Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_024216.1 Length=160541 Score E Sequences producing significant alignments: (Bits) Value seq1518 87.8 2e-12 >seq1518 Length=40140 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/95 (81%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 32938 GCCACGGAGGGTTGGCAGAGTGGATTATTGCAGCGGTCTTGAAAACCGCCGA--GGGTAA 32995 ||| |||||| || |||||||| ||| || | ||||||||||||||| ||| |||||| Sbjct 647 GCCCCGGAGGCGTGCCAGAGTGGTTTAATGGACCGGTCTTGAAAACCGGCGAAGGGGTAA 706 Query 32996 AACCTCCGTGAGTTCAAATCTCACACCCTCCTCCA 33030 | ||||||||||| |||||||| ||||| ||| Sbjct 707 CCCTTCCGTGAGTTCGAATCTCACCGCCTCCGCCA 741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513364791814600