Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq1518 89.7 1e-12 >seq1518 Length=40140 Score = 89.7 bits (98), Expect = 1e-12 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 210918 TTTTGGCGGTGAAGGTGAGATTTGAACTCACGGAGGACTTTCGCCCTCGACGGTTTTCAA 210977 ||||||||| | ||||||||| ||||||||||| | || | || ||| |||||||||| Sbjct 744 TTTTGGCGGAGGCGGTGAGATTCGAACTCACGGAAGGGTTACCCCTTCGCCGGTTTTCAA 685 Query 210978 GACCGTTGCATTAAACCGCTCTGCCAC 211004 ||||| | ||||||||| ||||| ||| Sbjct 684 GACCGGTCCATTAAACCACTCTGGCAC 658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113300448197480