Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001955675.1_202017-01-18] 5,959 sequences; 40,766,767 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq625 315 9e-81 seq257 149 8e-31 seq678 143 4e-29 seq129 122 1e-22 seq961 118 1e-21 seq36 116 5e-21 seq316 102 1e-16 >seq625 Length=16992 Score = 315 bits (348), Expect = 9e-81 Identities = 1031/1584 (65%), Gaps = 26/1584 (2%) Strand=Plus/Minus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 || ||||| | || || || ||||| || || || || ||||| || || || || ||| Sbjct 5684 GGCATCGACCTGGGCACGACCTACTCGTGCGTGGGCGTGTGGCAGAACGACCGCGTGGAG 5625 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || ||| | || ||||| || ||||| || || || || ||||| ||||| || || | Sbjct 5624 ATCATCGCCAACGACCAGGGCAACCGCACGACACCGTCCTACGTGGCCTTCACGGACACG 5565 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || || || | || || || || || || ||| || |||||| | ||| || || Sbjct 5564 GAGCGCCTTATCGGCGACGCGGCCAAGAACCAGGTGGCCATGAACGCGCACAACACGGTG 5505 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 ||||| | |||||| | || || |||||||| | || |||| || || || Sbjct 5504 TTTGATGTCAAGCGTTTGATCGGGCGCAAGTTCACCGACCCTGAAGTGCAGTCGGACATC 5445 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAA 195604 | | ||||| | | | |||| | || ||| || ||||||| | | || || | Sbjct 5444 AGGCACTGGCCGTTTAAAGTGGCTCGAGGTCCGGAGAATAAGCCGGA-AGTGGTGGTGCA 5386 Query 195605 TTTCAC-GGTGAGAAGAAACAATTTGCT-CCCGAAGAAATTTCGTCTATGGTGTTGATTA 195662 |||| |||||| || | ||| | ||||| || || ||||| |||||| || | | Sbjct 5385 GTTCAAAGGTGAGCAGGTG-ACTTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGGTCA 5327 Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 ||||| |||| ||||| ||| ||| ||||| ||||| | ||||| ||||| | Sbjct 5326 AGATGCGCGAGATCGCGGAGGCTTACATTGGTAAGCAGGTGAAGAACGCAGTGGTGACGG 5267 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || ||||||||||| || || || | || ||||| | Sbjct 5266 TGCCGGCCTACTTCAACGACTCGCAGCGACAGGCGACCAAAGATGCCGGTGTCATTGCTG 5207 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 || | ||| || | || ||||| || || ||||| || || ||||| || ||||||| Sbjct 5206 GTTTGAACGTGCTGCGTATCATCAACGAGCCGACAGCCGCCGCTATTGCCTACGGTCTGG 5147 Query 195843 ACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTG 195902 ||||| |||| | ||| | || || ||||||| || || || || || || || | Sbjct 5146 ACAAG---AAGGGTGGAGAGCACAACGTGCTGATCTTCGACCTGGGCGGCGGCACCTTCG 5090 Query 195903 ATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATA 195962 |||| || ||||| | |||||||| || || ||||| || ||||| || ||||| || | Sbjct 5089 ATGTGTCGCTTCTAACTATTGAAGACGGCATCTTCGAGGTGAAGGCCACCGCTGGCGACA 5030 Query 195963 CTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGAGTTC 196021 | || || || || ||||| ||||| || || || || ||||| | || ||| Sbjct 5029 CGCACCTGGGCGGCGAAGACTTCGACAACCGCCTCGTCGAGTTCTTTGT-GCAAGAATTC 4971 Query 196022 CGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACT 196081 || ||| || || ||||| | | || | | || || || || || | || Sbjct 4970 AAGCGCAAGCATCGCAAGGATATGACGGTGAACTCGCGCGCGCTGCGGCGTCTGCGTACG 4911 Query 196082 GCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGAT 196141 || || || |||||||| || || || || | || ||| | | |||||||| Sbjct 4910 GCGTGCGAGCGTGCCAAGCGTACACTGTCGATGTCTGCGCAAGCGTACATCGAGATTGAC 4851 Query 196142 TCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTA 196201 ||| || | || || | || ||| | | || ||||| || || || || || || | Sbjct 4850 TCGCTGCTGGATGGTGTCGATTTCAACTCTACCATTACGCGCGCGCGGTTCGAGGATCTT 4791 Query 196202 AACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAG 196261 ||| || ||| | ||| ||||| || || | || || || || ||| | ||| Sbjct 4790 TGTGGTGAATTCTTTCGCAAGACAATGGACCCAGTGGCGCAGGTTCTACGAGACTCGAAG 4731 Query 196262 ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAG 196321 || ||| |||| | || | || || ||||| || || || ||||| |||||| Sbjct 4730 CTGTCGAAGAGCCAGGTGAACGAGGTGGTGCTAGTGGGCGGCTCGACTCGTATCCCGAAG 4671 Query 196322 ATTCAACAGATGCT-TTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCC 196380 | || ||| || | || | ||| ||||| ||| | | ||| | |||||||| Sbjct 4670 GTGCAGCAGTTGTTGATCGA-CTTTTTCAACGGTAAGAAGCTCTTCAAGTCCATCAACCC 4612 Query 196381 GGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAA 196440 ||| ||||| | || || ||||| | || ||||| || || || || |||| Sbjct 4611 GGACGAAGCCATAGCGTACGGTGCTACAGTGCAGGCGGCCATCCTGAGCGGCCATGAC-- 4554 Query 196441 TAATAACGTCCAA-------GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTC 196493 | | ||||||| || || |||||||| || || || || | || || || Sbjct 4553 TCGT--CGTCCAAGTTGCAGGACCTGCTGCTACTGGACGTGGCGCCGCTGTCTCTTGGCT 4496 Query 196494 TTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTA 196553 | || || || || || || ||||| || | || | ||||| || |||| | | Sbjct 4495 TGGAGACGGCTGGCGGAGTCATGACCAAGCTGATCCCGCGCAACACCACGGTTCCAGCCA 4436 Query 196554 AGAAGGAACAAGTC-TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTA 196612 |||||| | |||| || || ||||| | || || || | ||||| || ||||| Sbjct 4435 AGAAGGCGC-AGTCGTTCTCGACGTACGCGGACAACCAGTCCGGTGTCTTGATCCAAGTG 4377 Query 196613 TATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGATTTGAC 196671 | || || || || || | || || ||||| || || || ||| || ||| Sbjct 4376 TTCGAGGGTGAGCGTTCGATGACCTGTGACAATCATCTTCTGGGCAAGTTTAACTTGGAC 4317 Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731 || || || | || | ||||| || || ||| | || ||||| | || | Sbjct 4316 -GGCATCCCGCCCATGCCTCGCGGTGTGCCGCAAATTGACGTGACGTTCGACGTGGATGT 4258 Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791 || || ||| | ||||| | || | ||| ||| | | ||||| | ||||| | Sbjct 4257 CAACGGCATTTTGAACGTGTCGGCCGTGGAGAAGTCGACGGGCAAGGAGAACAAGATCAT 4198 Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || || || |||||||| ||| | ||| || || || || || |||||| | || || Sbjct 4197 CATCACGAACGACAAGGGCCGGTTATCTCAGTCCGAGATCGACCGCATGGTTGATGACGC 4138 Query 196852 GGAAAAGTACAGGGAAGAAGACGA 196875 || ||||||| ||| |||| || Sbjct 4137 TGAGAAGTACAAGGACCAAGATGA 4114 >seq257 Length=32862 Score = 149 bits (164), Expect = 8e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || | || || || || |||||| | || || ||| ||||| Sbjct 343 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCA 284 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 283 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 224 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 223 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 164 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||||||||| || ||||| || || Sbjct 163 ATCCAGAAGGAGTCTACGCTGCACCTGGTGCT 132 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || |||||| | || || ||| ||||| Sbjct 571 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCA 512 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 511 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 452 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 451 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 392 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| ||||| || ||||| || || Sbjct 391 ATCCAGAAGGAATCTACGCTGCACCTGGTGCT 360 >seq678 Length=15758 Score = 143 bits (158), Expect = 4e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || |||||| | || || ||| ||||| Sbjct 15534 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCA 15475 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 15474 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 15415 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 15414 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 15355 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||||||||| || ||||| || || Sbjct 15354 ATCCAGAAGGAGTCTACGCTGCACCTGGTGCT 15323 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || | || || || || |||||| | || || ||| |||| Sbjct 15306 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 15247 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || ||||| || ||||||||||| || || || ||| Sbjct 15246 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 15187 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || ||||||||||| || || || || || |||||| Sbjct 15186 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 15127 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||| ||||| || ||||| || || | || || || ||| Sbjct 15126 ATCCAGAAGGAATCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGT 15079 Score = 138 bits (152), Expect = 1e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 171868 ATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACA 171927 ||||| ||||| || | || || || || |||||| | || || ||| |||||||| | Sbjct 15756 ATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCAGACTCG 15697 Query 171928 ATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGA 171987 ||||| ||| | || || ||||| || ||||||||||| || || || ||||| || Sbjct 15696 ATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGC 15637 Query 171988 CTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAA 172047 || ||||| ||||| || ||||||||||| || || || || || |||||| | || Sbjct 15636 CTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAACATCCAG 15577 Query 172048 AAGGAGTCTACTCTACACCTTGTTCT 172073 ||||||||||| || ||||| || || Sbjct 15576 AAGGAGTCTACGCTGCACCTGGTGCT 15551 >seq129 Length=48195 Score = 122 bits (134), Expect = 1e-22 Identities = 208/298 (70%), Gaps = 13/298 (4%) Strand=Plus/Plus Query 198660 TTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCA 198719 |||||||| |||||||||||||| ||| | ||| || || || || || || | || Sbjct 43681 TTCATCGAAATGTTCGTTGGTGTGGGTCCCTCGCGTGTACGTGACCTGTTCAAGGAGGCT 43740 Query 198720 CGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTG-----GTAAGA 198774 || | || ||||| || | ||||| ||||| ||||| ||||| | | | || Sbjct 43741 