Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_019514.1 Length=74669 Score E Sequences producing significant alignments: (Bits) Value seq10511 84.2 1e-11 >seq10511 Length=4473 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 17040 ATCTGCAAGACCCTGGTTATGCTGCTGTGCTGCTGCCTCGCAGTGGCCTTGGGCATAAAT 17099 ||||| || || || || || || || | || || ||| || || || ||||| Sbjct 872 ATCTGGCCGATCCGGGCTACGCCGCGCTGATTCTCCCGCGCTCCGGTCTCGGCCATAAGC 813 Query 17100 CTGGCATTGTACTTGGGAACCTGGTGGGTCTGATTGATTCGGACTATCAGGGTGAGCTGA 17159 ||||| || || || || ||||| || ||||| || |||||||||||||| || ||| Sbjct 812 ACGGCATCGTGCTGGGCAATCTGGTCGGCCTGATCGACTCGGACTATCAGGGGCAGTTGA 753 Query 17160 AGGTTTCCCTGTGGAACCGCAGCGCTGAACCATACACTGTCAGCCCTGGTGAGCGTGTTG 17219 ||| || ||||| ||| || ||||| | | | | ||| |||||| | | Sbjct 752 TGGTCTCGACATGGAATCGCGGCAACGAACCGTTCGTGCTGAACCCGTTCGAGCGTCTGG 693 Query 17220 CCCAAATGGTTATCGTGCCAGTAGTGCAGGCACAGTTTGAGCTGGTTGATGAATTC 17275 | ||| |||| |||||||| || ||||| || |||| | | || || |||||| Sbjct 692 CACAACTGGTGATCGTGCCGGTCGTGCAAGCCGAGTTCAACATCGTCGACGAATTC 637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238707915983050