Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq25497 89.7 6e-13 >seq25497 Length=733 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39639 ATCGTTTCCGCATGGAACCCTGTTGATCTGGATGATATGGCTCTGCGTCCGTGTCACTGT 39698 |||||||||||||||||| | || ||| | ||||| ||| ||||| ||| Sbjct 603 ATCGTTTCCGCATGGAACGTGGGCGAACTGCCGAAGATGGCCCTGATGCCGTGCCACACC 544 Query 39699 TTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCAGTT 39758 | ||||||||| ||| ||||| ||||| || ||| ||| ||||| || | Sbjct 543 ATGTTCCAGTTCTACGTGGCGAACGGAAAACTCTCGTGCCAGCTGTACCAGCGCTCGGGC 484 Query 39759 GATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCTGACGCATATTATC 39818 ||| | ||| | || | ||||||||||||||| |||||| || || || ||||| ||| Sbjct 483 GATATTTTCCTCGGCATCCCGTTCAATATCGCCAGCTACGCACTGCTCACCCATATGATC 424 Query 39819 GCTGATATTTGCGGGTATGAAGTGGGCGA 39847 || | | |||| ||||||||||| Sbjct 423 GCCCAGGTCACCGGGCTGGAAGTGGGCGA 395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569824971533800