Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001955675.1_202017-01-18] 5,959 sequences; 40,766,767 total letters Query= NC_022066.1 Length=108297 Score E Sequences producing significant alignments: (Bits) Value seq1747 96.9 2e-15 >seq1747 Length=4394 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 95577 CATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGG 95636 ||||||||||| |||||| ||||||||||| ||||||| || ||||||||||||||||| Sbjct 472 CATCGAGTTGACGAAGCTCGACTTGCCCGACCCGGTGGAACCGGCCACCAGCAGGTGGGG 531 Query 95637 CATTTTGGCCAGGTTC 95652 ||| || || |||||| Sbjct 532 CATCTTCGCGAGGTTC 547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346400440732542