Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2604 84.2 7e-11 >seq2604 Length=2437 Score = 84.2 bits (92), Expect = 7e-11 Identities = 100/135 (74%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 443763 CTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACT 443822 ||||||||||||| | || ||||| || || |||| || |||| ||| ||||| || Sbjct 1999 CTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGCCTGAGCTTCTCGAACGAGCT 1940 Query 443823 GATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACAT 443882 |||||| || |||||||| |||| |||||||| || || | ||| |||| | | Sbjct 1939 GATCAGCCGTGACGAGGGCATGCACACGGACTTCGCGTGCCTCATGTACTCCAAGC---T 1883 Query 443883 CGTGCACAAGCTGCC 443897 ||| |||||||||| Sbjct 1882 GGTGAACAAGCTGCC 1868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587580282140075