Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq681 444 8e-120 seq511 376 3e-99 seq6026 239 6e-58 seq93 143 4e-29 seq720 131 2e-25 seq1009 109 7e-19 seq1023 100 4e-16 >seq681 Length=24184 Score = 444 bits (492), Expect = 8e-120 Identities = 1047/1577 (66%), Gaps = 8/1577 (1%) Strand=Plus/Minus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 || ||||| | || || || ||||| || || || || ||||| || || ||||| ||| Sbjct 22444 GGCATCGACCTTGGCACGACCTACTCGTGCGTCGGCGTGTGGCAGAACGACCGTGTGGAG 22385 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || ||| | || ||||| || ||||| || || || |||||||| ||||| || || | Sbjct 22384 ATCATCGCCAACGACCAGGGCAACCGCACCACCCCGTCGTACGTGGCCTTCACGGACACC 22325 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || ||||| | || |||||||| || || ||| || |||||| | ||| ||||| Sbjct 22324 GAGCGTCTGATCGGTGATGCCGCCAAGAACCAGGTGGCCATGAACGCGCACAACACTGTG 22265 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 || ||||| |||||||| || || |||||||| ||||| | ||||| | ||| || Sbjct 22264 TTCGACGCCAAGCGTCTGATCGGCCGCAAGTTCTCGGACCCCATCGTCCAGGCCGACATC 22205 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGT-GTGGCTGATAAGCCTATGATTAATGTTGA 195603 ||| ||||| | | | ||| ||| ||| | | || ||||| ||| | || | Sbjct 22204 AAGCACTGGCCGT-TCAAGATGTCGTCGGGCGCCGGCGACAAGCCGCAGATCACGGTGCA 22146 Query 195604 ATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAA 195663 || | || ||| || || ||||| || || ||||| |||||| ||||||| Sbjct 22145 GTTCAAGGGCGAGTCCAAGACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGATTAA 22086 Query 195664 GATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGT 195723 |||| ||| || || | ||||| || || || || | || || | || || Sbjct 22085 GATGCGCGAGGTGGCCGAGGCCTTCATCGGCAAGGAGGTCAAGAACGCCGTGATCACGGT 22026 Query 195724 ACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGG 195783 || || ||||||| || || || || ||||| || |||||||| | ||| ||||| || Sbjct 22025 GCCCGCCTACTTCAACGACTCGCAGCGTCAGGCTACCAAGGACGCCGGTGCCATTGCCGG 21966 Query 195784 TCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGA 195843 ||| ||| || | || ||||| || || || || ||||| ||||| || |||||||| Sbjct 21965 TCTCAACGTCCTGCGTATCATCAACGAGCCCACGGCCGCTGCCATTGCCTACGGTCTGGA 21906 Query 195844 CAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGA 195903 |||| |||| || || || || ||||||| || || ||||| ||||| || || Sbjct 21905 CAAG---AAGGGCGGTGAGCGTAACGTGCTGATCTTCGACCTGGGTGGCGGTACCTTCGA 21849 Query 195904 TGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATAC 195963 ||| || || || ||||| | || || ||||| || ||||| ||||||||||| || Sbjct 21848 TGTGTCGCTGCTGTCCATTGAGGAGGGCATCTTCGAGGTGAAGGCCACTGCTGGTGACAC 21789 Query 195964 TCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCG 196023 || || |||||||| || ||||| ||||| | || || | | |||||| Sbjct 21788 GCACCTGGGTGGTGAGGACTTCGACAACCGTCTGGTGGACCACTTCACGCAGGAGTTCAA 21729 Query 196024 TCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGC 196083 || ||| | || || || | | || | | ||||| ||||| || | ||||| Sbjct 21728 GCGCAAGCACCGCAAGGACATCACGGAGAACCAGCGCGCTCTCCGTCGTCTGCGAACTGC 21669 Query 196084 ATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTC 196143 || || ||||| || || || || || || |||| || | ||||||| || || Sbjct 21668 TTGCGAGCGTGCTAAGCGTACGCTTTCGTCGTCGGCCCAGGCTTACATTGAGATCGACTC 21609 Query 196144 GTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAA 196203 |||| || || ||||||||| | | || || |||||||| ||||| || || | Sbjct 21608 TCTGTTCGATGGCATTGACTTCAACTCGACCATCACCCGTGCTCGTTTCGAGGACATGTG 21549 Query 196204 CTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGAT 196263 | || | || | ||| ||||| || || || | || || |||||||| ||| | Sbjct 21548 CGGCGACTACTTCCGCAAGACCATGGAGCCCGTGGAGAAGGTCCTCCGTGACGCCAAGCT 21489 Query 196264 GGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGAT 196323 | ||| |||| | || | ||||| || || || || |||||||| || ||| | Sbjct 21488 GTCCAAGAGCCAGGTGCACGAGGTCGTCCTGGTCGGTGGCTCCACCCGTATCCCCAAGGT 21429 Query 196324 TCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGA 196383 || ||| |||| || ||||||||| || || ||||| |||||||||| || Sbjct 21428 GCAGCAGCTGCTGTCGGACTTCTTCAACGGCAAGGAGCCCAACAAGTCGATCAACCCTGA 21369 Query 196384 TGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGA---CAA 196440 ||| || || || || ||||| |||| |||||||| ||||| || || | Sbjct 21368 TGAGGCTGTCGCCTACGGTGCCACCGTCCAGGCTGCCATTCTGAGCGGCAACGACTCCTC 21309 Query 196441 TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAAC 196500 | || | || || || ||||| || ||||| | || | || |||||||| || || Sbjct 21308 GGAGAAGCTGCAGGACCTGCTGCTGCTGGATGTGACTCCTCTGTCTCTGGGTCTGGAGAC 21249 Query 196501 AGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGA 196560 || || ||||| ||||| | | || | | ||||| || | || || |||||| Sbjct 21248 GGCTGGCGGTGTCATGACGACGCTGATCGCGCGTAACACGACGGTGCCCACCAAGAAGTC 21189 Query 196561 ACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGG 196620 || || || ||||| | || || || || ||||| | || || || | || || Sbjct 21188 GCAGACGTTCTCGACGTACGCTGACAACCAGCCTGGTGTGCTGATCCAGGTGTTCGAGGG 21129 Query 196621 AGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCC 196680 || || || | || ||| | || || || | ||| | || || || || Sbjct 21128 CGAGCGTTCGATGACCCGCGACAACAACCTGCTGGGCAAGTTCAACCTGGACGGCATCCC 21069 Query 196681 AGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAAT 196740 | ||| | ||||| || |||||| | || |||||| || ||||| || || || Sbjct 21068 GCCCATGCCCCGTGGTGTCCCCCAGATTGACGTGACCTTCGACATTGACGCGAACGGCAT 21009 Query 196741 TCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAA 196800 || ||||| | || | ||| ||| | | ||||| | ||||| ||| ||||| Sbjct 21008 CCTGAACGTGTCGGCCGTGGAGAAGTCGACGGGCAAGGAGAACAAGATCACGATCACCAA 20949 Query 196801 TGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTA 196860 |||||||| || || || ||| || ||||| || |||||| || || || ||||| Sbjct 20948 CGACAAGGGCCGTCTGTCCCAGGCTGACATTGACCGCATGGTTTCTGAGGCCGAGAAGTA 20889 Query 196861 CAGGGAAGAAGACGAGG 196877 || | || ||||||| Sbjct 20888 CAAGTCGGAGGACGAGG 20872 >seq511 Length=29117 Score = 376 bits (416), Expect = 3e-99 Identities = 1043/1585 (66%), Gaps = 26/1585 (2%) Strand=Plus/Minus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 || || ||| | || || || ||||| || |||||||| ||||| || || || || ||| Sbjct 20196 GGCATTGATCTGGGCACGACGTACTCGTGCGTTGGTGTGTGGCAGAACGACCGCGTGGAG 20137 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || ||| | |||||||| || ||||| || || || |||||||| || || || |||| Sbjct 20136 ATCATCGCCAATGACCAGGGCAACCGCACCACCCCGTCGTACGTGGCGTTCACGGATACC 20077 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || ||||| | || ||||| || || || || ||||||||| | ||| || || Sbjct 20076 GAGCGTCTGATCGGTGATGCGGCCAAGAACCAAGTGGCTATGAACGCCCACAACACGGTG 20017 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 ||||| | ||||| || || || |||||||| |||| |||| || || || Sbjct 20016 TTTGATGTCAAGCGCCTCATCGGCCGCAAGTTCACGGACCCAGAAGTGCAGTCGGACATC 19957 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAA 195604 ||| ||||| | | |||| || || || | |||||| | | || || | Sbjct 19956 AAGCACTGGCCGTTCAAAGTGACTCGTGGCCCGGAGAACAAGCCTCA-AGTCGTGGTGCA 19898 Query 195605 TTTCACG-GTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAA 195663 || | | | ||| || || ||||| || || ||||| |||||| |||| || Sbjct 19897 GTTTAAGTGCGAGTCCAAGACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGATCAA 19838 Query 195664 GATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGT 195723 |||| |||| || || | | ||| || || ||||| |||| || ||||| || Sbjct 19837 GATGCGCGAGATCGCCGAGGCGTACATCGGCAAGCAAGTGAAGAATGCCGTGGTGACGGT 19778 Query 195724 ACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGG 195783 || || || |||| || || || || || || || |||||||||| ||||| || || Sbjct 19777 GCCGGCGTATTTCAACGACTCGCAGCGCCAAGCTACGAAGGACGCTGGCGCTATCGCTGG 19718 Query 195784 TCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGA 195843 || ||| || | || ||||| || || || || ||||| ||||| || || ||||| Sbjct 19717 GCTGAACGTCCTGCGTATCATCAACGAGCCGACGGCTGCTGCCATTGCCTACGGCCTGGA 19658 Query 195844 CAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGA 195903 |||| |||| || || | || || ||||||||||||| || || || |||||||| Sbjct 19657 CAAG---AAGGGCGGCGAGCACAACGTGCTGATCTTTGATCTGGGAGGCGGAACGTTTGA 19601 Query 195904 TGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATAC 195963 ||||| || || | || |||| || || ||||| || ||||| || || || || || Sbjct 19600 CGTCTCGCTCCTTACGATCGAAGAAGGCATCTTCGAGGTGAAGGCCACCGCAGGCGACAC 19541 Query 195964 TCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGA-TGAGTTC 196021 || | ||||| ||||| || || ||||| || || || | ||| || ||| Sbjct 19540 GCACTTGGGTGGCGAAGACTTTGACAACCGTCTGGTCGAGTACTTCG--TGACCGAATTC 19483 Query 196022 CGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACT 196081 || ||| | || ||| | | || || | | || | ||||| || | || Sbjct 19482 AAGCGCAAGCACCGCAAGGATCTAACCGGGAACTCGCGTGCGATGCGTCGTCTCCGTACG 19423 Query 196082 GCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGAT 196141 || || || || || || ||||| || || || |||| ||| | ||||||| ||| Sbjct 19422 GCGTGCGAGCGCGCGAAGCGAACGCTGTCCACTTCGGCGCAAGCGTATCTTGAGATCGAT 19363 Query 196142 TCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGA---G 196198 |||||||| ||||| || |||||| | | || ||||| ||||| || || || || | Sbjct 19362 TCGTTGTTGGACGGTATCGACTTCAACTCGACCATTACGCGTGCTCGGTTCGAGGATCTG 19303 Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCA 196258 | ||| || || || | ||| ||||| ||||| | || || | || ||| | Sbjct 19302 TGCAAC---GAGTTCTTCCGCAAGACGATGGACCCTGTGGCGCAGGTGTTGCGGGACTCG 19246 Query 196259 AAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCG 196318 ||| || ||| | || | || | || || || ||||| || || ||||| ||| Sbjct 19245 AAGCTGTCGAAGAGCCAAGTGAACGAGGTGGTTCTGGTCGGAGGGTCGACTCGTATCCCG 19186 Query 196319 AAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAAAACGATCAA 196377 || | || ||| || || | | ||| |||||| || || | ||| ||||||| Sbjct 19185 AAAGTGCAGCAGTTG-TTGATGGACTTTTTCAATGGCAAGGAGCTGTTCAAGTCGATCAA 19127 Query 196378 CCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGA 196437 |||||| |||||||| || ||||| || |||| || || ||||| || || ||| Sbjct 19126 CCCGGACGAAGCAGTCGCCTATGGAGCCACCGTGCAAGCCGCTATCCTAAGTGGCAATGA 