Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq21772 89.7 7e-13 seq10078 84.2 3e-11 >seq21772 Length=843 Score = 89.7 bits (98), Expect = 7e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 194701 TTTGGTGGGCCCGGTCAGGATCGAACTGACGACACCCGGATTTTCAATCCGGTGCTCTAC 194760 |||||||| | |||| | ||||||| ||||||| ||||||||||||||| |||||||| Sbjct 769 TTTGGTGGCCTGGGTCGGAATCGAACCAACGACACGCGGATTTTCAATCCGCTGCTCTAC 710 Query 194761 CATCTGAGCTACAGGTCCA 194779 || ||||||||| || ||| Sbjct 709 CAACTGAGCTACCGGGCCA 691 >seq10078 Length=5346 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 191861 TTGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACC 191920 |||||| | ||||| ||||||||| |||||| |||||||| |||||| ||||||||| Sbjct 147 TTGGTGGGGCGTGAGTGACTCGAACACTCGACCTACGGATTAAGAGTCCGCTGCTCTACC 88 Query 191921 AACTAAGCTAACGGCGCGTTG 191941 |||| |||||||| | || || Sbjct 87 AACTGAGCTAACGCCCCGGTG 67 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720395046328800