Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq584 190 4e-43 seq773 179 7e-40 seq949 159 6e-34 seq1050 158 2e-33 seq7744 140 6e-28 seq188 113 8e-20 seq290 102 2e-16 seq58 86.0 1e-11 >seq584 Length=26749 Score = 190 bits (210), Expect = 4e-43 Identities = 507/757 (67%), Gaps = 26/757 (3%) Strand=Plus/Plus Query 10071 CGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATCATGCGG 10130 ||||| ||||||||||||||||| |||| ||| || ||||||||||||| |||| || Sbjct 11117 CGGTCGGCCACGAACTCGATGTATTGGCACATGAGCCCCGAGTTCATGCCGATCA-GCTC 11175 Query 10131 CAG-GGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGATGCT 10189 || |||| | ||| | | ||| || | ||| | | ||||| || ||||| || Sbjct 11176 CACAGGGAGCGAGTCACGCACGAACTCGTGCTCGATCGTCACCGCGTCGCGCACGAT-CT 11234 Query 10190 CTTTACCACG--TCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCCAAAC 10247 | | | || || || |||||||||| | ||||| || |||| ||| | || Sbjct 11235 CGTGCACGCGGCTCTCCGG-CAGCTTGTTCACCAGCTTGGAGTACATGAGGCACGCGAAG 11293 Query 10248 TGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATG 10307 | | ||| | ||||||||| |||||||| | |||||| || || | ||| || |||||| Sbjct 11294 TCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCATG 11353 Query 10308 AGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA--CCCT 10365 || || || || |||||||| || | ||||||||| || ||||| ||||| |||| Sbjct 11354 AGGCCGCGCTTCTTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAA--GAAGATGCCCT 11411 Query 10366 CCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAG--CGGTCGCGCGAAA-AGTATT 10422 ||||| | | || | | |||||| | | | || | ||||| | | | | Sbjct 11412 CCACGGTTGCGAACGCCAGCACGCGCTCCGGGTACGACGACACTCGCGGGTCGCACCACT 11471 Query 10423 TCGAG-GCCCA---CGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAAG 10478 | ||| ||||| |||| |||||| ||| || ||||| ||||| || || || Sbjct 11472 T-GAGCGCCCAGTGCGCTTTCTTCTT---CACACACGGAATCGTATCGATGGCA-CGCAG 11526 Query 10479 -AGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCTC 10537 || | || ||| ||| | |||| || | |||| |||||| || || ||| Sbjct 11527 CAGGTGGTCCTTCTCCGTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACACCTC 11586 Query 10538 GCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCGT 10597 ||||| | |||| || |||| || ||||||| || ||| || || Sbjct 11587 CGAGTGGATGTTCTCGATGGCGATCTGGAAACCGTAGAAGCAGCGGGCCTCCGGCACCTG 11646 Query 10598 GACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAA 10657 ||||| | | ||||| || ||||||||| |||| ||||| |||||| | || || Sbjct 11647 CACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGAA 11706 Query 10658 GAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTC 10717 |||| | || | ||||||||||||| ||||| | || |||| || | |||||| Sbjct 11707 GAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGGTTCGC---CCAGTC 11763 Query 10718 TACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTT 10777 || || || || | | |||||| | |||||||| | ||| | |||||||| Sbjct 11764 CTTCAGGTCGTGCGCCAGGTCCAGCTCCTCGGCCGTCCAGAACGAGGCCTCCGCCTTCTT 11823 Query 10778 GTACATCTGGAAAATGTCGGGGTACCGGATGGGGAAC 10814 ||||||||| | | |||| | | | |||| |||||| Sbjct 11824 GTACATCTGCCACACGTCGTGCTCCTGGATCGGGAAC 11860 >seq773 Length=22196 Score = 179 bits (198), Expect = 7e-40 Identities = 400/590 (68%), Gaps = 14/590 (2%) Strand=Plus/Plus Query 268211 CCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGCTTCG 268270 ||||| |||| ||||| || || || | | || |||||| |||||| || Sbjct 17037 CCAGTAGCAACAACAAAATCATCCGGAGTATCATGTTGAAGCATTCGCCACATGCACTCC 17096 Query 268271 ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCAT 268330 || ||||| || || |||||||| || || || ||||| | |||||| | || ||||| Sbjct 17097 ACGTAGTCGCGAGCGTGGCCCCAGTCTCGTTTCGCGTCGAGGTTCCCCACAAAGAGGCAC 17156 Query 268331 TTCTGCTTGCCGAGCTTCACG----CGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAA 268386 |||| | || ||| ||| || ||| | | || ||||| || || || ||||| Sbjct 17157 TTCTCAATACC-AGC---ACGAATACGCACAACAGCTCGGGTGATCTTGCGAGTGACGAA 17212 Query 268387 CGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCAC-GCGAACATGC 268445 || ||||||| | || || ||||||||||| | || ||||| ||| || ||||||| Sbjct 17213 GGTTGGGCCACGTCGGGGACTTTCGTGGTTGAATAAAATCCCGTT-CACGGCAAACATGC 17271 Query 268446 CATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACG 268505 | || || || || | ||||||||| ||||| | || ||| ||| || || |||| | Sbjct 17272 CGTAGGCTTCGCGATGGTTCACGACACTCCAGAAGGCGAACTGCTTCGCGACACCGTAGG 17331 Query 268506 GAGAACGTGGATGGAAGGGCGTCGTGATC-TTTTGAGGGATTTCTCGGACTTTGCCAAAG 268564 | || || || ||||| || ||| | || | || || | | || || ||||| | Sbjct 17332 GCGATCGCGGGTGGAACGGAGTC-TCCTCGTCCTGCGGTGTGGCGCGCACCTTGCCGTAC 17390 Query 268565 AGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGATT 268624 | || ||||| |||||||||||| |||| | ||| || || ||| | || | Sbjct 17391 AATTCACTCGTCGAAGCTTGGTAGAACCGCGTTGAGTGTTCTAGCCCACAGGTGCGCAAG 17450 Query 268625 GCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCG 268684 | ||||| || || | |||| || || || ||||| || ||||| | || ||| Sbjct 17451 CACGTGAGCAGGCGGAGCGCACCCACCCCGTCGACATCCGCCGTGTACTCGGCCAGTTCG 17510 Query 268685 AATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTGC 268744 || || |||| ||||||| | || |||| ||| || ||||| ||||| || || Sbjct 17511 AAGGAGACCTTGACATGGGACATCGCCCCCAAGTTGTACACCTCGTCCGGGCGTACGCGC 17570 Query 268745 TGCACGATCT-TCACGAGGTTCGTTGAGTCGGTGAGGTCTCCGTAGTGCA 268793 ||| |||| ||| | |||| | ||| ||||| || |||||||||| Sbjct 17571 GCCACAATCTGACAC-AAATTCGACGCGTCCGTGAGATCCCCGTAGTGCA 17619 >seq949 Length=22177 Score = 159 bits (176), Expect = 6e-34 Identities = 440/666 (66%), Gaps = 20/666 (3%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||||||||| ||| ||| ||||| |||||| ||||||||||| Sbjct 17870 CGCCACTGGATGTACTGGTTGGCCGTCTCGTCGAGGTGCGACTCAATGTGGTGGAAAGCG 17929 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || ||||| || | |||||| || ||||||||||| || | ||||| Sbjct 17930 TGCTGAGCCACGTAGGCGAAACGCATGGAAGGGTGCTTCCACACCTGACCGCTCGTCGGC 17989 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | |||| || || || | |||||| ||||| | ||| || ||||| ||||| |||| | Sbjct 17990 TCCACCTCACCCGTCAGCATCTTGATCAGCGTCGACTTACCGGCACCGTTGGGACCAAGC 18049 Query 225161 ACGCCAATCCGGGATGACATTGC-AAC--CTGCGAGTTCACGTTGCTGAAGATCTCAGGG 225217 || | || ||| |||| || || | |||| | |||| | | || ||| Sbjct 18050 ACAGCGATACGGCTCGACAGAGCGCACGTCACCGAGATGTTGTTGATCGACGGCTTTGGG 18109 Query 225218 ---CCAGTTTGGTA-AGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTGGA 225273 |||| |||| | | | || | ||| ||||||| ||||| Sbjct 18110 GTACCAG---GGTACTGGTACGAGCA-GTTGGTCAGACGAATGATGGGCTTACCCTTGTT 18165 Query 225274 AGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC---CTT 225330 | || | | ||||| || ||||| |||||| ||| |||| ||| || Sbjct 18166 