Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq25497 89.7 6e-13 >seq25497 Length=733 Score = 89.7 bits (98), Expect = 6e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 40096 ATCGTTTCCGCATGGAACCCTGTTGATCTGGATAAAATGGCATTGCGTCCGTGTCACTGT 40155 |||||||||||||||||| | || ||| || ||||| || ||||| ||| Sbjct 603 ATCGTTTCCGCATGGAACGTGGGCGAACTGCCGAAGATGGCCCTGATGCCGTGCCACACC 544 Query 40156 TTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCGGTT 40215 | ||||||||| ||| ||||| ||||| || ||| ||| ||||| |||| Sbjct 543 ATGTTCCAGTTCTACGTGGCGAACGGAAAACTCTCGTGCCAGCTGTACCAGCGCTCGGGC 484 Query 40216 GATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCTGACGCATATTATC 40275 ||| | ||| | || | ||||||||||||||| |||||| || || || ||||| ||| Sbjct 483 GATATTTTCCTCGGCATCCCGTTCAATATCGCCAGCTACGCACTGCTCACCCATATGATC 424 Query 40276 GC 40277 || Sbjct 423 GC 422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569754604212600