19067 Query 196438 CAATAAT-----AACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGT 196492 | | | || | || ||||| || || || || || || || | || || || Sbjct 19066 C--TCGTCCGCCAAGTTGCAGGATCTGCTACTGCTGGACGTGGCCCCGCTGTCGCTTGGG 19009 Query 196493 CTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACT 196552 | || || || ||||| || ||||| ||| | || | ||||| || ||||| | Sbjct 19008 TTGGAGACCGCTGGTGGAGTCATGACGAAACTCATCCCGCGTAACACGACGATTCCTTCC 18949 Query 196553 AAGAAGGAACAAGTC-TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGT 196611 ||||| || |||| || || |||||| | || || || | || || ||||| || Sbjct 18948 AAGAA-GACGCAGTCGTTCTCGACGTATGCAGACAACCAGTCCGGGGTGTTGATTCAGGT 18890 Query 196612 ATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGAC 196671 | || || || ||| | | || || |||||||| |||| ||| || || Sbjct 18889 GTTCGAGGGCGAGCGCACAATGACCCGTGACAATCATCTACTGGGAAAGTTCAATCTGGA 18830 Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731 || || || | || | ||||| || ||||| | || |||||| | || | Sbjct 18829 CGGCATCCCGCCCATGCCTCGCGGTGTCCCGCAGATCGACGTAACGTTCGATGTTGATGT 18770 Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791 || || ||| | ||||| |||| | ||| ||| | | ||||| | ||||| Sbjct 18769 CAACGGCATTTTGAACGTGTCAGCCGTGGAGAAGTCGACGGGCAAGGAGAACAAGATCAC 18710 Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 ||| || |||||||| ||||| || || |||| || || || || ||||| || || Sbjct 18709 GATCACGAATGACAAAGGGCGACTGTCGCAGGACGAGATCGATCGCATGGTCTCCGACGC 18650 Query 196852 GGAAAAGTACAGGGAAGAAGACGAG 196876 ||| ||||||| ||| |||| ||| Sbjct 18649 GGAGAAGTACAAGGACCAAGATGAG 18625 >seq6026 Length=3836 Score = 239 bits (264), Expect = 6e-58 Identities = 969/1519 (64%), Gaps = 12/1519 (1%) Strand=Plus/Minus Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || ||| | || ||||| || ||||| || || || || ||||| ||||| || || | Sbjct 3612 ATCATCGCCAACGACCAGGGTAACCGCACCACCCCGTCATACGTGGCCTTCACGGACACC 3553 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || || || | || || || || || || ||| || |||||| | ||| || || Sbjct 3552 GAGCGCCTGATCGGCGACGCTGCCAAGAACCAGGTGGCCATGAACGCGCACAACACGGTG 3493 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 || ||||| ||||| || |||||||||||||| || || | || |||| ||| || Sbjct 3492 TTCGACGCCAAGCGCCTCATTGGTCGCAAGTTCTCCGACCCGGTGGTGCAAGCCGACATC 3433 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTG--TGGCTGATAAGCCTATGATTAATGTTG 195602 ||| ||||| | | | ||| | | ||| | ||| || ||||| ||| | || Sbjct 3432 AAGCACTGGCCGT-TCAAGATCTCGTCGGGGCCTGGA-GACAAGCCGCAGATCACGGTGC 3375 Query 195603 AATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTA 195662 | || | || |||| || || ||||| || || ||||| |||||| |||| | Sbjct 3374 AGTTCAAGGGCGAGACCAAGACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGATCA 3315 Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 ||||| ||| || || | ||||| || || || || | || || | || | Sbjct 3314 AGATGCGCGAGGTGGCTGAGGCCTTCATCGGCAAGGAGGTCAAGAACGCCGTGATCACGG 3255 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || || ||||| || |||||||| | ||| ||||| | Sbjct 3254 TGCCCGCCTACTTCAACGACTCGCAGCGTCAGGCTACCAAGGACGCCGGTGCCATTGCCG 3195 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 |||| ||| || | || ||||| || || || || ||||| ||||| || || |||| Sbjct 3194 GTCTCAACGTCCTGCGTATCATCAACGAGCCCACGGCCGCTGCCATTGCCTACGGCCTGG 3135 Query 195843 ACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTG 