Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933465.1_202017-01-04] 5,378 sequences; 40,428,501 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq181 282 5e-71 seq3929 154 2e-32 seq417 152 6e-32 seq2669 118 1e-21 seq272 102 9e-17 seq30 87.8 2e-12 >seq181 Length=41757 Score = 282 bits (312), Expect = 5e-71 Identities = 545/788 (69%), Gaps = 26/788 (3%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 |||||||||| || ||||||| ||| | ||| | || ||| | | | ||||| Sbjct 20836 TCATGCGCGTGGCGCTGGGTATTCACAAGCAAGACATCCAGGCGGCACTGC-ACACGTAT 20894 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 || | ||| || | || |||||||||||| ||||| || || || ||||| || ||| Sbjct 20895 GAGCTCATGTCACAGATGTTCTTTACGCACGCGACGCCCACGCTCTTTAACGCCGGCACG 20954 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | || ||| ||||| || |||||| |||| ||| |||| |||||||| || ||| Sbjct 20955 CCGCGTCCGCAGCTGTCGTCGTGTTTCCTGCTGGCCATGCAGGACGACTCGATTGAGGGC 21014 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 || ||||| ||||||||| |||| || ||||||||||||| | || ||||| || || Sbjct 21015 ATTTACGACACGCTCAAGCAGTGCGCGTGCATCTCCAAGTGGGCCGGAGGTATTGGCATT 21074 Query 53432 CAC-TGCTCGAACGTCCGTGC---GAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487 ||| | ||| |||| || |||| || || ||| || |||||||| | Sbjct 21075 AGTATGCAC-AACATCCGCGCCACGAACAGCT-AC--ATCCGCGGCACGAACGGATCATC 21130 Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547 | | || ||| | || ||||| | |||||||| |||||||||| || || ||||||| Sbjct 21131 CAACGGGATCATCCCCATGCTGAGGGTCTTCAATGACACGGCCCGCTATGTGGACCAGGG 21190 Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607 || || |||||||| || ||||||||||||||||| |||||||||||||| ||| | | Sbjct 21191 AGGAGGCAAGCGCAAAGGCTCGTTCGCCATCTACCTGGAGCCGTGGCACGCTGACGTGTT 21250 Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC---CGTGACCT 53664 ||||| || |||||||| ||| || || | | ||| ||| | || || ||||| Sbjct 21251 CGAGTTCCTGGAGCTGCGCAAGAACCACGG---CAACGAGCTGCACCGCGCGCGCGACCT 21307 Query 53665 GTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGT 53723 || ||| ||||||||| | || || || |||||| | ||||| | ||| ||| Sbjct 21308 CTTCTAC-GCTCTGTGGGTCCCCGATCTGTTCATGAAGCGTGTGGAAGCGAACGGCAAGT 21366 Query 53724 GGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCA-GGGTGTCTACGGTGAGGAGTTT 53782 || ||| | ||||| || ||| |||||| ||| | | ||| || || || ||||| Sbjct 21367 GGAGCCTTTTCTGCCCCAATGAGGCCCCCGGACTCTACGAGTG-CTGGGGCGACGAGTT- 21424 Query 53783 AACGAGA---TGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839 ||||| |||| || ||||| |||| ||| |||| | |||| || Sbjct 21425 --CGAGACTCTGTACGAGAAGTACGAGAAGGAGGGGCGCGCGCGCAAGACGATCAATGCC 21482 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | || | ||| || ||||| | ||| | |||||||| ||||| |||| Sbjct 21483 CAGCAGCTGTGGTTCGCCATCCTGGACGCGCAGATTGAGACGGGTGTGCCGTTCATGCTG 21542 Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGC 53959 |||||||| ||| |||| ||| |||||| ||||| ||||| ||| |||||| Sbjct 21543 TACAAGGACGCGGCCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGATCCGCTCGAGC 21602 Query 53960 AACTTATG 53967 ||||| || Sbjct 21603 AACTTGTG 21610 Score = 208 bits (230), Expect = 8e-49 Identities = 567/849 (67%), Gaps = 53/849 (6%) Strand=Plus/Plus Query 55106 AAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAAT 55165 ||||| |||| ||||| || ||||| |||||| ||||| |||||| ||| || Sbjct 21714 AAGCTGTACGAGGTGACCAAGGTGGTGACCCGGAACTTGAACAAGGTCATTGACGTCAAC 21773 Query 55166 TACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCGGT 55225 |||||||| || | |||||||||||||||| | || ||||| || | | || || Sbjct 21774 TACTACCCCGTGGAGGAGGCGCGCAAGTCCAACATGCGCCACCGCCCGGTTGGTATTGGC 21833 Query 55226 GTACAGGGCTTGGCCGA--CATCT-TCATGATGCTCGGATTGCCCTTCGA---CTCGGAA 55279 || ||||| | || || ||| | || | ||| | ||| ||||| | || || Sbjct 21834 GTCCAGGGTCTCGCGGATGCATTTATCCTCATGAACTA--TGCG-TTCGAGAGCCCGCAA 21890 Query 55280 CCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGA 55338 || || ||| | ||| | |||||||| || || ||||||| || | | ||| Sbjct 21891 ---GCCCGTGAACTCAACATGAACATCTTCGAGACG-ATCTACTACGCTTCTATGGAGAC 21946 Query 55339 GTCGT--GTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGCT 55396 ||| | ||| | | | |||| ||| | ||||||||||||| | ||||| || Sbjct 21947 CTCGATGGAGATC-GCCAAGGAGCT-GGGCCCGTACGAGACGTTCCAGGGATCGCCTGCC 22004 Query 55397 GACAAGGGACTTCTCCAGTTCGATCTATGGGGCAAGTCTGACCCCATGTTTGA-CAAGTT 55455 |||||| | |||||||||| | |||||| ||| ||||| | || | | || Sbjct 22005 AGCAAGGGTATCTTCCAGTTCGACATGTGGGGC--GTC--ACCCCGTCTTCGGGCTTGTG 22060 Query 55456 G---------------AAGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGT 55500 | ||| | || | | | ||| | |||||||| || ||||| Sbjct 22061 GGATTGGGCTGCGCTCAAGGAGAACGTGATCAAGCACGGCATCCGCAACTCGCTCCTCGT 22120 Query 55501 GGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCC 55560 ||| || ||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct 22121 GGCTCCGATGCCCACTGCGTCGACGGCTCAGATTTTGGGCAACAACGAGTCCATCGAGCC 22180 Query 55561 GTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATC---AA 55617 ||||||| | ||||| ||| ||||| || || ||||||| ||| |||| || Sbjct 22181 GTACACGTCGAACATGTACAACCGCCGCGTGCTGGCTGGTGAGT---TCACGATCGTGAA 22237 Query 55618 CAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGAT---CAAGAC 55674 |||| ||||| | ||||| ||| || | || |||| || || | ||| | Sbjct 22238 CAAGTACCTCATGAAGGAGCTGATCGAGCTGGGCATCTGGACGCCTGAGGTGCGCAA-CC 22296 Query 55675 GGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGA---GATTCCTCTGCGTCTCAA 55731 ||| || || | |||| || ||||| ||||| || | ||||| | |||| Sbjct 22297 AGATTCTG-GCTG-ACGGTGGCTCCGTGCAGAAGGTGAAATCCATTCCGGACCAGGTCAA 22354 Query 55732 GGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGA 55791 ||||| ||| ||||||||||||||| |||||| || | ||| || || || Sbjct 22355 GGAGAAGTACAAGACGGTGTGGGAGATCAAGCAGAAGGCCGTGTTGGACCTGTCGGCGGA 22414 Query 55792 TCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACT 55851 ||||| || ||||| |||| |||||| |||||||| ||| | | || | | Sbjct 22415 CCGTGGCGCCTACATTTGCCAGAGCCAGTCGCTGAACATTCACATTGCCGACCCGACGAT 22474 Query 55852 GGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTA 55911 |||| ||| || |||||||| |||| ||||||||||| ||||||||||| ||||| Sbjct 22475 TAGCAAGCTGACGTCCATGCACTTCTACGCCTGGAAGAAGGGGCTCAAGACGGGCATGTA 22534 Query 55912 CTATCTGCG 55920 ||| |||| Sbjct 22535 CTACATGCG 22543 >seq3929 Length=1496 Score = 154 bits (170), Expect = 2e-32 Identities = 560/860 (65%), Gaps = 25/860 (3%) Strand=Plus/Minus Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515 ||| || || || || || ||||| || || ||||||||||| || | || |||||| | Sbjct 