Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_029099.1 Length=49797 Score E Sequences producing significant alignments: (Bits) Value seq7137 86.0 2e-12 >seq7137 Length=12292 Score = 86.0 bits (94), Expect = 2e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 26331 CGTGGGACGGTGTTTTTAAGTGGGCGTGGAGCAATAACCCGGCATGGGTGCTTTATGACC 26390 ||||||||||| ||| ||| ||| |||| | || |||||||||||| |||||||| Sbjct 8571 CGTGGGACGGTACTTTCAAGACGGCATGGACTGACAATCCGGCATGGGTGTTTTATGACT 8630 Query 26391 TGATCATGAATCAGCGCTATGGTTTAGACCAGCGCGAACTTGGCATCCCGGTTGACAAGT 26450 || | || ||| |||||||| | | ||| || | |||| | ||| ||||||| Sbjct 8631 TGGTGTTGCATCCTCGCTATGGACTCGGCCATCGGGTGAATGGCGCACAGGTCGACAAGT 8690 Query 26451 GGTCGCTGTACGAGGTGGCGCAATACTGTGATGAGCTTGT 26490 |||| |||||| || | || || || || || || || || Sbjct 8691 GGTCCCTGTACCAGATCGCACAGTATTGCGACGAACTGGT 8730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159158583582330