Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_009015.1 Length=72415 Score E Sequences producing significant alignments: (Bits) Value seq9208 113 2e-20 >seq9208 Length=7485 Score = 113 bits (124), Expect = 2e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 2982 GATGAAGTGCCGACTCGAAGACCTTTACGTCGAAGAAGGCTTCAACCTTCGCACGCCGTT 3041 ||||||| ||| | |||||| | |||||||| || || ||||| ||| |||| Sbjct 3079 GATGAAGATCCGCCACGAAGATATCCACGTCGAACCCGGATTTAACCTCCGCGTCTCGTT 3020 Query 3042 CGATCAACTCGAAGGTGAAGCCCTTCAAGAAGTTCTCGACGCCGACGAAGCGCTTTATGA 3101 ||||| |||||||| ||||| ||| || | | | | ||||||| || || || Sbjct 3019 CGATCTGCTCGAAGGCGAAGCGCTTGAACAGGCCAAGGCGGACGACGAAAGCCTGTACGA 2960 Query 3102 GTTCATCAAAGCTGGCGGTCAGATTCCGCCGCTCGAAGTTCGCCCGCGCGCGGAAGGTGG 3161 | ||||| | ||||| |||| |||||||| || |||||||||||||| ||||| || Sbjct 2959 GCACATCATGGAAGGCGGCAAGATCCCGCCGCTGGAGGTTCGCCCGCGCGCCGAAGGCGG 2900 Query 3162 CGTGTGGGTCGTCGAGGGCCATCGCCG 3188 || ||| ||||||| || || || || Sbjct 2899 TGTCTGGCTCGTCGACGGACACCGGCG 2873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231498380372360