Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq1741 95.1 1e-14 >seq1741 Length=11691 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 83255 CGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGC 83314 || |||||| |||||||| || || | || |||||||||||| |||||| |||| Sbjct 9137 CGCAGGAAGTTGAAGAGCGCGTGCGCGTTGGCGCCGTTGACCTCGACCTTCTCCGTGAGC 9196 Query 83315 ATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCG 83374 ||| |||||||||||| || || || |||| |||| ||| | |||||||| Sbjct 9197 TGGAAGGCCGGCTCGAAGCCCTTGCCGGGGCGGATGTGCCGCAGACTCTGGTAGATCTCG 9256 Query 83375 GCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGG 83416 | | | | ||| |||||||| ||||||||||| |||||| Sbjct 9257 TCGCTGTTGAGGTTCTCCTGGTGGCCGAACTGGTTGCACGGG 9298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608725007637360