CTTGATGTCAGCAAGGAAACCAGGCTCCGGGAACGTGAACT---TCACGTTGTCCGACTC 18222 Query 225331 CAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAG 225390 ||| |||||||| | |||||||| || | ||||| ||| ||||| || Sbjct 18223 CAGCTCGTAGTAGGCCTTGGCCTCGGGCTTCTGCTCAACGAAGAGAGAAAGGTTGCCCTT 18282 Query 225391 GTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAG 225450 | || | ||||| || ||||||| || | || | ||||| ||| || Sbjct 18283 ATAGATCTTCAGCTTACGG---GTCTCGTAGTGGATGATGTTGGTACACACGTTGTCGAG 18339 Query 225451 GAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGT 225510 ||||||||||||||||||||| |||||||| | || ||| || || | | |||| | Sbjct 18340 GAAGCCAGAGTCGTGGGACACCATGATGGAGGTGACAGTCGGCACGCTCGTCAGGTAGTT 18399 Query 225511 GATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGAT 225570 ||||| || ||||| |||| |||| |||||| || || || || || ||||| || Sbjct 18400 CTCAAGCCAGGCGACGTTCTTGACATCCAAGTGGTTCGTCGGCTCATCAAGCAGCAGAAT 18459 Query 225571 GTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAG 225630 |||||| | | || || || |||| || || ||||| ||||| || || || || Sbjct 18460 GTCAGCCTTCAGCAGCATAGCACGCGACAGCTCGAGTTTCATCTTCCAACCACCCGAAAG 18519 Query 225631 GGAGCC 225636 |||||| Sbjct 18520 GGAGCC 18525 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 224449 GTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAG 224508 ||||| ||| | || ||||| ||| ||| || | ||| || | ||| || ||||| Sbjct 17326 GTGAGTAATCATGACCACACCACCGTTGAAGTCCTTGATGGCCGAAGCAAGGGCACCAAG 17385 Query 224509 CGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCA 224568 ||| |||||||||||| |||||||||||||||| || | | | ||| ||| | |||| Sbjct 17386 CGAGTCGCGGTCAAGGTAGTTCGTCGGCTCATCAAGCACAAGGATGTGCGGGTTCAGCCA 17445 Query 224569 CAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGA 224628 || || ||| | | ||| | ||||||||||||||| || || || || || || ||||| Sbjct 17446 CATAGCGGCAGCGAGCACGACCTTCACCTTCTGACCACCGGACAGACCACGCATGCGCGA 17505 Query 224629 GTGAGTCGTGAATTCGG 224645 ||| || ||| |||| Sbjct 17506 GTGGGTACCGAACTCGG 17522 Score = 100 bits (110), Expect = 5e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876 |||||||||||| |||||||| || ||||| || || | ||| || ||| || || Sbjct 18703 GGGGAAGCCCTCAAGCTGGCCGTTGGCAATGGCGCGCATCAGCGTCGACTTACCACAACC 18762 Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936 |||||||||| || |||||| | | || ||||||| | || || | | |||||| Sbjct 18763 GTTGGGACCGCACAGACCGTAACGGTGGCCACGCTTGAGGCGAAGACGGGCGTTGTTCAG 18822 Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTC 225984 || ||| | ||||| || || || ||||||||||| | ||| ||||| Sbjct 18823 CAGAATCATACCACCGTAAGCGAGCGAGAACTCGCAGTTGCAAAGGTC 18870 >seq1050 Length=18215 Score = 158 bits (174), Expect = 2e-33 Identities = 176/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| ||||| || || || |||| |||| ||| ||||| ||||| || |||||||| | Sbjct 5460 TTTAGTTTCCACCACGCAGCCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGT 5401 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | ||| || || | || || || | |||||| |||||||| ||||| | || |||| Sbjct 5400 AGTCGCTCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGT 5341 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 |||| || ||||| |||||||| |||||||| ||| ||| ||||| | ||| | | Sbjct 5340 CGGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCGACG 5281 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||||| || ||||| || ||||||||||| |||||||| Sbjct 