Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001955675.1_202017-01-18] 5,959 sequences; 40,766,767 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq174 302 4e-77 seq4140 203 3e-47 seq257 161 9e-35 seq678 158 1e-33 seq36 131 1e-25 seq961 127 2e-24 >seq174 Length=41746 Score = 302 bits (334), Expect = 4e-77 Identities = 991/1524 (65%), Gaps = 29/1524 (2%) Strand=Plus/Plus Query 22466 AACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525 ||||| || | || |||||||| | ||| ||||| || ||| |||| |||| || || Sbjct 19522 AACTCACCAGCCAGCACGCGGCGGTTGTACATGTTCGACGTGTACGGCTCGATGGACTCG 19581 Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585 ||||| |||| |||||||| ||||| || || |||||||| |||| || |||||||| Sbjct 19582 TTGTTGCCCAAAATCTGAGCCGTCGACGCAGTGGGCATCGGAGCCACGAGGAGCGAGTTG 19641 Query 22586 CTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACA-GATCG--GAC 22642 | | ||||||||| | || ||||||| | ||| ||||||| | || ||| Sbjct 19642 CGGATGCCGTGCTTGATCACGTTCTCCTTGAGCGCAGCCCAATCCCACAAGCCCGAAGAC 19701 Query 22643 GGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCG 22702 || || || | ||||||| ||| | || || | || || || || || | | Sbjct 19702 GGGGTGAC---GCCCCACATGTCGAACTGGAAGATACCCTTGCTGGCAGGCGATCCCTGG 19758 Query 22703 TACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGC-CTCCAACGCGCCGTA 22761 |||| |||||||| || | ||| | || || | | ||||| | |||| Sbjct 19759 AACGTCTCGTACGGGCCCAGCTCCTTGGCGATCTC-CATCGAGGTCTCCATAGAAGCGTA 19817 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCG-GCGACGCTTTCGTACGGCA 22820 || || ||||||||||| ||| |||| | ||| ||| ||| ||| ||| ||| || Sbjct 19818 GTAGATCGTCTCGAAGATGTTCATGTTGAGTTCACGGGCTTGCGG-GCTCTCGAACG-CA 19875 Query 22821 TACG-CATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTT 22879 || ||| | | || || ||||| | |||||| ||||| ||||| | ||| |||| Sbjct 19876 TAGTTCATGAGGATAAATGCATCCGCGAGACCCTGGACGCCAATACCAACCGGGCGGTGG 19935 Query 22880 TTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTC 22939 || || ||| ||||| || || || | || || || ||||| Sbjct 19936 CGCATGTTGGACTTGCGCGCCTCCTCCACGGGGTAGTAGTTGACGTCAATGACCTTGTTC 19995 Query 22940 AAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT 22999 ||||| | |||||| | || || | | ||| | | || || || Sbjct 19996 AAGTTCCGGGTCACCACCTTGGTCACCTCGTACAGCTTCTGGTAGTTGAACACTCC--AT 20053 Query 23000 TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTG 23059 | || |||||||| || ||| | || || || ||||| || |||||||| || Sbjct 20054 CCTCCA-CAAACTTGGGGAGGGCCACAGACGCCAGGTTGCACACCGCCACCTCATCGGGC 20112 Query 23060 GACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTC 23119 ||||||||||| | ||| ||| || | ||||| | |||||||| | || | Sbjct 20113 GACGTGTACTCCATAATCTCGCAGCACAAGTTGCTCGAGCGGATCGTGCCGAGGTTCTGC 20172 Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179 ||||| || || ||| || |||||||| |||||| ||||| ||||||||| | | Sbjct 20173 TGGTTCGACTTGCGGTTGGCCGCGTCCTTGTACAGCATGAACGGCACGCCCGTCTCAATC 20232 Query 23180 TGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT-GAACACGTCGCACGTACCTGCC 23238 |||| || | ||| || ||||| ||| || | || | | || || | || Sbjct 20233 TGCGCGTCCAGGATGGCGAACCACAGCTGCTGGGCATTGATCGTCTTGCGCGCGCGCCCC 20292 Query 23239 TTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCC 23298 | |||| |||||||| | ||||| | || || ||| | || | || ||| || || Sbjct 20293 TCCTTC-TCGTACTTCTCGTACAGAGTCTCGAACTCGTCGCCCCAGCACTCGTAGAGTCC 20351 Query 23299 GGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAA 23358 ||| | | | || || | || |||||| | || ||| || || |||| || Sbjct 20352 GGGGGCCTCATTGGGGCAGAAAAGGCTCCACTTGCCGTTCGCTTCCACACGCTTCATGAA 20411 Query 23359 AAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGT 23418 ||||| || | ||| ||||||||||| || ||||| ||||| | ||| |||||| Sbjct 20412 