1262 CTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCAT 1203 Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATA--GGCTTCTCCCCAAACTGTGC- 74572 |||||||||||||| |||||||| | ||| || || | | ||| | || | Sbjct 1202 ATCCATCCAGTCGAACGGGTTCTTCACGTTGTAGATCTTGGATGCACCC---AGTGAGTA 1146 Query 74573 CATGAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGAT 74632 || ||||| || ||||| || | |||||||| ||| | | | ||||||||| Sbjct 1145 CAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCAGAGTTCATGCCGAT 1086 Query 74633 GAGTTTGCACGGC-AGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGA 74691 || | ||||| || | ||| | | ||||| ||| | | | ||| | | Sbjct 1085 CAGCTC-CACGGGGAGCGAGTCGCTCACGAACTCGTGCTCAATCACCACAGCGTCACGCA 1027 Query 74692 CAATCTTGTGAATG----TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAA-GCGT 74746 | ||| ||| | | ||| || || ||| | | || | ||||| | | | Sbjct 1026 CGATCGCGTGCACGCGGCTCTCCGGCAG----CTTGTTCACCAACTTCGAGTACATGAGG 971 Query 74747 CACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAG 74806 |||| | || ||| ||| ||| || || | ||| || | || ||||| || || Sbjct 970 CACG-CGAAGTCCGTGTGCATGCCCTCGTCCCGGCTGATGAGCTCGTTCGAGAAGCTCAG 912 Query 74807 GCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAA 74866 |||||||| || || |||||||| | ||| ||||||| ||||||||||| |||||| Sbjct 911 ACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAACCCGAGAAGAA 852 Query 74867 GATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAG--TC 74924 ||||| || || || || || | || || | || | | | | | | || || Sbjct 851 AATGCCCTCCACGGCGGCGAACGCCAGCAGACGCTCCGGGTAGGACGAAACACGAGGGTC 792 Query 74925 ATCCAAGTCTGAGC-CCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTT 74982 | | | | ||||| || | | ||| | | |||| |||| || ||||| || Sbjct 791 ACACCACT-TGAGCGCCCAGCGGGCCTTCTTCTCCACGCACGGGATCGTCTCGATGGCAC 733 Query 74983 GGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042 | | | | ||||||| ||| ||||||| | | |||| |||| || |||||| Sbjct 732 GCAGCAAGTGATCCTTCTCCACGGCGTCCTTGATGTACGTGTCGATCAGCAGCGAGTACA 673 Query 75043 TCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101 |||||| || || |||| || ||| |||| | ||||||| | || ||||| | Sbjct 672 CCTCCGAGTGGATGTTCTCGATGG-CGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGC 614 Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161 | || || || || || ||||| | | ||||| | ||||||||||| ||| Sbjct 613 ACTTGCACCTCATTGCTGAAGTTCATCGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCA 554 Query 75162 GCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAA 75221 ||||| || || || || ||||| ||||||||||| | ||| || || || |||| Sbjct 553 GCGAAGAATGCTAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTCAGGTTCCCCCAG 494 Query 75222 TCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTT 75281 ||||||||||| | ||| || | ||||||| |||||||||| | | |||||| Sbjct 493 TCCTTCAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTC 434 Query 75282 TTGTACAAAGACCACAAGTC 75301 ||||||| ||||| ||| Sbjct 433 TTGTACATCTGCCACACGTC 414 >seq417 Length=24991 Score = 152 bits (168), Expect = 6e-32 Identities = 311/452 (69%), Gaps = 15/452 (3%) Strand=Plus/Minus Query 117149 AACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAG 117208 ||||| || ||||| ||||| |||||||||| || | |||||| | || ||| |||||| Sbjct 