Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq511 488 7e-133 seq681 408 5e-109 seq4389 140 4e-28 seq773 109 7e-19 seq2163 93.3 5e-14 seq1121 93.3 5e-14 seq1167 86.0 8e-12 seq518 84.2 3e-11 >seq511 Length=29117 Score = 488 bits (540), Expect = 7e-133 Identities = 1070/1585 (68%), Gaps = 25/1585 (2%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||||| || || ||||| ||||| || |||||| || || || || | ||| Sbjct 18626 TCATCTTGGTCCTTGTACTTCTCCGCGTCGGAGACCATGCGATCGATCTCGTCCTGCGAC 18685 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | || ||| || |||||||| ||||| ||||| | || |||| | ||| || | Sbjct 18686 AGTCGCCCTTTGTCATTCGTGATCGTGATCTTGTTCTCCTTGCCCGTCGACTTCTCCACG 18745 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||||||| || || |||||||||||||| |||| | || || || | Sbjct 18746 GCTGACACGTTCAAAATGCCGTTGACATCAACATCGAACGTTACGTCGATCTGCGGGACA 18805 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || || || || | || || | || |||| | || || Sbjct 18806 CCGCGAGGCATGGGCGGGATGCCGTCCAGATTGAACTTTCCCAGTAGATGATTGTCACGG 18865 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | | | || || || || | || | ||| |||| | | || || ||| | Sbjct 18866 GTCATTGTGCGCTCGCCCTCGAACACCTGAATCAACACCCCGGACTGGTTGTCTGCATAC 18925 Query 6869 GTTGAGAA-GATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 || ||||| || | |||| ||| || ||||||||||| || | ||| || | || Sbjct 18926 GTCGAGAACGACTGCGTCTT-CTTGGAAGGAATCGTCGTGTTACGCGGGATGAGTTTCGT 18984 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | ||||| || || | ||||| ||||| || | |||||||| |||| ||| Sbjct 18985 CATGACTCCACCAGCGGTCTCCAACCCAAGCGACAGCGGGGCCACGTCCAGCAGTAGCAG 19044 Query 6988 GTCTTGAACAGATT--CGTTCCCTTCA---CCCGTTAAGATGGCGGCTTGGACCGTCGCC 7042 || || || || || | ||| || ||| ||| |||||||| || || || Sbjct 19045 ATCCTG--CAACTTGGCGGACGAGTCATTGCCACTTAGGATAGCGGCTTGCACGGTGGCT 19102 Query 7043 CCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAA 7102 || || ||||| || || || ||||| |||| || ||| || || || || ||| | Sbjct 19103 CCATAGGCGACTGCTTCGTCCGGGTTGATCGACTTGAACAGCTCCTTGCCATTGAAAAAG 19162 Query 7103 TCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCA 7162 ||| |||| || || | ||||||||| || ||||| || ||||||| ||| | || Sbjct 19163 TCCATCAACAACTGCTGCACTTTCGGGATACGAGTCGACCCTCCGACCAGAACCACCTCG 19222 Query 7163 TTCACTTTCGATTTATCGAT--CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATAC 7220 ||||||| | | | |||| ||| ||||| || | | | ||||| ||||| Sbjct 19223 TTCACTTG-GCTCT-TCGACAGCTTCGAGTCCCGCAACACCTGCGCCACAGGGTCCATCG 19280 Query 7221 ATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGA 7280 || ||||| || || | ||||| ||||| || || ||||| ||||||| | | || Sbjct 19281 TCTTGCGGAAGAACTCGTTGCACAGATCCTCGAACCGAGCACGCGTAATGGTCGAGTTGA 19340 Query 7281 AATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACG 7340 | || | ||||| | |||||||| || |||| | ||| |||| | || | || Sbjct 19341 AGTCGATACCGTCCAACAACGAATCGATCTCAAGATACGCTTGCGCCGAAGTGGACAGCG 19400 Query 7341 TTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAA 7400 ||||||| |||||||| |||||||| || | |||||| | ||||||| ||| |||| | Sbjct 19401 