Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq4411 84.2 1e-11 >seq4411 Length=21687 Score = 84.2 bits (92), Expect = 1e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 37926 TGCCACCTTGTCATACATTGTTCCAGTTCTTTGTAGAGAATGGAAAACTAAGCTGTCAGT 37985 |||| || || ||| | || |||||||||| || | | || || | ||| ||| Sbjct 3528 TGCCCCCGTGCCATGCGTTCTTCCAGTTCTACGTTGCCGACGGCAAGTTGTCCTGCCAGC 3469 Query 37986 TATATCAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTATGCGT 38045 | |||||||||||||| || ||||| | || || || || || || || ||||| || | Sbjct 3468 TTTATCAACGTAGTGCGGACATCTTCCTCGGGGTGCCGTTCAACATCGCCAGCTACGCAT 3409 Query 38046 TGCTTACACATATCGTAGCTGCAG-AATGTGGATTAGAAGTTGGTGAATTTGTCTGGACT 38104 || | || ||||| || || |||| || || | || || || || || ||||||| Sbjct 3408 TGTTGACGCATATGGTGGC-GCAGCAAACCGGCCTGGATGTGGGCGACTTCATCTGGACC 3350 Query 38105 GGTGGTGTAGTTCACCTGTACAGTAATCACCTTGAGCA 38142 ||||| | || ||||||| |||||||| || || Sbjct 3349 GGTGGCGACTGCCATCTGTACAACAATCACCTCGAACA 3312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248696993051455