13521 AACCC-GTACCGATCCCCTCCGCACCATTCACGAGCAGCATCGGGATGATAGGCACGTAG 13463 Query 117209 AACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTC 117268 | |||| || || | | ||| ||||| ||||| | | ||||| ||| ||| Sbjct 13462 TGCACAGGTTCAACTGGGAAACCATCGTCGTCTGCGTACCGCAATAGCGCATCGTC-CTC 13404 Query 117269 GGATCGAATATGTTCTTGGTCCACGGTGCT-----AGGCGAGTGAAAATGTAACGAGAGC 117323 ||| | | | | | | ||||| || | ||||| |||||||||| || Sbjct 13403 C--TCGGGAAAGAGCAAG--CGAGTGTGCTTTTGGAGCAGCGTGAAGATGTAACGAGGGC 13348 Query 117324 TTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGT 117383 | || ||||||||||| || ||||| ||||||||||| || || | ||| || Sbjct 13347 TAGCGGCATCCTTGCCTCCTTGCAGACGGGTACCGAATTGACCTGAAGGATACAACAGCG 13288 Query 117384 TCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCG 117443 |||||||||| ||||| || | || |||| |||||||||||| || || | Sbjct 13287 GAAGGTTGTTGGATCCCACGAAATCCTGCGCCATGTTGACAATCGTCGAGTGCAGTGAAG 13228 Query 117444 CCTCACCATGGTGATACGCCGTCTGCTC-CGCCACGTAGCCCGCCAGCTGAGCCACCTTC 117502 | || |||||||| || ||||| ||||| | || ||||||||||||||| |||||||| Sbjct 13227 CTTCGCCATGGTGGTAAGCCGTATGCTCACTGCA-GTAGCCCGCCAGCTGTGCCACCTTA 13169 Query 117503 ATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTC 117562 | || ||| || || || ||||| || ||| |||||| ||||| |||| Sbjct 13168 ACCTCGCTCGTTAGCTTGCGTTTCAGGCATGCGAAAAGCACCTTACGCTGCGAGATCTTC 13109 Query 117563 AGACCATCCGCCACGTGAGGG-ATCGAACGCT 117593 || || || |||| ||||| | ||| |||| Sbjct 13108 AGGCCGTCAACCAC-CGAGGGCAGCGATCGCT 13078 Score = 143 bits (158), Expect = 3e-29 Identities = 196/274 (72%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086 ||||||||||||| || | ||| || ||||||||||| ||| ||| || || || || | Sbjct 13368 GCGTGAAGATGTAACGAGGGCTAGCGGCATCCTTGCCTCCTTGCAGACGGGTACCGAATT 13309 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | || || || | | || |||||||||| |||||||||| ||| |||| || | Sbjct 13308 GACCTGAAGGATACAACAGCGGAAGGTTGTTGGATCCCACGAAATCCTGCGCCATGTTGA 13249 Query 152147 CAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATC 152206 ||||||| ||||| ||||| || ||||| || ||||| ||||| | ||| | Sbjct 13248 CAATCGTCGAGTGCAGTGAAGCTTCGCCATGGTGGTAAGCCGTATGCTCACTGCAGTAGC 13189 Query 152207 CCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCA 152266 |||||| ||| |||||||| | || |||| || || || || || ||| ||| || Sbjct 13188 CCGCCAGCTGTGCCACCTTAACCTCGCTCGTTAGCTTGCGTTTCAGGCATGCGAAAAGCA 13129 Query 152267 CCTTGCGCTGGGATGGTTTCAAACCGTCCACCAC 152300 |||| ||||| || |||| ||||| ||||| Sbjct 13128 CCTTACGCTGCGAGATCTTCAGGCCGTCAACCAC 13095 >seq2669 Length=2431 Score = 118 bits (130), Expect = 1e-21 Identities = 230/331 (69%), Gaps = 19/331 (6%) Strand=Plus/Plus Query 124518 CCCGTGCCAATCACGAAATCTTCGGGAATCGACTGC-TGCAACATAAGCCACATGGCTTG 124576 || ||| | | |||||| || ||||| ||| | | |||| ||| |||||||| | | Sbjct 1177 CCGGTGGCCAGCACGAAGTCCTCGGGC-TCGTCCACCTGCAGCATGCGCCACATGCCCTC 1235 Query 124577 GACGTAGTCCTCTGCGTGCCCCCAGTCGCGCTTGGCATCCAGGTTTCCGAGCTCGAT-TG 124635 || || || | |||| ||||||||||| ||||||||| ||| || | | | || Sbjct 1236 CACATACTCGGCGGCGTAGCCCCAGTCGCGGATGGCATCCAAGTTGCCCATGTACAGGTG 1295 Query 124636 -----GCTTGGCCGTCTTGTTCCACTCCGCCAAACCCAGTGTAATCTTGCGCGTCACAAA 124690 ||||| ||| | || | |||| | | || |||||||| ||||| || Sbjct 1296 CTCCTGCTTGCCCGCGGCGATCG---CGGCCACGGCGCGCGTGATCTTGCGGGTCACGAA 