CAGATCGGGGACCCACAGAGCGTAGAAGAGGTCGCGCGCGCGGTGCAGCTCGTTGCCGTG 20471 Query 23419 GTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGC 23478 |||||| || |||| || || |||||||| || ||||||||||| ||||| | ||| Sbjct 20472 GTTCTTGCGCAGCTCCAGGAACTCGAACACGTCAGCGTGCCACGGCTCCAGGTAGATGGC 20531 Query 23479 AAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACAC 23538 |||| ||| | ||| || ||||| || || || |||||||||| ||| | || Sbjct 20532 GAACGAGCCTTTGCGCTTGCCTCCTCCCTGGTCCACATAGCGGGCCGTGTCATTGAAGAC 20591 Query 23539 TCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTT 23598 || ||||| || | || |||||||| | ||| | || ||| | | | || | Sbjct 20592 CCTCAGCATGGGGATGATCCCGTTGGATGATCCG--TTCG--TGCCGCGGATGTAGCTGT 20647 Query 23599 T----GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654 | || || | |||||| | | || || |||||| || | || || || || Sbjct 20648 TCGTGGCGCGGATGTTGTGCATACTAATGCCAATACCTCCGGCCCACTTGGAGATGCACG 20707 Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714 |||| || || || |||||||| |||||||| || ||| || | | || | || || Sbjct 20708 CGCACTGCTTGAGCGTGTCGTAAATGCCCTCAATCGAGTCGTCCTGCATGGCCAGCAGGA 20767 Query 23715 AACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCG 23774 ||||||| |||| |||| ||||| |||| || || || || | ||||||| Sbjct 20768 AACACGACGACAGCTGCGGACGCGGCGTGCCGGCGTTAAAGAGCGTGGGCGTCGCGTGCG 20827 Query 23775 TAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGT 23834 ||||| | | ||||| || | ||||||| | || || | ||||| | || Sbjct 20828 TAAAGAACATCTGTGACATGAGCTCATACGTGTGCAGTGCCGCCTGGATGTCTTGCTTGT 20887 Query 23835 GTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC--CGTGACGCCGTT 23892 | ||||| | || |||||||| ||||| | || || | ||| || | | | ||||| Sbjct 20888 GAATACCCAGCGCCACGCGCATGATCATCTGCTGGGGGCGCTCCACGACCTTA--CCGTT 20945 Query 23893 AATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTC 23952 | ||| || || || | | ||| || || || || ||||| || | |||||| Sbjct 20946 CACGCGGAAGAGGTAGCCTCGCTCAAGCGTCTTGAAGCCGAAGTAGTCGTACTCAAAGTC 21005 Query 23953 ACGATCGTGCACTATGGCCGAATT 23976 || ||||| | |||||||| || Sbjct 21006 CCGGTCGTGGATGATGGCCGAGTT 21029 >seq4140 Length=1496 Score = 203 bits (224), Expect = 3e-47 Identities = 561/842 (67%), Gaps = 30/842 (4%) Strand=Plus/Plus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 ||| | ||| | |||||||| ||||| || || ||||| ||||| | ||| || | ||| Sbjct 414 GACGTGTGGCAGATGTACAAGAAGGCGGAGGCGTCGTTCTGGACGGCCGAGGAGCTGGAC 473 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 ||| | || |||| || |||| ||| | || ||| | | || || || Sbjct 474 CTGGTGCACGACCTGAAGGACTGGGGGAACCTGACGGACAACGAGCGCCACTTCATCAAG 533 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 |||||| | || || ||||| || ||| || || || |||||||| ||| ||| || Sbjct 534 CACGTGCTAGCATTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGG-CGAT-GA 591 Query 57747 TTTTCA-CAA-GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 |||| ||| || ||||||||| ||||||| | ||||| ||||| || || | |||| Sbjct 592 ACTTCAGCAATGAGGTGCAAGTGCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCGCCA 651 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || ||| | || || || |||| ||||| || ||||| |||||| | |||||| || Sbjct 652 TCGAGAACATCCACTCGGAGGTGTACTCGCTGCTGATCGACACGTACATCAAGGACGCCG 711 Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCA 57923 ||||| | || | || ||||| || || || ||| | | |||||||| Sbjct 712 TGGAGAAGGATCACTTGCTGCGTGCCATCGAGACGATCCCGTGCG-TGGAGAAGAAGGCC 770 Query 57924 GAGTGGTCAATCAAATGGATAAAAA---GCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980 ||| | |||| ||| | | | || || | | | ||| | || | Sbjct 771 CGCTGGGCGCTCAAGTGGTGTGACCCTCGTGTTTCGTCC---TACCCGGAGCGTCTGCTG 827 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGAT 58039 |||||||||||||| || || || ||||| ||||| ||| ||| | || || ||| | Sbjct 828 