5280 GCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCAT 5226 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||| ||| ||||| ||||| || |||||||| || ||| Sbjct 5224 CCGCCACGCAGCCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 5165 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | || |||||||| || Sbjct 5164 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 5105 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| ||| ||| || || | ||| | | || || Sbjct 5104 ATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCAATCGAGTCCGACGGCTCCACG 5045 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | |||||||| || ||||| || ||||||||||| ||||||||| Sbjct 5044 TCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAAATCTGCATT 4997 >seq7744 Length=2697 Score = 140 bits (154), Expect = 6e-28 Identities = 381/572 (67%), Gaps = 20/572 (3%) Strand=Plus/Minus Query 10253 GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCC 10312 ||| | ||||||||| |||||||| | |||||| || || | ||| || |||||||| || Sbjct 1834 GTGCATGCCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCATGAGGCC 1775 Query 10313 CCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA--CCCTCCACG 10370 || || |||||||| |||| ||||||||| || ||||| ||||| |||||||| Sbjct 1774 GCGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAA--GAAGATGCCCTCCACA 1717 Query 10371 CACACCCAGGCGACGAGGCGCTCTGCGAAGGAG--CGGTCGCGCGAAA-AGTATTTCGAG 10427 | | || | || ||||| | | | || | ||||| | | | || ||| Sbjct 1716 GCTGCGAACGCCAGCAGACGCTCCGGGTACGACGACACTCGCGGGTCGCACCACTT-GAG 1658 Query 10428 -GCCCA---CGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAAG-AGCT 10482 ||||| |||| |||||| ||| |||||||| ||||| || || || || | Sbjct 1657 CGCCCAGTGCGCTTTCTTCTT---CACACACGGGATCGTATCGATGGCA-CGCAGCAGGT 1602 Query 10483 TGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCTCGCTGT 10542 || ||| || | |||| || | |||| |||||| || || ||| || Sbjct 1601 GGTCCTTCTCCGTTGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACACCTCTGAGT 1542 Query 10543 GGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCGTGACTT 10602 ||| | |||| || |||| || ||||||| || ||| || || |||| Sbjct 1541 GGATGTTCTCGATGGCGATCTGGAAACCGTAGAAGCAGCGGGCCTCCGGCACCTGCACTT 1482 Query 10603 CCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGC 10662 | | | ||||| || ||||||||| |||| ||||| |||||| | || |||||| Sbjct 1481 CATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGAAGAAGG 1422 Query 10663 CGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCA 10722 | || | ||||||||||||| ||||| | || |||| || | |||||| || Sbjct 1421 CCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGGTTCGC---CCAGTCCTTCA 1365 Query 10723 CATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACA 10782 || || || | | |||||| | |||||||| | ||| | ||||||||||||| Sbjct 1364 GGTCGTGCGCCAGGTCCAGCTCCTCGGCCGTCCAGAACGAGGCCTCCGCCTTCTTGTACA 1305 Query 10783 TCTGGAAAATGTCGGGGTACCGGATGGGGAAC 10814 |||| | | |||| | | | |||| |||||| Sbjct 1304 TCTGCCACACGTCGTGCTCCTGGATCGGGAAC 1273 >seq188 Length=43473 Score = 113 bits (124), Expect = 8e-20 Identities = 265/397 (67%), Gaps = 16/397 (4%) Strand=Plus/Plus Query 173082 ACGTCCTGAAGCAGGAAAAAATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGG 173141 ||||||| ||| ||| || ||||| || |||||||| ||||||||| | || |||| Sbjct 35697 ACGTCCTCAAGACGGAGCGCATCGACACCATCATGCACTTCGCTGCGCAGTCGCACGTGG 