Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq5851 93.3 1e-14 >seq5851 Length=15977 Score = 93.3 bits (102), Expect = 1e-14 Identities = 74/85 (87%), Gaps = 3/85 (4%) Strand=Plus/Minus Query 1 TTTGTAATCATCAGGTGGCGGGTTCGAGTCCTGCAGCCGGCACCATATCCAG-CAAGGGG 59 ||||||||||||||||||||||||||||||||||||||||||||| | | || ||| ||| Sbjct 15809 TTTGTAATCATCAGGTGGCGGGTTCGAGTCCTGCAGCCGGCACCA-AACAAGACAAAGGG 15751 Query 60 TTACGCGATGTTTGCGTAGCCCCTT 84 ||||| ||| || |||| ||| || Sbjct 15750 TTACGTGAT-TTCACGTAACCCTTT 15727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129597225245790