GCGTTCGCCGCCGTGGAGGGCATTTTCTTCTCGGGTTCCTTCTGC-TCCATCTTCTGGCT 886 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||||| |||||||| ||||| || |||| || |||||| | || || ||||| Sbjct 887 CAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGGGACGA 946 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG 58159 ||| | || || || || |||||||| |||||||| | | || || || | || Sbjct 947 GGGCATGCACACGGACTTCGCGTGCCTCATGTACTCGAAGTTGGTGAACAA---GCTGCC 1003 Query 58160 GGATCGCATCTTGGAC---ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 ||| || | || || || | || || || | ||| || | ||||| || | Sbjct 1004 GGAGAGCCGCGTGCACGCGATCGTGCGTGACGCTGTGGTGATTGAGCACGAGTTCGTGAG 1063 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 ||| | || || |||| || |||| |||||| || | |||| ||||||| || Sbjct 1064 CGACTCGCTCCCCGTGGAGCTGATCGGCATGAACTCTGCGCTCATGTGCCAGTACATCGA 1123 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTC----AT-TACAACACG 58331 ||| || |||||| | | |||| | ||| | ||| | || || || |||||| | Sbjct 1124 GTTCGTGGCCGACCGCC---TGCT-GTACTCACTGG-GTGCATCCAAGATCTACAACGTG 1178 Query 58332 AAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAA 58391 || || ||||| || | ||| || |||||||||| |||||||||| ||||| ||||| Sbjct 1179 AAGAACCCGTTCGACTGGATGGATATGATCTCGCTGCAGGGCAAGACCAACTTCTTCGAG 1238 Query 58392 AA 58393 || Sbjct 1239 AA 1240 >seq257 Length=32862 Score = 161 bits (178), Expect = 9e-35 Identities = 178/236 (75%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243 ||||||| ||||| || ||||| |||||| |||| ||||| ||||||||| | ||||| Sbjct 579 GAATCAAG-ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTG 521 Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303 || ||||| ||| |||| | || || |||| ||| ||||||||||||| | ||| Sbjct 520 GAGCCGTCAGACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCG 461 Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC 31363 || ||||||||||| || || ||||||||||| ||| | |||||| || ||||| Sbjct 460 CCTGACCAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGC 401 Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || || ||||| || || || ||||| || | ||| | ||||| Sbjct 400 GACTACAACATCCAGAAGGAATCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 345 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||| |||| ||||| ||||||||| | ||||| || ||||| Sbjct 344 CATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTC 285 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| ||| ||||||||||||| | ||||| ||||| Sbjct 284 AGACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCA 225 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||||||||| ||| | |||||| || ||||||| || || Sbjct 224 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAA 165 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || || || || ||||| || | ||| | ||||| Sbjct 164 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 117 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||| |||| ||||| ||||||||| | ||||| || ||||| Sbjct 116 CATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTC 57 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305 ||| |||| | || || |||| ||| ||||||||||||| | ||||| Sbjct 56 GGACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCC 3 >seq678 Length=15758 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||| |||| ||||| ||||||||| | ||||| || ||||| Sbjct 15307 CATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTC 15248 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| ||| ||||||||||||| | ||||| ||||| Sbjct 15247 GGACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCA 15188 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||||||||| ||| | |||||| || ||||||| || || Sbjct 15187 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAA 15128 