Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933465.1_202017-01-04] 5,378 sequences; 40,428,501 total letters Query= NC_028890.1 Length=162486 Score E Sequences producing significant alignments: (Bits) Value seq3143 84.2 2e-11 >seq3143 Length=1992 Score = 84.2 bits (92), Expect = 2e-11 Identities = 61/70 (87%), Gaps = 2/70 (3%) Strand=Plus/Plus Query 28188 GGGTGTAGCTCAGATTGGCTAGAGCGCTTGCTTTGGGAGCAAGAAGTCGCAGGTTCAAGT 28247 ||||||||| ||| ||||||| |||| ||||||||||||| || |||||||||| ||| Sbjct 628 GGGTGTAGCGCAG--TGGCTAGCGCGCCTGCTTTGGGAGCAGGAGATCGCAGGTTCGAGT 685 Query 28248 CCTGTCACCC 28257 |||||||||| Sbjct 686 CCTGTCACCC 695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519792254616480