Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2070 145 7e-30 >seq2070 Length=5564 Score = 145 bits (160), Expect = 7e-30 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244 || ||| ||||| |||||||| ||||| ||||| ||||| || ||||| ||||||| | Sbjct 1298 AAGCAACAATGCAGATTTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGG 1239 Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGC 31304 | ||||| ||| |||| | || || |||| || ||||||||| ||| | |||| Sbjct 1238 AGCCGTCGGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGC 1179 Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG 31364 ||||||||||||| || || ||||| ||||| ||| |||| ||| || |||||| Sbjct 1178 CCGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCG 1119 Query 31365 ATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | || ||||| || || || ||||| || || ||||| || Sbjct 1118 ACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCT 1079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445559480809200