query 1456570 GCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTT 1456629 ||| || |||| ||| |||||||||||| | ||||||||||||||||||| | | || Sbjct 1070 GCTCCCCGTGGAGCTGATCGGCATGAAC-TCTGCGCTCATGTGCCAGTACATCG-AGTTC 1127 Query 1456630 GTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTAC--CG-GACGGCCAA 1456686 || |||||||||||||| | || || ||| ||| |||| || || | || Sbjct 1128 GTGGCCGACCGCCTGCTGTACTCACT-GGGTGCATCCAAGATCTACAACGTGAAG---AA 1183 Query 1456687 CCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCG 1456746 ||||||| |||||||| |||||||||| |||||||||||||||| |||||| || Sbjct 1184 CCCGTTCGACTGGATGGATATGATCTCGCTGCAGGGCAAGACCAACTTCTTCGAGAAGCG 1243 Query 1456747 CGT-GGCGAGTACGCCAAGGCCGGCGT 1456772 ||| ||||||||| ||||||| || || Sbjct 1244 CGTGGGCGAGTACTCCAAGGCTGGTGT 1270 >seq181 Length=41757 Score = 210 bits (232), Expect = 3e-48 Identities = 353/505 (70%), Gaps = 17/505 (3%) Strand=Plus/Plus Query 259679 GAGCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTAC 259738 ||||||||||| | || || | |||||| ||||| ||| ||||||| ||| ||| Sbjct 20700 GAGCACAAGGACGAGCTTAACTCGGCCATCATCCACGACCGGGACTTTGAGTACGACTAC 20759 Query 259739 TTTGGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGA 259797 || || | ||| || | || || | ||||| | ||| || | ||||| || Sbjct 20760 TTCGGCTTCAAGACGCTCGAGCGGGGC-TACCTCTTCCGCGTGAACGGAAAGGTCGTGGA 20818 Query 259798 GCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGA 259857 ||| |||||| | ||| ||||||| || || || || ||| || | | | Sbjct 20819 GCGCCCCCAGCAGATGATCATGCGCGTGGCGCTGGG----TATTCACAAGC--AAGACAT 20872 Query 259858 CAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTC 259917 | | ||| |||| ||| | || || ||| |||||| ||| ||| || || Sbjct 20873 CCAGGCG-----GCAC-TGCAC---ACGTATGAGCTCATGTCACAGATGTTCTTTACGCA 20923 Query 259918 AGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCT 259977 |||||||||||||||||||| |||||||||||||| |||||| |||||||| || || Sbjct 20924 CGCGACGCCCACGCTCTTTAACGCCGGCACGCCGCGTCCGCAGCTGTCGTCGTGTTTCCT 20983 Query 259978 GTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCT 260037 | ||| |||| ||| ||| ||||| |||||||| || ||||||||||||||||||||| Sbjct 20984 GCTGGCCATGCAGGACGACTCGATTGAGGGCATTTACGACACGCTCAAGCAGTGCGCGTG 21043 Query 260038 CATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGC 260097 |||||||||| |||||| || || || || ||||| | |||||| || | Sbjct 21044 CATCTCCAAGTGGGCCGGAGGTATTGGCATTAGTATGCACAACATCCGCGCCACGAACAG 21103 Query 260098 CTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAA 260157 |||| | ||||| ||||| |||||||| | | |||||||| | || || || Sbjct 21104 CTACATCCGCGGCACGAACGGATCATCCAACGGGATCATCCCCATGCTGAGGGTCTTCAA 21163 Query 260158 CGACACGGCGCGCTACGTCGACCAG 260182 |||||||| ||||| || |||||| Sbjct 21164 TGACACGGCCCGCTATGTGGACCAG 21188 Score = 127 bits (140), Expect = 3e-23 Identities = 335/503 (67%), Gaps = 20/503 (4%) Strand=Plus/Plus