Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F000687305.1_202014-05-08] 37,135 sequences; 47,671,809 total letters Query= NC_031053.1 Length=50934 Score E Sequences producing significant alignments: (Bits) Value seq7137 80.6 9e-11 >seq7137 Length=12292 Score = 80.6 bits (88), Expect = 9e-11 Identities = 116/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 37467 TAGAGCGACCACTTGTCGACCGGGATCCCTAACTCGCGCTGGTCTAACCCATAACGCTGA 37526 || || ||||||||||||||| | || | | || ||| | | ||||| || || Sbjct 8700 TACAGGGACCACTTGTCGACCTGTGCGCCATTCACCCGATGGCCGAGTCCATAGCGAGGA 8641 Query 37527 TTCATGATCAGGTCGTAAAGAACCCAAGCCGGGTTGTTGCTCCACGCCCATTTGAAAGTT 37586 | || | || ||| |||| ||||| ||||| |||| |||| ||| |||||||| Sbjct 8640 TGCAACACCAAGTCATAAAACACCCATGCCGGATTGTCAGTCCATGCCGTCTTGAAAGTA 8581 Query 37587 CCGTCCCACGTTCCGGCATACGTCCTGTTAACAGGGTCATAGTT 37630 |||||||||| |||| |||||| | | | ||||||||||| Sbjct 8580 CCGTCCCACGATCCGACATACGCACGCGTGGCGGGGTCATAGTT 8537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162795379127520