Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001955675.1_202017-01-18] 5,959 sequences; 40,766,767 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq174 343 2e-89 seq36 131 2e-25 seq4140 127 2e-24 seq961 127 2e-24 seq118 125 8e-24 seq678 120 3e-22 seq257 116 4e-21 seq28 111 2e-19 >seq174 Length=41746 Score = 343 bits (380), Expect = 2e-89 Identities = 1140/1748 (65%), Gaps = 54/1748 (3%) Strand=Plus/Plus Query 80036 GCGTCCGCAGAT--AGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCAT 80093 |||||||| || ||||||||||||||||||| |||||||||||| |||| | |||||| Sbjct 19197 GCGTCCGCGCATGTAGTACATGCCCGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCAT 19256 Query 80094 AGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACA 80153 || | ||||| || || |||| | ||| |||||||| ||||| ||| || Sbjct 19257 GGACGTCAGCTTGCTAATCGTCGGGTCGGCAATGTGAATGTTCAGCGACTGGCTCTGGCA 19316 Query 80154 GATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATAC 80213 ||| | || ||||| || |||| || || | | | ||| || || ||||| || Sbjct 19317 AATGTAGGCGCCACGGTCCGCCGACAGGTCCAACACGGCCTTCTGCTTGATCTCCCACAC 19376 Query 80214 TGTACGATACACCTTACGAAGCTCCTCTGGAATG---TCCAGATTTTGCACACTGCCACC 80270 || ||| || | || || |||||| | || || ||||| |||||| Sbjct 19377 CGTCTTGTACTTCTCCTTGACCTGGTCCGGAATGGATTTCACCTTCTGCACGGAGCCACC 19436 Query 80271 GTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTT 80330 ||| | ||| || || || |||| |||||||| || |||| | ||| || || Sbjct 19437 GTCAGCCAGAATCTGGTTGCGCACCTCAGGCGTCCAGATGCCCAGCTCGATCAGCTCCTT 19496 Query 80331 CACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTT 80390 || |||| |||||| | || ||||| || || || ||| || |||| ||| Sbjct 19497 CATGAGGTACTTGTTCACGATCGTGAACTCACCAGCCAGCACGCGGCGGTTGTACATGTT 19556 Query 80391 TGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGG 80450 | ||||| ||||| | | ||||||||| || | ||||||||||| ||| || || Sbjct 19557 CGACGTGTACGGCTCGATGGACTCGTTGTTGCCCAAAATCTGAGCCGTCGACGCAGTGGG 19616 Query 80451 CATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCT---TCTTGATATCCT--CGCGC 80505 |||||| | || | || || || || | |||||||| || | | |||| |||| Sbjct 19617 CATCGGAGCCACGAGGAGCGAGTTGCGGATGCCGTGCTTGATCACGTTCTCCTTGAGCGC 19676 Query 80506 A----AATCTGACCAAAAATCAACCCCA--ACGCTGTGA--CCCCACATGTCGTGCTGCA 80557 | |||| ||| | | ||| | ||| |||| |||||||||||| ||| | Sbjct 19677 AGCCCAATC---CCACA----AGCCCGAAGACGGGGTGACGCCCCACATGTCGAACTGGA 19729 Query 80558 AGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCA 80617 |||| |||| || || || ||| ||||||||||||||||||| | |||||| | Sbjct 19730 AGATACCCTTGCTGGCAGGCGATCCCTGGAACGTCTCGTACGGGCCCAGCTCCTTGGCGA 19789 Query 80618 GCTCACACGA---CTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCA 80674 ||| ||| ||||||| | |||| || || ||| |||| | | |||| | Sbjct 19790 TCTCCATCGAGGTCTCCATA---GAAGCGTAGTAGATCGTCTCGAAGATGTTCATGTTGA 19846 Query 80675 CACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGC 80734 | || || || ||| ||||||| || ||| | || || | || || || | Sbjct 19847 GTTCACGGGCTTGCGGGCTCTCGAACGCATAGTTCATGAGGATAAATGCATCCGCGAGAC 19906 Query 80735 CCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA-TCGCTCGGCCTCCGGAATT 80793 |||| ||||| || | | ||||||||||||| |||| || | || | |||||| | Sbjct 19907 CCTGGACGCCAATACCAACCGGGCGGTGGCGCATGTTGGACTTGCGC-GCCTCCTCCACG 19965 Query 80794 GGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCA 80853 ||||| |||| || ||||| ||||| ||| || || || ||| || || || Sbjct 19966 GGGTAGTAGTTGACGTCAATGACCTTGTTCAAGTTCCGGGTCACCACCTTGGTCACCTCG 20025 Query 80854 TGAAGTTTCTGAAAGTCGAATTGGTTCC--CCTTCACAAATGCCGGAAGGCTCAGGGACG 80911 | || ||||| ||| ||| ||| ||| |||||| || ||| || |||| Sbjct 20026 TACAGCTTCTGGTAGTTGAA--CACTCCATCCTCCACAAACTTGGGGAGGGCCACAGACG 20083 Query 80912 CCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAAT 80971 |||| |||||||| |||||||| || | || |||| | || || |||||| | Sbjct 20084 CCAGGTTGCACACCGCCACCTCATCGGGCGACGTGTACTCCATAATCTCGCAGCACAAGT 20143 Query 80972 TAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGT 81031 | || || || || ||||| | |||||| |||||| |||| |||||||||| Sbjct 20144 TGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGT 20203 Query 81032 AGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGC 81091 | |||| |||| || ||||| | ||| | | ||||||||| ||| | || Sbjct 20204 ACAGCATGAACGGCACGCCCGTCTCAATCTGCGCGTCCAGGATGGCGAACCACAGCTGCT 20263 Query 81092 GCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCG 81150 | || |||| | |||||| || || | | ||||| |||| || || ||| Sbjct 20264 GGGCATTGATCGTCTTGCGCGCGCGCCCCTCCTTCTCGTACTTCTCGTACAGAGTC-TCG 20322 Query 81151 AACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAG 81210 |||| | | || || ||| | ||| ||| || ||||| | ||| ||| Sbjct 20323 AACTCGTCGCCCCAGCACTCGTAGAGTCCGGGGGCCTCATTGGGGCAGAAAAGGCTCCAC 20382 Query 81211 TCGGTGTCGTTC---TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAAC 81267 | || ||||| || ||| ||||||||| || |||| ||| || ||| ||| Sbjct 20383 T---TGCCGTTCGCTTCCACACGCTTCATGAACAGATCGGGGACCCACAGAGCGTAGAAG 20439 Query 81268 AGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATG 81327 |||||||| ||| | ||| | || ||||| ||||| ||| || || || | Sbjct 20440 AGGTCGCGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTGCGCAGCTCCAGGAACTCGAAC 20499 Query 81328 ATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCC 81384 | ||| || ||||| |||||||| || | ||||| ||| || ||||| | || ||| Sbjct 20500 ACGTCAGCGTGCCACGGCTCCAGGTAGATGGCGAACGAGCCTTTGCGCTTGCCTCCTCCC 20559 Query 81385 TGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGAC 81444 |||| || || ||||| || | || || || | || ||| |||||||| || | || Sbjct 20560 TGGTCCACATAGCGGGCCGTGTCATTGAAGACCCTCAGCATGGGGATGATCCCGT-TGGA 20618 Query 81445 TGA-CCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACC 81503 ||| |||||||| || ||| | ||||||| | ||| || || || Sbjct 20619 TGATCCGTTCGTGCCGCGGATGTAGCTGTTCGTGGCGCGGATGTTGTGCATACTAATGCC 20678 Query 81504 GATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTC 81563 || || || | |||||| || || || ||| | || | || || ||||| ||||| Sbjct 20679 AATACCTCCGGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAAATGCCCTC 20738 Query 81564 GATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCC 81623 || || | | |||| | |||| |||||| |||| ||| || | | ||| Sbjct 20739 AATCGAGTCGTCCTGCATGGCCAGCAGGAAACACGACGACAGCTGCGGACGCGGCGTGCC 20798 Query 81624 GGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAAC-GGTTTGACATCAGGTCATAGG 81682 ||| || || || || || |||||||| | ||| ||| | |||||| || ||||| | Sbjct 20799 GGCGTTAAAGAGCGTGGGCGTCGCGTGCGT-AAAGAACATCTGTGACATGAGCTCATACG 20857 Query 81683 T-TTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATG 81741 | | | || ||| ||| || || | ||||||||| | || || ||||| | ||| Sbjct 20858 TGTGCAGTGCCGCCTGG-ATGTCTTGCTTGTGAATACCCAGCGCCACGCGCATGATCATC 20916 Query 81742 TACTGGGG 81749 | |||||| Sbjct 20917 TGCTGGGG 20924 >seq36 Length=76722 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||| | || |||||||| || || || || || ||| | Sbjct 56629 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 56688 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || ||| | || ||||| ||||| || ||||||||||| || || || |||||| Sbjct 56689 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 56748 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || || || ||||| || ||||| | ||| || || ||| ||||| || Sbjct 56749 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGC-GACTACAA 56807 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| || || || || | || ||||||||||||| ||| Sbjct 56808 CATCCAGAAGGAGTCTACACTGCACTTGGTGCTGCGTCTTCGCGGCGGA 56856 Score = 125 bits (138), Expect = 8e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||| | || |||||||| || || || || || ||| | Sbjct 56401 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCTTCG 56460 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || ||| | || ||||| ||||| || ||||||||||| || || || |||||| Sbjct 56461 GACTCCATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCAG 56520 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || || || ||||| || ||||| | ||| || || ||| ||||| || Sbjct 56521 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGC-GACTACAA 56579 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || | || ||||||| || ||||| Sbjct 56580 CATCCAGAAGGAGTCTACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 56627 >seq4140 Length=1496 Score = 127 bits (140), Expect = 2e-24 Identities = 351/533 (66%), Gaps = 5/533 (1%) Strand=Plus/Plus Query 64319 TGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCG 64378 ||||| || | |||||||| || || |||||||||| ||||||| | || || | Sbjct 418 TGTGGCAGATGTACAAGAAGGCGGAGGCGTCGTTCTGGACGGCCGAGGAGCTGGACCTGG 477 Query 64379 CCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG-GAACAGCACTTCATCAAGTTG 64437 | || || | ||||||| ||||| | | ||| || | |||||||||||| Sbjct 478 TGCACGACCTGAAGGACTGGGGGAACCTGA-CGGACAACGAGCGCCACTTCATCAAGCAC 