TTCGCTTCGCGCGCTCGCACGCCGTACGGAGACGACGCATCGCACGCGAGTTCCCGGTTA 19460 Query 7401 TATCTTTCTTATGTTTACGTTTAAACTCT-TCAGAGAAGTG-TCGAAGGAGTCTCGAATC 7458 ||| || || || || || || || ||| ||||| |||| || | || Sbjct 19461 GATCCTTGCGGTGCTTGCGCTTGAATTCGGTCAC-GAAGTACTCGACC-AGACGGTTGTC 19518 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 || ||||| ||||||||||| || || || ||||| || || || || ||||| ||| | Sbjct 19519 AAAGTCTTCGCCACCCAAGTGCGTGTCGCCTGCGGTGGCCTTCACCTCGAAGATGCCTTC 19578 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 ||| || | | | ||| || |||||||| || || ||||| ||||| || || ||||| Sbjct 19579 TTCGATCGTAAGGAGCGAGACGTCAAACGTTCCGCCTCCCAGATCAAAGATCAGCACGTT 19638 Query 7579 CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638 ||| || | ||||| || || ||||| || || || || ||||| || || || Sbjct 19639 GTGCTCGCCGCC---CTTCTTGTCCAGGCCGTAGGCAATGGCAGCAGCCGTCGGCTCGTT 19695 Query 7639 AATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698 || ||||| || |||||| ||||| |||| | || || ||||| ||||| || || Sbjct 19696 GATGATACGCAGGACGTTCAGCCCAGCGATAGCGCCAGCGTCCTTCGTAGCTTGGCGCTG 19755 Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758 ||| ||||| || || ||||| ||||| || || || | | | |||| ||| |||| || Sbjct 19756 CGAGTCGTTGAAATACGCCGGCACCGTCACCACGGCATTCTTCACTTGCTTGCCGATGTA 19815 Query 7759 CGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAA 7818 || || ||||| || ||| ||| | || ||||| || || ||||| || | | || Sbjct 19816 CGCCTCGGCGATCTCGCGCATCTTGATCAGCACCATGGACGAGATCTCCTCGGGCTGGAA 19875 Query 7819 CTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATG-GGTTTATCCGCAGCACCGGGGA 7877 | || | || | ||||| | || | | | || || || | | | | || | Sbjct 19876 CGTCTTGGACTCGCACTTAAACTGCACCACGA-CTTGAGGCTTGTTCTCCGGGCCACGAG 19934 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 | || || ||| ||| | || || || || || | | |||||| ||||| | | Sbjct 19935 TCACTTTGAACGGCCAGTGCTTGATGTCCGACTGCACTTCTGGGTCCGTGAACTTGCGGC 19994 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 |||| || ||||| ||||||| || ||||| | || |||||| || ||||||||| | Sbjct 19995 CGATGAGGCGCTTGACATCAAACACCGTGTTGTGGGCGTTCATAGCCACTTGGTTCTTGG 20054 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 |||| || ||||| ||||| || || ||||| ||||| |||||||| ||||| || | Sbjct 20055 CCGCATCACCGATCAGACGCTCGGTA---TCCGTGAACGCCACGTACGACGGGGTGGTGC 20111 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 | || || ||||| || || || || || ||||||||||| ||||| || || ||||||| Sbjct 20112 GGTTGCCCTGGTCATTGGCGATGATCTCCACGCGGTCGTTCTGCCACACACCAACGCACG 20171 Query 8118 AATACGTTGTTCCTAAATCAATACC 8142 | ||||| || || | |||||| || Sbjct 20172 AGTACGTCGTGCCCAGATCAATGCC 20196 >seq681 Length=24184 Score = 408 bits (452), Expect = 5e-109 Identities = 851/1265 (67%), Gaps = 17/1265 (1%) Strand=Plus/Plus Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946 ||||| | || | |||||| || | || || | || ||||| | ||| || || Sbjct 21192 TTCTTGGTGGGCACCGTCGTGTTACGCGCGATCAGCGTCGTCATGACACCGCCAGCCGTC 21251 Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTC 7006 || || || ||||||||||| ||||| |||| || | |||||| || ||| ||| || Sbjct 21252 