Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2070 134 1e-26 >seq2070 Length=5564 Score = 134 bits (148), Expect = 1e-26 Identities = 175/238 (74%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 35502 CTTTA-TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTG 35560 ||||| ||||||||||| | || || ||||| || | ||| |||||| || |||||| Sbjct 1055 CTTTAGTTTCCACCACGCAGCCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTG 1114 Query 35561 TAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGG 35620 || ||| || || || |||| ||||||||||| || || || || | ||||||||| Sbjct 1115 TAGTCGCTCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG 1174 Query 35621 TCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCT 35679 || | || | || |||||||||| ||||| ||||||| |||| | | || ||| Sbjct 1175 TCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCA-CGTTGTCGATCGAGTCCGA 1233 Query 35680 CGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || ||||| || | |||||| || || ||||||| || || || || ||||||||| Sbjct 1234 CGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAAATCTGCATT 1291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450584347245800