Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001955675.1_202017-01-18] 5,959 sequences; 40,766,767 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq5255 87.8 3e-12 >seq5255 Length=1150 Score = 87.8 bits (96), Expect = 3e-12 Identities = 58/63 (92%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 |||||| |||||||| ||| ||||||||||||||||||||||||||||||||| || ||| Sbjct 1056 TGTAGCGCAGTTGGT-TAGCGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCAAGTCCC 1114 Query 169792 GTC 169794 ||| Sbjct 1115 GTC 1117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777574076136400