CGCGCGAACGCTCCATGCATTGTGTTCATCGATGAAATTGATGCTGTGGCCCGTGCACGA 43800 Query 198775 AGCGTGGTGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAACCAGCTTC 198834 ||| || | |||| || | | || ||||| |||||||| | ||| | |||||||| | Sbjct 43801 AGCAAGG-GCAACTTCTCCGGC-GGCAATGACGAGCGTGAAAACACGCTCAACCAGCTGC 43858 Query 198835 TCACTGAGATGGATGGTTTTGAC---AATGAGACTGGTATCGTGGTGATTGCTGCTACAA 198891 | |||||||||||||| || | |||| ||| | |||||| |||||| ||| | Sbjct 43859 TGGTGGAGATGGATGGTTTCAACTCGAGTGAG---GGTGTGGTGGTGCTTGCTGGTACGA 43915 Query 198892 ATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGACCGTAAGAT 198949 | | ||||| || || | || | || |||||||||||||||||||| |||| Sbjct 43916 ACCGCGCCGATATTCTTGACAAGGCCATCCTGCGTCCCGGTCGATTCGACCGGCAGAT 43973 >seq961 Length=10404 Score = 118 bits (130), Expect = 1e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || ||||| || || || ||| |||| Sbjct 6819 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTAGAGCCGTCC 6760 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || |||||||||||||| || || ||| Sbjct 6759 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGACCAG 6700 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || ||| | || |||||| Sbjct 6699 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAAC 6640 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 6639 ATCCAGAAGG 6630 >seq36 Length=76722 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| | || Sbjct 56401 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 56460 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || ||||| ||| Sbjct 56461 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 56520 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 56521 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 56580 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | || || | || || ||||| Sbjct 56581 ATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 56627 Score = 116 bits (128), Expect = 5e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| | || Sbjct 56629 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 56688 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || ||||| ||| Sbjct 56689 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 56748 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 56749 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 56808 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||| | || || | ||||| || || Sbjct 56809 ATCCAGAAGGAGTCTACACTGCACTTGGTGCTGCGTCTTCGCGGCGG 56855 >seq316 Length=29302 Score = 102 bits (112), Expect = 1e-16 Identities = 384/594 (65%), Gaps = 20/594 (3%) Strand=Plus/Plus Query 196268 AAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAA 196327 ||||| |||| || || ||||| || ||||| || || |||||||| || ||| | || Sbjct 13947 AAGTCGGAGGTGGACGAGATTGTGCTGGTGGGCGGTTCGACCCGTATCCCCAAGGTGCAG 14006 Query 196328 CAGATGCTTTCTAG--CTTCTTCAATAATAAAGATTTAAACAAAACGA----TCAACCCG 196381 ||| || | | || || |||||| ||||| | || | ||||| Sbjct 14007 CAGCTGAT--CAAGGACTACTTCAACGGCAAAGAGC----CCTCGCGCGGTGTGAACCCC 14060 Query 196382 GATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAAT 196441 || || || ||||| || ||||| || || |||| | ||| || |||| || | Sbjct 14061 GACGAGGCTGTTGCCTACGGTGCTGCTGTGCAGGGCGGTATCCTG---GGTGGCGAGCAG 14117 Query 196442 AATAACGT--CCAAGATCTT-CTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAA 196498 | || | ||||| | | || || | ||||| | || | |||| |||| |||| Sbjct 14118 GACGACCTGACCAAGGACGTGCTTCTGATCGATGTGGTGCCTCTGTCCCAGGGTATTGAG 14177 Query 196499 ACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAG 196558 || | |||||| || ||||| || | ||| | | ||||| || ||||| |||||| Sbjct 14178 ACTGTGGGTGGCGTCATGACCAAGCTCATTAACCGCAACACTGTGATCCCGACCAAGAAG 14237 Query 196559 GAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAA 196618 || ||| || || || || || || || | ||| | ||| || || | || Sbjct 14238 TCGCAGACCTTCTCGACCTACCAGGACAACCAGCCCGCTGTGCTTATCCAGGTGTTCGAG 14297 Query 196619 GGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGAT 196677 || || || | || || | ||||| |||| ||| || || | ||||| | || || | Sbjct 14298 GGCGAGCG-TGCCATGACCAAGGACAACCGTCTTCTGGGCAAGTTCGAGCTCACTGGCCT 14356 Query 196678 TCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGG 196737 || | || || | ||||| || |||||| | || ||||| || ||||| || || Sbjct 14357 GCCGCCCGCCCCGCGTGGTGTGCCCCAGATTGAGGTGACGTTCGAGATTGACGCCAACGG 14416 Query 196738 AATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTAC 196797 || || | || | ||||||||||||| | ||||| | || | ||| ||| || Sbjct 14417 TATCCTGCAGGTGTCCGCTGAGGACAAGGGCACGGGCAAGGCCGAGACGATCACGATCAC 14476 Query 196798 CAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || ||||| || || || ||||||| || || || ||||| || || || Sbjct 14477 TGCCGAGAAGGGCCGTCTGTCGCAGGAGGAGATCGACCGCATGGTCCAGGAGGC 14530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657813397474480