Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_026610.2 Length=56637 Score E Sequences producing significant alignments: (Bits) Value seq7430 140 1e-28 >seq7430 Length=11454 Score = 140 bits (154), Expect = 1e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20513 CAAGATCCGGCTGCGCTGCTCAAAGTGTTCAAAGACGGGGCTGAGAAGTCTGACGAGATG 20572 || ||||| || | ||||||| || ||| |||||||||||||| | | |||| || Sbjct 8540 CAGGATCCCGCCGAAGTGCTCAAGGTCTTCGAAGACGGGGCTGAGCAATACAACGAACTG 8599 Query 20573 GTGGTGGTCAAGGATATTCCATTCTTCTCCCATTGCGAACACCATATCGCACCGATCATT 20632 | ||||| | ||||| | | | ||| ||||| |||||| |||||||| | | Sbjct 8600 ATCGTGGTGCGCGGCATTCCGGTGTACAGCCACTGCGAGCACCATCTCGCACCGTTTTTC 8659 Query 20633 GGTCTGGCCACAGTAGCCTACATCCCGAACGGGAAGATCGTCGGCCTGTCCAAGATCACG 20692 || ||| || | | ||| | || ||||| ||||||||||||||||| ||| ||||| Sbjct 8660 GGCAAGGCGACCATCGGCTATCTGCCCAACGGCAAGATCGTCGGCCTGTCGAAGCTCACG 8719 Query 20693 CGCTTGGTCGATGCCTTCGCCCGCCGCCTACAAGTGCAGGAGCGTTTGAC 20742 || |||||||| ||| || || ||||| ||||||||||||||| |||| Sbjct 8720 CGTCTGGTCGATTGCTTTGCGCGTCGCCTGCAAGTGCAGGAGCGTCTGAC 8769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181036931453130