1352 Query 124691 ---CTCGGAACCGCGTCGCTCAGACTCGTGGTTGAACAGAATGCCAGTACA-CGCAAACA 124746 |||| ||||| ||| |||||||||||||| || || || || || ||| |||| Sbjct 1353 GGTCTCG---CCGCGCCGCGGGGACTCGTGGTTGAAGAGGAT-CCCGTTCACCGCGAACA 1408 Query 124747 TCCCGTACGACTCGCGGTAGTTTTTCGTCATCCAATACCCAAAGAGCTTGGACACGCCAT 124806 | |||||| |||||||||||| || || ||||| ||| | ||| ||||| | |||| | Sbjct 1409 TGTCGTACGCCTCGCGGTAGTTCTTGGTGATCCAGTACGAATAGATCTTGGCCGCGCCGT 1468 Query 124807 AGGGGCTTCGGGGGTAGAATGGGGTGTTTTC 124837 | || || |||||||| |||||||| || Sbjct 1469 ACGGCGAGCGCGGGTAGAACGGGGTGTTCTC 1499 >seq272 Length=33112 Score = 102 bits (112), Expect = 9e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||| || || || | |||||| | |||||||| || ||| ||||| || ||||| Sbjct 23379 GTGAAAATATAACGAGCGCTGGCAGAGTCCTTGCCGCCCATCAGACGCGTACCGAACTGA 23438 Query 152089 CC-AGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 || | ||| | || |||| || |||||| || ||||||| ||| |||| ||||| Sbjct 23439 CCGATAGGAGAC-AGAAGGTGGATGTTGTTACTTCCAACGAAATCCTGCGCCATGTTCAC 23497 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 || ||| |||| |||| || ||||| || ||||| | ||||||| | || || Sbjct 23498 GATACAGCCTTGCAAACTCTGCTCTCCGTGATGGTACGCAGAGTGCTCCGAAACATAGCC 23557 Query 152208 CGCCAACTGCGCCACCTT 152225 ||||||||||||||||| Sbjct 23558 AGCCAACTGCGCCACCTT 23575 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 |||||||| ||||||| ||| |||| |||||||| || |||||||||||||| || Sbjct 23379 GTGAAAATATAACGAGCGCTGGCAGAGTCCTTGCCGCCCATCAGACGCGTACCGAACTGA 23438 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || | || || |||| | |||||| || || || | || |||| ||| || Sbjct 23439 CCGATAGGAGACAGAAGGTGGATGTTGTTACTTCCAACGAAATCCTGCGCCATGTTCACG 23498 Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484 || ||||| | ||| ||| || || || ||||| | ||||||| || ||||| Sbjct 23499 ATACAGCCTTGCAAACTCTGCTCTCCGTGATGGTACGCAGAGTGCTCCGAAACATAGCCA 23558 Query 117485 GCCAGCTGAGCCACCTTCATGTCTGAC 117511 |||| ||| |||||||| | |||||| Sbjct 23559 GCCAACTGCGCCACCTTAAGCTCTGAC 23585 >seq30 Length=82662 Score = 87.8 bits (96), Expect = 2e-12 Identities = 179/262 (68%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 158927 CACATGCGAAAACAATAAACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGT 158986 || |||||| | | |||||| || | || || |||||| || |||| ||||| | Sbjct 41594 CAAATGCGAGCTCCACAAACTCACGAACACTATGACACTCTCCGGTGGCAACAACAAAAT 41653 Query 158987 CCTCTGGACCGGGCTGTTGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGAC 159046 ||| ||| | ||||| |||||| |||||||| || || || || | ||||| | Sbjct 41654 CCTGTGGCGTGTCGTGTTGAAGCATGCGCCACATGCATTCCACATAGTCACGGGCGTGGC 41713 Query 159047 CCCAGTCGCGCTTGGCATCCATGTTCCCGAGCTCGATG-ACTTTTCCAGACTTTTTCCAC 159105 ||||||| ||||||||||||| ||| || | || | || | || | | | | Sbjct 41714 CCCAGTCACGCTTGGCATCCAGGTTGCCCACAAAGAGGCACCTCTCAATCCCCGCACGAA 41773 Query 159106 TCAGCCAGACCG--AGCGTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGA-- 159161 | || |||| ||||||||||||| ||||| || || |||||| || | || Sbjct 41774 TGCGCACCACCGCACGCGTGATCTTGCGGGTCACGAAGGTTGGTCCGCGTCG--CGGACT 41831 Query 159162 CTCATGGTTAAACAGAATGCCG 159183 ||| ||||| |||||||| ||| Sbjct 41832 CTCGTGGTTGAACAGAATCCCG 41853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547179213404400