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || ||||| || || || ||||| || | ||| | ||||||| Sbjct 15127 CATCCAGAAGGAATCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGTA 15078 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||| |||| ||||| ||||||||| | ||||| || ||||| Sbjct 15535 CATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTC 15476 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| ||| ||||||||||||| | ||||| ||||| Sbjct 15475 AGACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCA 15416 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||||||||| ||| | |||||| || ||||||| || || Sbjct 15415 GCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAA 15356 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || || || || ||||| || | ||| | ||||| Sbjct 15355 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 15308 Score = 147 bits (162), Expect = 2e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 31199 ATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGT 31258 || ||||| |||||| |||| ||||| ||||||||| | ||||| || ||||| ||| Sbjct 15756 ATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCAGACTCG 15697 Query 31259 GTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318 |||| | || || |||| ||| ||||||||||||| | ||||| ||||||||||| Sbjct 15696 ATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGC 15637 Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAA 31378 || || ||||||||||| ||| | |||||| || ||||||| || ||||| || Sbjct 15636 CTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAACATCCAG 15577 Query 31379 AAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || ||||| || | ||| | ||||| Sbjct 15576 AAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 15536 >seq36 Length=76722 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 |||||||| || ||||| ||||| |||| ||||| || ||||| | ||||| || || Sbjct 56398 AACATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCT 56457 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || ||| |||| | || || |||| ||| |||||||| ||| | ||||||||| Sbjct 56458 TCGGACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGAC 56517 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||| ||||| ||| |||| ||| | || ||||||| || Sbjct 56518 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTAC 56577 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || |||| || Sbjct 56578 AACATCCAGAAGGAGTCTACGCTGCACTTGGTGCT 56612 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| |||| ||||| || ||||| | ||||| || || || Sbjct 56628 CATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTC 56687 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| ||| |||||||| ||| | ||||||||||| Sbjct 56688 GGACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCA 56747 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| |||| ||| | || ||||||| || || Sbjct 56748 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 56807 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || || || |||| || Sbjct 56808 CATCCAGAAGGAGTCTACACTGCACTTGGTGCT 56840 >seq961 Length=10404 Score = 127 bits (140), Expect = 2e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || |||||| || || || ||||| ||||| ||||| || ||||| | ||||| || || Sbjct 6823 AATCATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTAGAGCC 6764 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||||| | || | ||||| |||| ||| ||||||||||||| | ||||| || Sbjct 6763 GTCCGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGA 6704 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||| || || ||||| ||||| ||| | || ||| Sbjct 6703 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGAC 6664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445733195975280