195902 ||||| |||| || || || || ||||||| || || || || || || || | Sbjct 3134 ACAAG---AAGGGCGGTGAGCGTAACGTGCTGATCTTCGACCTGGGCGGCGGCACCTTCG 3078 Query 195903 ATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATA 195962 | || || || || | || || | || || ||||| || ||||| || || || || | Sbjct 3077 ACGTGTCGCTCCTGAGCATCGAGGAGGGCATCTTCGAGGTGAAGGCCACCGCAGGCGACA 3018 Query 195963 CTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGAGTTC 196021 | || || ||||| || || ||||| || || || || || || | |||||| Sbjct 3017 CGCACCTGGGTGGCGAGGACTTCGACAACCGCCTGGTCGAGTACTTCGT-GCAGGAGTTC 2959 Query 196022 CGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACT 196081 || ||| | || || | | || | | || || || || | | || Sbjct 2958 AAGCGTAAGCACCGCAAGGACCTGACGCAGAACCAGCGCGCGCTGCGGCGTTTGCGCACG 2899 Query 196082 GCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGAT 196141 || || || || ||||| || || || || || |||| || | | ||||| || Sbjct 2898 GCGTGCGAGCGCGCCAAGCGTACGCTTTCATCATCGGCGCAGGCGTACATCGAGATCGAC 2839 Query 196142 TCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTA 196201 ||| ||| ||| | | |||||| | | || || || || || || || || || | Sbjct 2838 TCGCTGTACGACAGCGTGGACTTCAACTCGACCATCACGCGCGCGCGGTTCGAGGACCTG 2779 Query 196202 AACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAG 196261 || | || | ||| ||||| || || || | || || || ||||| ||| Sbjct 2778 TGTGGCGACTACTTCCGCAAGACCATGGAGCCCGTGGAGAAGGTGCTGCGCGACGCCAAG 2719 Query 196262 ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAG 196321 || ||| |||| | || | || || ||||| || || || ||||| || ||| Sbjct 2718 CTGTCCAAGAGCCAGGTGCACGAGGTGGTGCTCGTGGGCGGCTCGACGCGTATCCCCAAG 2659 Query 196322 ATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCG 196381 | || ||| |||| || |||||||| || || ||||| |||||||||| Sbjct 2658 GTGCAGCAGCTGCTGTCCGAGTTCTTCAACGGCAAGGAGCCCAACAAGTCGATCAACCCA 2599 Query 196382 GATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGAC--- 196438 || || || || || || ||||| | || ||||| || || || || ||| Sbjct 2598 GACGAGGCCGTCGCGTACGGTGCCACGGTGCAGGCGGCCATCCTGAGCGGCAACGACTCG 2539 Query 196439 AATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAA 196498 | || | || || | ||||| || || || | || | || ||||| || || Sbjct 2538 TCGGAAAAGCTGCAGGACTTGCTGCTGCTGGACGTGACGCCGCTGTCGCTGGGCCTGGAG 2479 Query 196499 ACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAG 196558 || ||||| ||||| ||||| | | || | | ||||| || | ||||| |||||| Sbjct 2478 ACGGCGGGCGGTGTCATGACGACGCTGATCGCGCGTAACACGACGGTGCCGACCAAGAAG 2419 Query 196559 GAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAA 196618 || || || ||||| | || || || || ||||| | || || || | || Sbjct 2418 TCGCAGACGTTCTCGACGTACGCGGACAACCAGCCCGGTGTGCTGATCCAGGTCTTCGAG 2359 Query 196619 GGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATT 196678 || || ||||| | || ||| | || || || | ||| | || || || Sbjct 2358 GGCGAGCGCTCGATGACCCGCGACAACAACCTGCTGGGCAAGTTCAACCTGGACGGCATC 2299 Query 196679 CCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGA 196738 || | ||| | || || || |||||| | || |||||| || ||||| || || Sbjct 2298 CCGCCCATGCCCCGTGGCGTGCCGCAGATTGACGTGACCTTCGACATCGACGCGAACGGC 2239 Query 196739 ATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACC 196798 || || ||||| | || | ||| ||| | | ||||| | ||||| ||| || Sbjct 2238 ATCCTGAACGTGTCGGCCGTGGAGAAGTCGACAGGCAAGGAGAACAAGATCACGATCACG 2179 