Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq3647 84.2 3e-11 >seq3647 Length=24800 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 141678 GGAAGAGTGGTCGAGTGGTTTATGGCACTGGTCTTGAAAACCAGCGAGGGTGCAAGTTCT 141737 ||||| |||| ||||||||||| ||| | ||||||||||||| |||| || | || | | Sbjct 8559 GGAAGCGTGGCCGAGTGGTTTAAGGCTCCGGTCTTGAAAACCGGCGAAGGGGTAACCTTT 8500 Query 141738 CCGTGGGTTCAAATCCCACCTCTTCC 141763 ||||| |||| |||| |||| ||||| Sbjct 8499 CCGTGAGTTCGAATCTCACCGCTTCC 8474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610113461435400