Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933465.1_202017-01-04] 5,378 sequences; 40,428,501 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq3143 91.5 2e-13 >seq3143 Length=1992 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 160905 ACGGGGTGTAGCGCAGAGG-TAGCGCGGCTGTTTTGGGAACAGCAGGTCGCAGGTTCGAT 160963 |||||||||||||||| || ||||||| ||| ||||||| ||| || |||||||||||| Sbjct 625 ACGGGGTGTAGCGCAGTGGCTAGCGCGCCTGCTTTGGGAGCAGGAGATCGCAGGTTCGAG 684 Query 160964 CCCTGTCACCCCGAC 160978 |||||||||||||| Sbjct 685 TCCTGTCACCCCGAC 699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557616911682960