536 Query 64438 GTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAATTTT 64497 || |||||||||||||| | || ||||| || ||| ||||| ||| | || || Sbjct 537 GTGCTAGCATTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCGATGAACTTC 596 Query 64498 ACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAACGAA 64557 | || || || || | || ||||| || | ||||| | | ||| | ||| Sbjct 597 AGCAATGAGGTGCAAGTGCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCGCCATCGAG 656 Query 64558 AGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAG 64617 | || || ||| ||| ||||| |||| |||| || | ||| | || ||| Sbjct 657 AACATCCACTCGGAGGTGTACTCGCTGCTGATCGACACGTACATCAAGGACGCCGTGGAG 716 Query 64618 AAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGG 64677 |||||| || | | || || ||||| | || || || ||||| ||| Sbjct 717 AAGGATCACTTGCTGCGTGCCATCGAGACGATCCCGTGCGTGGAGAAGAAGGCCCGCTGG 776 Query 64678 GCCATCCGGTGGA-TGAA--TCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCC 64734 || || |||| ||| ||||| ||||| | ||||||| || || ||| Sbjct 777 GCGCTCAAGTGGTGTGACCCTCGTGTTTCGTCCTACCCGGAGCGTCTGCTGGCGTTCGCC 836 Query 64735 TGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGG 64794 ||||| || |||||||| || || || ||||| || || |||||||| || ||||| Sbjct 837 GCCGTGGAGGGCATTTTCTTCTCGGGTTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGC 896 Query 64795 GGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 ||||| ||||| |||||| || ||||||||||| ||| ||||||||||| Sbjct 897 GGCCTCATGCCTGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGGGACGAGGG 949 >seq961 Length=10404 Score = 127 bits (140), Expect = 2e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| |||||||| ||||| || || |||||||| || || || || || ||| | Sbjct 6822 ATCATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTAGAGCCG 6763 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || ||||||| ||| | ||| ||||| ||||||||||| || ||||| || ||| Sbjct 6762 TCCGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGAC 6703 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| || || || || || ||||| |||||||| | || || || | ||||| Sbjct 6702 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTAC 6643 Query 27583 AATGTCCAAAAGG 27595 || |||| |||| Sbjct 6642 AACATCCAGAAGG 6630 >seq118 Length=50062 Score = 125 bits (138), Expect = 8e-24 Identities = 210/302 (70%), Gaps = 4/302 (1%) Strand=Plus/Minus Query 31950 TGAAGATATCAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAA 32009 || ||||| | |||| || | || |||| |||||||| ||| || ||||| || Sbjct 34100 TGCAGATAACCAGCGATCGCTGCCCTCGGTGGTTGACGGCCTGAAGATCTCGCAGCGTAA 34041 Query 32010 GGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTC 32069 |||| | | ||| ||||| || || || |||| || | |||||||| |||||| | Sbjct 34040 GGTGCTTTTCGCATGCCTGAAACGCAAGCTAACGAGCGAGGTTAAGGTGGCACAGCTGGC 33981 Query 32070 GGGCTACGTGGCAG--AGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACC 32127 ||||||| |||| |||| ||||| || ||||| ||||| || || || || || Sbjct 33980 GGGCTACT--GCAGTGAGCATACGGCTTACCACCATGGCGAAGCTTCACTGCACTCGACG 33923 Query 32128 ATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCT 32187 ||||||||| | || ||| | || || || | || ||||| | | | || || Sbjct 33922 ATTGTCAACATGGCGCAGGATTTCGTGGGATCCAACAACCTTCCGCTGTTGTATCCTTCA 33863 Query 32188 GGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTC 32247 || || || || ||||| || || ||||||||||| || ||| | |||||||||||| Sbjct 33862 GGTCAATTCGGTACCCGTCTGCAAGGAGGCAAGGATGCCGCTAGCCCTCGTTACATCTTC 33803 Query 32248 AC 32249 || Sbjct 33802 AC 33801 >seq678 Length=15758 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || |||||||| || || | || || ||| | Sbjct 15306 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCG 15247 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| ||||||||||||||||| || || || || |||||| Sbjct 15246 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 15187 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || ||||| ||||| ||||| || || || | || || || ||| ||||| || Sbjct 15186 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGC-GACTACAA 15128 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || || || || || ||||||| || || || Sbjct 15127 CATCCAGAAGGAATCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 15080 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || |||||||| || || | || || ||| | Sbjct 15534 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCA 15475 