TCCAGACCCAGAGACAGAGGAGTCACATCCAGCAGCAGCAGGTCCTG--CAGCTTC--TC 21307 Query 7007 C-------CTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 | | | || | | ||||| || ||||| || || ||||| ||||| ||||| Sbjct 21308 CGAGGAGTCGTTGCCGCTCAGAATGGCAGCCTGGACGGTGGCACCGTAGGCGACAGCCTC 21367 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119 ||| ||||| |||| || || | || || ||||| || | ||||| | || || || Sbjct 21368 ATCAGGGTTGATCGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCCGACAGCAGCTGCTG 21427 Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATC 7179 | || ||||| || || || |||||||||| |||| || | ||| | || Sbjct 21428 CACCTTGGGGATACGGGTGGAGCCACCGACCAGGACGACCTCGTGCACCTGGCTCTTGGA 21487 Query 7180 GATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239 | ||| | ||| || || || || || || ||||| || ||||| |||| Sbjct 21488 CAGCTTGGCGTCACGGAGGACCTTCTCCACGGGCTCCATGGTCTTGCGGAAGTAGTCGCC 21547 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 |||| ||||| ||||| |||||||| |||| | | ||| |||| ||| ||| | | Sbjct 21548 GCACATGTCCTCGAAACGAGCACGGGTGATGGTCGAGTTGAAGTCAATGCCATCGAACAG 21607 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 || || || |||||| | || |||| ||| || | ||| ||||| || ||||| || Sbjct 21608 AGAGTCGATCTCAATGTAAGCCTGGGCCGACGACGAAAGCGTACGCTTAGCACGCTCGCA 21667 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 || ||||| | |||||| || || ||| |||| | | || || || || || || Sbjct 21668 AGCAGTTCGCAGACGACGGAGAGCGCGCTGGTTCTCCGTGATGTCCTTGCGGTGCTTGCG 21727 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || ||||| | | |||||| | || | ||||| || |||||||||| ||| Sbjct 21728 CTTGAACTCCTGCGTGAAGTGGTCCACCAGACGGTTGTCGAAGTCCTCACCACCCAGGTG 21787 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || || || || || || || ||||| || | |||||| | || ||| || Sbjct 21788 CGTGTCACCAGCAGTGGCCTTCACCTCGAAGATGCCCTCCTCAATGGACAGCAGCGACAC 21847 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT 7599 ||| || ||||| ||||||||||| || || || ||||| || || | ||||| Sbjct 21848 ATCGAAGGTACCGCCACCCAGGTCGAAGATCAGCACGTTACGCTCACCGCC---CTTCTT 21904 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 || |||||||| || || || || ||||| || || || || ||||| || ||| || Sbjct 21905 GTCCAGACCGTAGGCAATGGCAGCGGCCGTGGGCTCGTTGATGATACGCAGGACGTTGAG 21964 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || ||||| | | || || || || || || || ||||| ||||| |||||||| || Sbjct 21965 ACCGGCAATGGCACCGGCGTCCTTGGTAGCCTGACGCTGCGAGTCGTTGAAGTAGGCGGG 22024 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||||| | || |||| | |||| | ||| |||| | | || || | || ||| Sbjct 22025 CACCGTGATCACGGCGTTCTTGACCTCCTTGCCGATGAAGGCCTCGGCCACCTCGCGCAT 22084 Query 7780 TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAA 7839 || | || ||||| || || ||||| || | | ||| || | || || || || Sbjct 22085 CTTAATCAGCACCATGGACGAGATCTCCTCGGGCTGGAACGTCTTGGACTCGCCCTTGAA 22144 Query 7840 ATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTT 7899 | || ||| || || || | || || | | ||| ||| ||| | || Sbjct 22145 CTGCACCGTGATCTGCGGCTTGTCGCCGGCGCCCGACGACATCTTGAACGGCCAGTGCTT 22204 Query 7900 CATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAA 7959 || ||| | ||||| ||||||| ||||| | ||||| |||||||| || || || Sbjct 22205 GATGTCGGCCTGGACGATGGGGTCCGAGAACTTGCGGCCGATCAGACGCTTGGCGTCGAA 22264 Query 7960 AACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTC 8019 || ||||| | | ||||||||| |||||||| || || || ||||| ||||| || Sbjct 22265 CACAGTGTTGTGCGCGTTCATGGCCACCTGGTTCTTGGCGGCATCACCGATCAGACGCTC 22324 Query 8020 ATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAAT 8079 | ||||| || || |||||||| ||||| || || || || |||||||| || || Sbjct 22325 ---GGTGTCCGTGAAGGCCACGTACGACGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGAT 22381 Query 8080 AATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAAT 8139 || || || |||||||| ||||| |||||||||||||| || || || || | || || Sbjct 22382 GATCTCCACACGGTCGTTCTGCCACACGCCGACGCACGAGTAGGTCGTGCCAAGGTCGAT 22441 Query 8140 ACCGA 8144 |||| Sbjct 22442 GCCGA 22446 >seq4389 Length=3772 Score = 140 bits (154), Expect = 4e-28 Identities = 453/696 (65%), Gaps = 17/696 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||| |||| ||| || || || ||| || || || || | ||| Sbjct 1943 TCGAAGTCCTCACCGCCCAGGTGGGTGTCACCGTTGGTGGCCAGCACCTCGAACACACCG 2002 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || |||||| | || | ||||| || ||||| ||||||||||| || | || ||| Sbjct 2003 CCGTCAATGGCCAGCAGAGTCACATCGAAGGTACCGCCACCCAGGTCGAAGACCAGGACG 2062 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | || | | ||||| || | ||||| || || || || ||||| || || Sbjct 2063 TTCTTCTCACCCTGCGACTTCTTGTCAATGCCGTAGGCAATGGCAGCAGCCGTAGGCTCG 2122 Query 7637 TTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || | || | | || || ||||| || | ||||| || || || || || Sbjct 2123 TTGATGATGCGCTGCACCG-TGAGACCGGCAATGGTACCGGCATCCTTGGTAGCCTGACG 2181 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || | ||||| |||||||| || ||||| ||||| ||||| || | |||| Sbjct 2182 CTGGGCGTCGTTGAAGTAGGCGGGCACCGTCACGACGGCGTCGAACACCTCGCGGCCGAT 2241 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || |||| ||| | ||||| ||||| || ||||| | || | ||| || | || Sbjct 2242 GTAGCCCTCCGAGATCTGCTTCATCTTGGTGAGCACCATGGCCGAGACCTCCTCGGGGGC 2301 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 ||||| | | || || || | || || ||||| | ||| || ||| | | Sbjct 2302 GAACTGGCGCTTCTCGCCCTTGACCTCCACCTCAATGAAGGGCTT-GCCG--TCCTTGTT 2358 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 | | || || | | ||| | ||| | || ||| | ||| |||| | Sbjct 2359 CACGAGCTCGTAGGGCAGCAGCTTCTTGTCGGCCTGCACCGACTTGTCGTTGTACTTGCG 2418 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||||| |||||||| |||| || | || || | ||||| |||| | |||||||| Sbjct 2419 GCCGATGAGACGCTTGACATCGAACAGCGTCTTCTCCGGGTTGATGGTGGCCTGGTTCTT 2478 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATT---TTCCGTAAACGCGACGTACGATGGGGT 8052 || |||| ||||| ||||| || | || ||| ||||||||||||| || || Sbjct 2479 GGCGCCGTCACCGATCAGACGCTCGTCGTTCGAGTCC---CACGCGACGTACGAGGGCGT 2535 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC---GCGGTCGTTTTGCCAGACGCC 8109 | || || || |||||||| || || || || || |||| || | ||| ||| Sbjct 2536 GATGCGGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTCTGGTCCTTGT---AGATGCC 