Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001955675.1_202017-01-18] 5,959 sequences; 40,766,767 total letters Query= NC_028653.1 Length=67617 Score E Sequences producing significant alignments: (Bits) Value seq1626 87.8 8e-13 >seq1626 Length=4816 Score = 87.8 bits (96), Expect = 8e-13 Identities = 111/152 (73%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 40927 CTCCATCGGGTCGACCTCGGTGATGCGCAGCAGGAAGCAGACCAGCGACCCGGCAGCCGA 40986 ||| | |||||||| ||||||||||||| | || ||||| |||||| || | || Sbjct 2333 CTCGAGCGGGTCGAGGTCGGTGATGCGCATGGCGTAGGCGACCATCGACCCCGCGCCGGA 2274 Query 40987 CCCGCGGCCGGGACCGACCCCCATCTTCGCGACGTCCTTGGCCCACCGGACCAGGTCCGC 41046 |||||||||||||| || | | | || |||||||||||| || | ||| || Sbjct 2273 ACCGCGGCCGGGACCCACGCGGA---TGCCGTTGTCCTTGGCCCAGTTGATGAAGTCGGC 2217 Query 41047 GGTGACCAGGAAGTAGTCGCAGAACCCCTTCT 41078 | ||||||||||||| || ||||||| ||| Sbjct 2216 GACGACCAGGAAGTAGCCGGGGAACCCCATCT 2185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 216233894805222