Query 262913 AGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGA 262972 |||| ||| | ||||||||| | |||||||| | |||||||| || ||||| | |||| Sbjct 22093 AGCACGGCATCCGCAACTCGCTCCTCGTGGCTCCGATGCCCACTGCGTCGACGGCTCAGA 22152 Query 262973 TCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGC 263032 | ||||||||| |||| | ||||| |||| ||||| |||| |||||||||| Sbjct 22153 TTTTGGGCAACAACGAGTCCATCGAGCCGTACACGTCGAACATGTACAACCGCCGCGTGC 22212 Query 263033 TCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCC 263092 | | || || || || | || ||| |||| | ||| || | | || ||| Sbjct 22213 TGGCTGGTGAGTTCACGATCGTGAACAAGTACCTCATGAAGGAGCTGATCGAGCTGGGCA 22272 Query 263093 TGTGGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAG-GGCTCGGTGCAG--GGCT 263149 | |||||||| || | ||| ||| | | | || | || | ||||| |||||| || Sbjct 22273 TCTGGACGCCTGAGGTGCGCAACCAGATTCTGGCTG-ACGGTGGCTCCGTGCAGAAGG-- 22329 Query 263150 TTGACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGC 263209 ||| | | | ||| | | |||||| | |||||| ||||||||| | Sbjct 22330 -TGAAATCCA-----TTCCGGACCAGGTCAAGGAGAAGTACAAGACGGTGTGGGAGAT-- 22381 Query 263210 CCAACCGGGTGACC---ATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCC 263266 ||| | | | || | || || |||| ||||| | |||| | |||||||| Sbjct 22382 -CAAGCAGAAGGCCGTGTTGGACCTGTCGGCGGACCGTGGCGCCTACATTTGCCAGAGCC 22440 Query 263267 AGTCGCTCAACCTGTACCTCGCCGACCCGACG-GCCGAGAGCATCACGTCGATGCACGCC 263325 ||||||| ||| | || | |||||||||||| | ||| | ||||| |||||| | Sbjct 22441 AGTCGCTGAACATTCACATTGCCGACCCGACGATTAGCAAGC-TGACGTCCATGCACTTC 22499 Query 263326 TATGCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCC 263385 || || ||| || |||||||| ||||||||||| ||||| || || ||| Sbjct 22500 TACGCCTGGAAGAAGGGGCTCAAGACGGGCATGTACTACATGCGCGGACGCCCGAAAGCC 22559 Query 263386 AACGCCATTCAATTCACCGTCGA 263408 ||||||| || |||||||| || Sbjct 22560 GACGCCATCCAGTTCACCGTGGA 22582 Score = 113 bits (124), Expect = 6e-19 Identities = 331/512 (65%), Gaps = 18/512 (4%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || || ||||||||||| ||| | || ||| ||||||||| ||||||||||| ||| | Sbjct 21189 GGAGGAGGCAAGCGCAAAGGCTCGTTCGCCATCTACCTGGAGCCGTGGCACGCTGACGTG 21248 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | ||||| || ||||||||||||| | | | | ||| |||||||| Sbjct 21249 TTCGAGTTCCTGGAGCTGCGCAAGAACCACGGCA----ACGAGCTGCACC--GCGCGCGC 21302 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || ||||| |||| |||||| ||| ||||| ||| || ||| | | || Sbjct 21303 GACCTCTTCTACGCTCTGTGGGTCCCCGATCTGTTCATGAAGCGTGTGGAAGCGAACGGC 21362 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 | ||| || || ||||| ||||| ||||| || |||| |||| |||| | Sbjct 21363 AAGTGGAGCCTTTTCTGCCCCAATGAGGCCCCCGGACTCTACGAGTGCTGGGGCGACGAG 21422 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTC-GTGCC 262083 || || | || || ||| |||| ||| || |||| Sbjct 21423 