Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_018856.1 Length=153962 Score E Sequences producing significant alignments: (Bits) Value seq1518 84.2 2e-11 >seq1518 Length=40140 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/90 (81%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 6767 GGAGGGTTGGCAGAGTGGATTATTGCAGCGGTCTTGAAAACCGCCGA--GGGTAAAACCT 6824 ||||| || |||||||| ||| || | ||||||||||||||| ||| |||||| | | Sbjct 652 GGAGGCGTGCCAGAGTGGTTTAATGGACCGGTCTTGAAAACCGGCGAAGGGGTAACCCTT 711 Query 6825 CCGTGAGTTCAAATCTCACACCCTCCTCCA 6854 |||||||||| |||||||| ||||| ||| Sbjct 712 CCGTGAGTTCGAATCTCACCGCCTCCGCCA 741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492321764261200