2592 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 |||||||| || || || || | ||||| ||||| Sbjct 2593 CACGCACGAGTAGGTCGTGCCCAGGTCAATGCCGAT 2628 >seq773 Length=22196 Score = 109 bits (120), Expect = 7e-19 Identities = 171/245 (70%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 22579 GAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCACGAATCACCGAGACGG 22638 ||| | ||||| |||||||| || || || | |||||||||||| || |||| Sbjct 17281 GAAGCCTACGGCATGTTTGCCGTGAACGGGATTTTATTCAACCACGAAAGTCCCCGACGT 17222 Query 22639 GGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAATATCAGTGCAGGTAAA 22698 || || |||||| || || || || || | | ||| | ||| |||| |||| Sbjct 17221 GGCCCAACCTTCGTCACTCGCAAGATCACCCGAGCTGTTGTGCGTATTCGTGCTGGTATT 17162 Query 22699 CAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTGGGGTCATGCACGCGAT 22758 | || || | | | || ||||| || ||||||||||| ||||| || || ||||| Sbjct 17161 GAGAAGTGCCTCTTTGTGGGGAACCTCGACGCGAAACGAGACTGGGGCCACGCTCGCGAC 17102 Query 22759 TACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGAAGATTTTGTTATTGCA 22818 |||||| | || |||||| ||| | ||||| |||| ||||| ||||||||| |||| Sbjct 17101 TACGTGGAGTGCATGTGGCGAATGCTTCAACATGATACTCCGGATGATTTTGTTGTTGCT 17042 Query 22819 ACAGG 22823 || || Sbjct 17041 ACTGG 17037 >seq2163 Length=9429 Score = 93.3 bits (102), Expect = 5e-14 Identities = 195/288 (68%), Gaps = 11/288 (4%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||| |||| ||| || || || | || | ||||| || ||||| || Sbjct 4492 TCGAAGTCCTCACCGCCCAGGTGCGTGTCACCGCCCGTGGACTTGACCTCGAAGATGCCG 4551 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | | ||| ||||| || ||||| ||||||||||| || || || ||| Sbjct 4552 TTCTCGATGGACAGGATCGACACATCGAAGGTACCGCCACCCAGGTCGAAGATCAGCACG 4611 Query 7577 TT------CGTATCGTC---GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCC 7627 || | | |||| | | |||| | || || ||||| |||| || || ||| Sbjct 4612 TTGCAGGCCTTGCCGTCCGTGCCGGCGTTCGTGTCCAGGCCGTAGGCGAGGGCGGCGGCC 4671 Query 7628 GTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 || || || || || || || ||| || ||||||||| || | | || || || || Sbjct 4672 GTGGGCTCGTTGATGATGCGCTTGAC-GTCCAGGCCAGCGATGGAGCCGGCGTCCTTGGT 4730 Query 7687 CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGC 7734 || || || ||| ||||| |||||||| || || || || ||||| Sbjct 4731 CGACTGACGCTGCTGGTCGTTGAAGTAGGCGGGCACGGTGACCACCGC 4778 >seq1121 Length=17715 Score = 93.3 bits (102), Expect = 5e-14 Identities = 317/487 (65%), Gaps = 13/487 (3%) Strand=Plus/Plus Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || ||||||| | || || ||| | ||||| || || | | ||| ||| || ||| Sbjct 14992 CCGGCAATAGCACCAGCTTCCTTCATGGCTTGACGCTGGAAGTAGTTGAAGCAGCCCGAC 15051 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || |||| ||||||| | | || | || || || || | ||||| | || ||||| Sbjct 15052 ACTGTTATAACCGCGTACTTTACCTCTTTGCCTAGGTAGGTCTCCGCCGTCTCCCTCATT 15111 Query 7781 TTGGTAAGAACCAT--CGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAA 7838 || || | ||| |||||| |||| | | | ||||| ||| |||||||| || Sbjct 15112 TTATACAGCAGCATGGCGATGA--TCTCCACCGGCTCAAACGTTTTGGTTTCACCCTTGT 