TTCGAGACTCTGTACGAGAAGTACGAGAAGGAGGGGCGCGCGCGCAAGACGATCAATGCC 21482 Query 262084 CGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACAT 262143 | ||| | |||| ||||| | | || || || ||||| || ||| | ||| Sbjct 21483 ----CAGCAGCTGTGGTTCGCCATCCTGGACGCGCAGATTGAGACGGGTGTGCCGTTCAT 21538 Query 262144 GGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACA 262201 | | ||||||||||| | ||||| | |||||||||||||| ||||| | || Sbjct 21539 GCTGTACAAGGACGCGGCCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGATCCGCTC 21598 Query 262202 GAGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGC 262261 ||| |||| ||||| |||||| | ||| |||||||| |||| |||||| Sbjct 21599 GAG--CAACTTGTGCTGCGAGATTATGGAGTACACGTCGCCCGATGAGGTGGCGGTGTGC 21656 Query 262262 AACCTCTCGAGCGTGGCCCTGCCCAAGTTTGT 262293 ||||| || |||||||| ||||||||||| Sbjct 21657 AACCTGGCGTCTGTGGCCCTCCCCAAGTTTGT 21688 >seq1055 Length=9094 Score = 190 bits (210), Expect = 3e-42 Identities = 275/388 (71%), Gaps = 0/388 (0%) Strand=Plus/Plus Query 332856 CGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCA 332915 |||| | |||||| ||||| |||||||| || |||||||| | || |||||||| | Sbjct 4087 CGTCGGGTAGGCGCGTGAAGCGGAGGATGGCGCAGCGGCTCTGGATGGGCTCGATGATCT 4146 Query 332916 TTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCG 332975 | | ||| ||||||||||||| || |||| ||| || | | |||||||| Sbjct 4147 TAGTCGAGTTGTTGCAGGCCAGCGCGAACCTCGTGGTGGCCGAGAAGATCTCCATGGTGC 4206 Query 332976 ACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCT 333035 || || |||||||||||||| | || | ||||||| ||||| ||||| | |||| Sbjct 4207 GGCGCAGCGCCTGTTGGGCCGCGGCTGTCATCGAGTCGGCTTCGTCCAGGATCACAATCT 4266 Query 333036 TGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCA 333095 ||||||| || | || || ||| ||| | || ||||| || |||||| Sbjct 4267 TGTGGCGGCCCGGGGGTAGCGTCACCTTTTGCTGCGCAAACATCTTGATCTTCGTGCGCA 4326 Query 333096 CGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCG 333155 | ||| | |||||| ||||| ||||||||||| || |||||||||| | | | | Sbjct 4327 CCGTGTCGATGCCGCGGTCGTCAGACGCGTTGAGCTCCAGCACGGCCTGTTTGACACTGG 4386 Query 333156 CACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGAC 333215 || | || ||||||||| ||| |||||| |||||||| ||||| || ||||| | Sbjct 4387 TGCCTAGCAGTTCGCGCGCCAAACACAGGATGCTGGTGGTCTTCCCCGTTCCCGGCGGGC 4446 Query 333216 CCGCCAGCAAGAGGTTGGGCATGTTGCC 333243 ||| ||| | |||||| | ||||||||| Sbjct 4447 CCGACAGGATGAGGTTCGTCATGTTGCC 4474 >seq664 Length=16289 Score = 143 bits (158), Expect = 4e-28 Identities = 206/289 (71%), Gaps = 6/289 (2%) Strand=Plus/Plus Query 724852 CGGTTGGCAAGCGCGGTCGCGGCCAGCGCAAGAAGAATTATGCCTCGTACTCGTCCTTTA 724911 |||||| |||| ||| ||| || |||||||| | | ||||||||| | | | Sbjct 15268 CGGTTGCCAAGTCCGGCAAGGGCAAGGGCAAGAAGCGTGTCGAATCGTACTCGACGTACA 15327 Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 ||||||||||||| || ||||||||| || | | ||| | | | | | | Sbjct 15328 