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| ||||||||||||||||| || || || || |||||| Sbjct 15474 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 15415 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || ||||| ||||| ||||| || || || | || || || ||| ||||| || Sbjct 15414 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGC-GACTACAA 15356 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || ||||||| || || || Sbjct 15355 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 15308 Score = 105 bits (116), Expect = 8e-18 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 27412 ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGC 27471 ||||| || ||||| | || |||||||| || || | || || ||| | || Sbjct 15756 ATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCAGACTCG 15697 Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531 || | || ||||| ||||||||||||||||| || || || || ||||||||||| Sbjct 15696 ATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGC 15637 Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCA 27590 || ||||| ||||| ||||| || || || | || || || ||| ||||| || |||| Sbjct 15636 CTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGC-GACTACAACATCCA 15578 Query 27591 AAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || || || || || || ||||||| || || || Sbjct 15577 GAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 15536 >seq257 Length=32862 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || |||||||| || || | || || ||| | Sbjct 343 ATGCAGATCTTTGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCA 284 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| ||||||||||||||||| || || || || |||||| Sbjct 283 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 224 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || ||||| ||||| ||||| || || || | || || || ||| ||||| || Sbjct 223 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGC-GACTACAA 165 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || ||||||| || || || Sbjct 164 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 117 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | || |||||||| || || | || || ||| | Sbjct 571 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACCTTGGACGTGGAGCCGTCA 512 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| ||||||||||||||||| || || || || |||||| Sbjct 511 GACTCGATCGACAACGTGAAGCAGAAAATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 452 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || ||||| ||||| ||||| || || || | || || || ||| ||||| || Sbjct 451 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGC-GACTACAA 393 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || || || || || ||||||| || || || Sbjct 392 CATCCAGAAGGAATCTACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 345 >seq28 Length=84278 Score = 111 bits (122), Expect = 2e-19 Identities = 258/386 (67%), Gaps = 15/386 (4%) Strand=Plus/Plus Query 24723 TTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAG 24782 || || || ||| |||||| || | || ||||| ||||| | || |||||| || Sbjct 42245 TTCTACCAAGCGTCTACGAGCGAATTATTCGGCAAAGTGCAAGCCACCCCACAGGATGAA 42304 Query 24783 ACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATA 24842 ||| || || | ||||| ||||| || || | ||| ||| |||| |||| Sbjct 42305 GACACGCCGTTCCACCCGCGCTCACCGTACGGTGTAGCGAAGCAGTTTGCGTTTTGGAGT 42364 Query 24843 ACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAACGGAATTCTGTTCAACCAT 24902 |||| |||| || ||| | ||||| || || ||||| |||||||||||||| Sbjct 42365 GTGGTGAACCACCGAGAAGCCTACGGGATGTACGCCGTGAACGGGATTCTGTTCAACCAC 42424 Query 24903 GAGTCGGAGCGTCGGGGACCTGAATTTGTTACACGAAAGATTACTCTTG--GTATTGACC 24960 ||| ||| || ||||| || || || || ||||| || | || || || | Sbjct 42425 GAGAGTCCGCGACGCGGACCAACCTTCGTGACCCGCAAGATCACGCGTGCGGTGGTGCGC 42484 Query 24961 ATT-------GGATCAAGACAAGGGCACCTATTGAGCTGGGAAACCTAGATGCCAAACGT 25013 ||| |||| ||| | || || ||| |||| ||||| |||||||| ||| Sbjct 42485 ATTCGTGCGGGGATTGAGAG--GTGCCTCT-TTG---TGGGCAACCTGGATGCCAAGCGT 42538 Query 25014 GATTGGGGGCATGCAGCCGACTACGTCGACGCCATGTGGCGCATGCTCCAACAGAATAAG 25073 || ||||| || || ||||| || || ||||||||||||||| ||||| | | | Sbjct 42539 GACTGGGGCCACGCCCGTGACTATGTGGAATGCATGTGGCGCATGCTTCAACACGACACG 42598 Query 25074 CCAGAGGATTTTGTGATCGGCACCGG 25099 ||| |||||||||| | | |||||| Sbjct 42599 CCACAGGATTTTGTTGTTGCCACCGG 42624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570267919004080