15169 Query 7839 AATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTT 7898 | | ||| | | | ||| ||||| | | || | |||| | ||| ||||| | Sbjct 15170 ACTGAACCACCACCTGGGGACTATCCTCTGGCCCACGCGCCACCTCAAACGGCCAATACT 15229 Query 7899 TCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCAT--C 7956 | || | || || || | | | ||||||||||||| ||||| | | ||||| | Sbjct 15230 TGATGTTCTCCTGCACTTCTGGATCCGAAAACTTTCGGCCGATTAATTG--GTGCATGCC 15287 Query 7957 AAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACG 8016 || | |||||| | | |||| | |||| ||| || || || ||||| |||| Sbjct 15288 GAAGATTGTGTTCCTTGCGTTCCTAATCATTTGACACTTGGCAGCTTCACCGATCAGACA 15347 Query 8017 TTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT-TCCCTTGGTCGTTCG 8075 || || ||||| ||||| || ||||| || |||| || ||||| | ||| | Sbjct 15348 CGCAGTA---TCCGTGAACGCCACATACGACGGCGTCGAGAAATATCCCTCTCT-GTTAG 15403 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 ||| || || ||||| || | |||| ||||| || | ||| |||| || || | || Sbjct 15404 GAATTATCTCCACGCGCTCATCGCGCCACACGCCCACACGTGAACACGTCGTGCCCAGAT 15463 Query 8136 CAATACC 8142 |||| || Sbjct 15464 CAATGCC 15470 >seq1167 Length=16615 Score = 86.0 bits (94), Expect = 8e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 184211 GCGTCACGCACGTTCT-TACATTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACC 184269 || |||||||| ||| || ||| || | ||| ||||| ||||| || || ||||| || Sbjct 14334 GCATCACGCACATTCAATAGCTTT-CCGCGAAGAGGAAACACACCATACTGGTCACGCCC 14276 Query 184270 AACAACTGAAAGACCAGCAATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAG 184329 |||||||| || ||||| | ||| || | || || ||||||||||| || | |||||| Sbjct 14275 AACAACTGCCAGTCCAGCCACTGCTAGGGCCTTAGCTGAATCACCTTCTGTCAAAATAAG 14216 Query 184330 AGTACACTTACCAGAGTGTGTGGTACCGGCTTTATTGGCATCGTCGAGTTTTGG 184383 | ||| | || ||| | | ||||| |||||| || ||||| || || Sbjct 14215 CGAACATTCACTTGAGCGAGGTCCGCCGGCGAGATTGGCGTCCTCGAGCTTAGG 14162 >seq518 Length=28556 Score = 84.2 bits (92), Expect = 3e-11 Identities = 179/265 (68%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 7534 CGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTT 7593 ||| ||||| || || || ||||||||||| || | | | | | | ||||| | Sbjct 17696 CGACACATCGAAGGTGCCGCCACCCAGGTCGAAGACGGCAATGACCTTGCCGTCGGC--- 17752 Query 7594 GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA 7653 ||| || | ||||| || | ||| || ||||| || || || || ||||| || Sbjct 17753 ---CTTGTCCATGCCGTAGGCCAGAGCGGCGGCCGTGGGCTCGTTGATGATACGCAGCAC 17809 Query 7654 GTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGT 7712 || ||| || || || ||||| || || || || || || || ||||| ||||| |||| Sbjct 17810 GTCCAGACCGGCGAT-CTTGCCGGCGTCCTTGGTGGCCTGACGCTGCGAGTCGTTGAAGT 17868 Query 7713 AGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATAT 7772 |||| || || || ||||| || | || || ||| || || | || ||| | | Sbjct 17869 AGGCGGGCACTGTGACGACGGCTTGGGTCACGGGCTTGCCCAGGAAGCCGTCGGCGGTCT 17928 Query 7773 CTTTCATTTTGGTAAGAACCATCGA 7797 | ||||| ||||| || ||||| || Sbjct 17929 CCTTCATCTTGGTGAGCACCATGGA 17953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635057901964560