Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933465.1_202017-01-04] 5,378 sequences; 40,428,501 total letters Query= NC_028869.1 Length=153714 Score E Sequences producing significant alignments: (Bits) Value seq2959 93.3 4e-14 >seq2959 Length=2134 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 113798 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 113857 || || |||||||| |||| | || || |||| | |||| |||| |||||||| | Sbjct 1032 GGTCCCGGCCGTGGTTCCGGTGCCGGTTCCATGGTGGCGTACGCCATGCGCATCACCGAG 973 Query 113858 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGAC 113917 | ||||| || | ||| ||||| |||||||||||| |||||||||||||| | Sbjct 972 CTGAACCCGCTCGCGCACGGGCTGATCTTCGAGCGCTTCCTCAACCCGGACCGCGTGTCC 913 Query 113918 TTCCCCGACATCGACGTCGACTTC 113941 | |||||| ||||||| |||||| Sbjct 912 ATGCCCGACTTCGACGTGGACTTC 889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 491723741649120