TCTACAAGGTGCTGCGTCAAGTGCACCCCGAGACGGGT-----ATCAGCAAGCGCGGC-A 15381 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 ||||||||||||||||||| |||||||||| |||| ||||||| | | |||||||| Sbjct 15382 TGTCGATCATGAACTCGTTCATCAACGACATCTTCGAGCGCATCGCCTCGGAGGCCGGCA 15441 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||| |||| | ||||||| ||| | || || ||||||||||| ||||||| Sbjct 15442 AGCTGTCGCGTTACAACAAGAAGTCGACGCTGTCCAGCCGTGAGATCCAGACGGCCGTGC 15501 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 |||| || | | || || ||||||| ||||||||| || |||||||| Sbjct 15502 GCCTCATGCTCCCTGGTGAGCTGGCCAAGCACGCCGTGTCGGAGGGCAC 15550 >seq9 Length=123938 Score = 141 bits (156), Expect = 1e-27 Identities = 195/272 (72%), Gaps = 12/272 (4%) Strand=Plus/Plus Query 724872 GGCCAGCGCAAGAAGAATTATGCCTCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAG 724931 ||| || |||||||| | | ||||||||| ||| |||||||||||||| ||| Sbjct 34169 GGCAAGGGCAAGAAGCGTGTCGAATCGTACTCGACCTACATCTACAAGGTGCTGCGCCAG 34228 Query 724932 GTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC---ATGTCGATCATGAACTCG 724988 ||||||||| || || |||| | |||| | |||||||||||||||||| Sbjct 34229 GTGCACCCCGAGAC-----GGGCATC----AGCAAGCGCGGTATGTCGATCATGAACTCG 34279 Query 724989 TTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAAC 725048 || ||||||| || |||| || |||| | | |||||||| ||| |||| | |||| Sbjct 34280 TTCATCAACGATATCTTCGAGCGTATCGCCTCGGAGGCCGGCAAGCTGTCGCGTTACAAC 34339 Query 725049 AAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGC 725108 ||| ||| | || || ||||||||||| ||||||||||| || | | || Sbjct 34340 AAGAAGTCGACGCTGTCCAGCCGTGAGATCCAGACGGCCGTGCGCCTCATGCTCCCGGGT 34399 Query 725109 GAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || ||||||| ||||||||| || |||||||| Sbjct 34400 GAGCTGGCCAAGCACGCCGTGTCGGAGGGCAC 34431 >seq1064 Length=8955 Score = 105 bits (116), Expect = 1e-16 Identities = 166/234 (71%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 1152842 GGCTGCTTGCGCGCGATGATCTCCCACATGACGACGCCAAACGAGTAGACATCGGCCTTT 1152901 ||| ||| || || | ||||| ||| ||||| |||| ||| |||| |||||||| Sbjct 6287 GGCGGCTCGCACGTGTCCATCTCTGACAGCACGACTCCAAGCGAATAGATGTCGGCCTTC 6228 Query 1152902 TCCGAATACTTTTCGCCGCGCAA-GATCTCGGGCGCCGTCCACGCCGGCGTGC---CGCA 1152957 ||||| ||||| | ||| | ||| |||||||||||| |||||| | |||||| ||| Sbjct 6227 TCCGAGTACTTCTTGCC-CTCAATGATCTCGGGCGCGGTCCACAGCAGCGTGCCCACGCC 6169 Query 1152958 GCGGGTCATCGTCGCATTGTCCTGGCGGATGCGGGCAAAGCCAAAGTCGGCCACCTTGAC 1153017 ||||||||| | ||| | ||| ||||| | |||||||||| || |||| | Sbjct 6168 AGACGTCATCGTCTCGTTGACGTGGGTCTTGCGGCTGACGCCAAAGTCGCTCAGCTTGGC 6109 Query 1153018 GGTGAAATTGTCGTCGACGAGCAGGTTGGACGACTTTTGGAGGTCGCGGTGCAC 1153071 ||| ||| || | |||| ||| |||||| ||||||||||||||| Sbjct 6108 ATGGAACTTGCGGTTTAGCAGCACGTTCTTCGACTT---GAGGTCGCGGTGCAC 6058 >seq395 Length=25745 Score = 104 bits (114), Expect = 3e-16 Identities = 218/322 (68%), Gaps = 6/322 (2%) Strand=Plus/Plus Query 2133558 GACGAGATGGTGACGGTGCGCGATATTGACTTTTTCTCCATGTGCGAGCACCACCTGCTG 2133617 ||||||||||| | ||||| || || ||| | | ||||||||||||||||||| || || Sbjct 18788 GACGAGATGGTCATCGTGCGGGACATCGACCTGTACTCCATGTGCGAGCACCACATGGTG 18847 Query 2133618 CCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCCCGCGGGCAAGATCATCGGTCTGAGC 2133677 || || | ||||||| ||| | || ||| | ||| ||||| | | || || ||| Sbjct 18848 CCGTTCACGGGCAAGGTGCACATCGGTTACATCCCCAACGGCAAAGTGCTGGGCCTCAGC 18907 Query 2133678 AAGATCCCGCGCATCGTCGACATGTTTTCCGACCGCTTCCAAGTACAGGAGGCACTCACG 2133737 ||| || ||||| | ||| | ||||| ||| | || || |||||| ||||| Sbjct 18908 AAGCTCGCGCGCGTGAGCGAGGTCTTTTCGCGCCGTCTGCAGGTGCAGGAGCGCCTCACC 18967 Query 2133738 CGCCAGATCG---CCGAGAGCGTGAGCCAGGTTACGGGCGCGCGCGGCGTCGGCGTCGTC 2133794 ||||||| ||| | | || || || | || | | ||||| | ||| || Sbjct 18968 AAGCAGATCGCCACCGCCATCATGGGCGTCATT--GAGCCCAAG-GGCGTGGCCGTTGTG 19024 Query 2133795 CTCGAGGGCCTGCACATGTGCGTGTGTATGCGCGGCGTGCGCAAAACGGGCTCGAACACG 2133854 |||||| | ||||||||| || ||||||||||| || | ||| | | ||| Sbjct 19025 ATCGAGGCCACCCACATGTGCATGGTCATGCGCGGCGTCGAGAAGAGCGGCGCCAGCACC 19084 Query 2133855 GTCACGCGCGTCCTCCTGGGCG 2133876 |||||| || | | ||||||| Sbjct 19085 GTCACGAGCTCCGTGCTGGGCG 19106 >seq476 Length=22494 Score = 95.1 bits (104), Expect = 2e-13 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 165753 GACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAG 165812 |||||||||| ||||||||| | ||||| || ||||||||| ||||| ||||||||||| Sbjct 13502 GACCTGGTCAGCTGGGGCGCCATTGGTGCCCGTACCACCGAGTGCCAGCTGCACCGCGAG 13443 Query 165813 ATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGG 165862 | |||| ||| | ||||||| |||||||| ||| |||| | ||| Sbjct 13442 CTCTGCTCGGGGCTCTCCATGCCCATCGGCTTCAAGAACGGCACGGGCGG 13393 >seq357 Length=28175 Score = 93.3 bits (102), Expect = 6e-13 Identities = 160/230 (70%), Gaps = 7/230 (3%) Strand=Plus/Plus Query 1152882 ACGAGTAGACATCGGCCTTTTCCGAATACTTTTCGCCGCGCAAGATCTCGGGCGCCGTCC 1152941 ||||||| || || ||||| || || | |||||||||| ||||||||||||||||| Sbjct 20603 ACGAGTACACGTCCGCCTTCTCGCTGTAGGTCTCGCCGCGCAGGATCTCGGGCGCCGTCC 20662 Query 1152942 ACGCCGGCGTGC---CGCAGCGGGTCATCGTCGCATTGTCCTGGCGGATGCGGGCAAAGC 1152998 || | |||||| ||| | ||||||||| | | | || ||| |||| | | Sbjct 20663 ACAGCAGCGTGCCCACGCCGTTGGTCATCGTGTCGTCGGCCGAGCGCTCGCGGCTGAGCC 20722 Query 1152999 CAAAGTCGGCCACCTTGACGGTGAAATTGTCGTCGACGAGCAGGTTGGACGACTTTTGGA 1153058 |||||||| | ||| | | || ||||| |||| |||| |||||| || Sbjct 20723 CAAAGTCGCTGAGCTTCGCACGCAGCCGGTTGTCGAGCAGCACGTTGAGCGACTT---GA 20779 Query 1153059 GGTCGCGGTGCACGATCGGCCGTTCGCGCCCGTGCAGATAGGCCA-CGCC 1153107 |||||||||| | ||| | | | ||| ||||||||||| |||| |||| Sbjct 20780 GGTCGCGGTGGATGATAATCGGCTGGCGGCCGTGCAGATACGCCAGCGCC 20829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177292482015236