Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001955675.1_202017-01-18] 5,959 sequences; 40,766,767 total letters Query= NC_021533.1 Length=45942 Score E Sequences producing significant alignments: (Bits) Value seq4612 80.6 8e-11 >seq4612 Length=1324 Score = 80.6 bits (88), Expect = 8e-11 Identities = 60/68 (88%), Gaps = 2/68 (3%) Strand=Plus/Minus Query 3884 GGCGCGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAGCCGCTGGCTGCAGGTTCGAGTC 3943 |||| ||||||||||||| ||||| |||||||||||| |||| || ||||||||||| || Sbjct 1306 GGCG-GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTC 1248 Query 3944 CTG-CCGC 3950 ||| |||| Sbjct 1247 CTGTCCGC 1240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146882405406432