35756 Query 173142 ACAACTCGTTCGGTAACTCGCTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTC 173201 ||||||||||||| |||||| | | || | || || ||| || || || ||||| | Sbjct 35757 ACAACTCGTTCGGGAACTCGATCGAGTTCAGCAAGACCAATATCCTGGGCACGCACGTGC 35816 Query 173202 TCCTGGAATGCGCGAGGCTCTATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACG 173261 | ||||| |||||||| || || ||| | |||| ||| | ||| || |||| Sbjct 35817 TGCTGGAGGCTGCGAGGCTGCAT---GGGGTCAAAAGGTTTATCCACGTGAGCACGGACG 35873 Query 173262 AAGTATACGGCGAGAGCAGTCTGGGCAAAAAAGAAGGCCTCGATGAAC----ACTCGTCC 173317 | || ||||| || |||| | | | ||| |||||| | || Sbjct 35874 AGGTGTACGGAGAAGGCAGACCCG-------ACTCGGCGCCGATGACCGAGGACCATGTG 35926 Query 173318 CTCGAGCCAACAAACCCATATGCAGCAGCCAAGGCTGGTGCCGAAATGATGG-CACGTGC 173376 ||||| || || |||||||| || || | |||||||| || || | ||| || | || Sbjct 35927 CTCGAACCCACCAACCCATACGCGGCCACGAAGGCTGGCGCGGAGTTCCTGGTCAAGAGC 35986 Query 173377 ATATCACACATCGTACAAGCTACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCC 173436 | ||| |||| | || || ||| | ||| | ||||||| ||||| || || Sbjct 35987 -TTCCACCGCTCGTTCGGTCTCCCGACCATTATCACGAGGAGCAACAACGTGTACGGACC 36045 Query 173437 GCATCAGTTCCCCGAAAAAATGATCCCAAAATTTATT 173473 ||| |||| |||||| || | ||||| || || ||| Sbjct 36046 GCACCAGTACCCCGAGAAGCTCATCCCCAAGTTCATT 36082 >seq290 Length=37095 Score = 102 bits (112), Expect = 2e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 224498 AGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGG 224557 |||||||| |||| | ||||||| | | ||||||||||||||||||| | | | ||| Sbjct 19181 AGCGCGCCCAGCGCCGCGCGGTCCAAGTAGTTCGTCGGCTCATCCAGCACCAACAAGTGC 19122 Query 224558 GGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCG 224617 || | | ||||| ||| ||| | | || ||||| |||||||| ||||| ||||| ||| Sbjct 19121 GGACGGTTCCACATGGCAGCAGCGATGACGAGCTTGACCTTCTGGCCGCCCGAGAGACCG 19062 Query 224618 CGGATC 224623 |||||| Sbjct 19061 CGGATC 19056 Score = 84.2 bits (92), Expect = 4e-11 Identities = 135/189 (71%), Gaps = 5/189 (3%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||| ||||| | || | |||| ||||| ||||||| |||||||| | Sbjct 18692 CGCCACTGGAAGTACTCGACCGGCCTGCTGTCGAGGTGCTTCTCAACGTGGTGGAACGAG 18633 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || |||||||||| |||| | | | |||||||| | | |||| | ||||| Sbjct 18632 TGCTGCGCCACGTACGCCAGACGCACGGCGTGGTGCTTCCAGAAGGTGCCC-GTGTCGGG 18574 Query 225101 TGTGCCTCGCCGGT--GAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAA 225158 | | || || | ||| | |||||||||||| | ||| || || || ||| || | Sbjct 18573 CGA-CGTCTCCTGCACGAGCATCTTGATGAGCGTCGACTTACCGGCGCCGTTGACACCGA 18515 Query 225159 TCAC-GCCA 225166 |||| |||| Sbjct 18514 TCACAGCCA 18506 >seq58 Length=62634 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 178021 TCTCCACATCAAACTTCTTCGAAAAGATGTTGGTGAGCTTTGAACCGTATCCATTCCTGC 178080 |||| || | |||| ||||| |||||||||| ||||| | ||||| || || | || Sbjct 54340 TCTCGACCACGAACTCGTTCGAGAAGATGTTGGCCAGCTTGGCGCCGTAGCCGTTGCGGC 54399 Query 178081 CTGCGCCAGTCCTCTCCTGGGCATCATCAAAGTTCTCGCCCGTGAGGAGGTGGCCGAAGA 178140 | | ||| ||| || || || ||||| ||||||||| ||||||||||||| Sbjct 54400 CGCCCGTGGTCTTCTTCTTCTTGTCGTCGAAGTTGCTGCCCGTGAGCAGGTGGCCGAAGA 54459 Query 178141 TGAGCTCGGGCACATAG 178157 ||||||||||||| ||| Sbjct 54460 TGAGCTCGGGCACGTAG 54476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921513717678480