Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_011589.1 Length=40287 Score E Sequences producing significant alignments: (Bits) Value seq24004 120 8e-23 >seq24004 Length=772 Score = 120 bits (132), Expect = 8e-23 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 28885 AGGATCTGCAGCGCCTGCCTGGACAGCGGCACCAGGTGCGCAGCACGCATCTTCATCTTG 28944 |||||| || |||||| ||| ||||| || ||||||| ||| ||||||||||||| Sbjct 335 AGGATCGCCACGGCCTGCTGGGAAAGCGGGACGAGGTGCGGAGCCTTCATCTTCATCTTG 276 Query 28945 CTGGCAGGGATGGTCCACACGGCCGCGTCGAGGTCGAACTCCTCCCATTCCGCATGCCGC 29004 |||||||| ||||| || |||||||||||||||| |||||||||| || Sbjct 275 GGCCCAGGGATGCGCCACAAGGAGCCGTCGAGGTCGAACTCAGCCCATTCCGCCGTGCGG 216 Query 29005 AGTTCGCCAGGACGCAGGAACACCAGCGGCGCCAGCCGCAGCGC 29048 ||||| || ||||| | |||||||||||| || || || || || Sbjct 215 AGTTCACCGGGACGGACGAACACCAGCGGGGCGAGACGAAGGGC 172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128740003428630