Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_021347.1 Length=142563 Score E Sequences producing significant alignments: (Bits) Value seq10768 114 1e-20 >seq10768 Length=4052 Score = 114 bits (126), Expect = 1e-20 Identities = 138/186 (74%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 105016 GCACCATCACCAGCAAGAACTTCGCCGGGTACTTCAACGTCGTCGCCGACTACACCAAGT 105075 ||||||||| || | | |||| | || |||||| |||| ||||||| || | ||| Sbjct 222 GCACCATCATCAAGATGGGCTTCCCGGGCTACTTCCTGATCGTGGCCGACTTCATCCAGT 163 Query 105076 GGGCTAAGGACCGCA---TGCTCGTCGGTCCCGGCCGTGGTTCGGCCGGTGGCTCGCTCG 105132 |||| ||| || | ||| || || || ||||||||||||| | || ||||||| Sbjct 162 GGGCGAAGAACAACGGTGTGCCGGTAGGACCTGGCCGTGGTTCGGGGGCCGGTTCGCTCG 103 Query 105133 TC-TCGTACCTGATGGACATCACCGAGCTCGACCCGATCAAGTACGACCTGATGTTCGAG 105191 || |||| | ||| ||| ||||| ||||||||| |||||||| ||||| |||||||| Sbjct 102 TCGCCGTATGCGCTGGGCATTACCGATCTCGACCCGCTCAAGTACAACCTGCTGTTCGAG 43 Query 105192 CGGTTC 105197 || ||| Sbjct 42 CGCTTC 37 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455861896335800