Query 196799 AATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAG 196858 || |||||||| || || ||| ||| || || || || ||||| || || || ||| Sbjct 2178 AACGACAAGGGTCGCCTCTCTCAGGCCGAGATCGACCGCATGGTGGCGGAGGCCGAGAAG 2119 Query 196859 TACAGGGAAGAAGACGAGG 196877 |||| | || ||||||| Sbjct 2118 TACAAGTCGGAGGACGAGG 2100 >seq93 Length=57835 Score = 143 bits (158), Expect = 4e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || || || || || || ||||| || || || ||| |||| Sbjct 55316 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 55375 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| |||| ||||| || || || || ||||| || || || ||| Sbjct 55376 GACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAAGAGGGCATCCCGCCTGACCAG 55435 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || |||||||| || || || || || || |||||| Sbjct 55436 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACAAC 55495 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| |||||||| || || ||||| || || | ||||| ||||| Sbjct 55496 ATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTTCGTGGTGG 55542 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || || || || || || ||||| || || || ||| |||| Sbjct 54860 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 54919 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| |||| ||||| || || || || ||||| || || || ||| Sbjct 54920 GACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAAGAGGGCATCCCGCCTGACCAG 54979 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || |||||||| || || || || || || |||||| Sbjct 54980 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACAAC 55039 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| |||||||| || || ||||| || || | || || ||||| Sbjct 55040 ATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGG 55086 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || || || || || || ||||| || || || ||| |||| Sbjct 55088 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 55147 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| |||| ||||| || || || || ||||| || || || ||| Sbjct 55148 GACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAAGAGGGCATCCCGCCTGACCAG 55207 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || |||||||| || || || || || || |||||| Sbjct 55208 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACAAC 55267 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| |||||||| || || ||||| || || | || || ||||| Sbjct 55268 ATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGG 55314 >seq720 Length=23280 Score = 131 bits (144), Expect = 2e-25 Identities = 261/380 (69%), Gaps = 15/380 (4%) Strand=Plus/Plus Query 198579 CCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTT 198638 || ||||| ||||| || || || || |||| || ||||| | ||||| ||||| Sbjct 13115 CCCGGTACGGGTAAGACGCTGCTGGCGAAGGCTACGGCTGGTGAGGCCAGTGTGCCCTT- 13173 Query 198639 CTTCAGTG-CTCCGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGT 198697 |||||| ||| | || |||||||||||||||||| ||||| || | || || Sbjct 13174 CTTCAGCATCTCTGGTTCGGATTTCATCGAGATGTTCGTCGGTGTGGGGCCGTCCCGTGT 13233 Query 198698 CCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTCATTGATGAGAT 198757 || || || || || | || || | |||| || || ||| | ||||||||||| || Sbjct 13234 GCGTGACCTGTTCAAGGAGGCGCGCGCAAATGCCCCGTGCATCGTGTTCATTGATGAAAT 13293 Query 198758 TGACGCTGTTG-----GTAAGAAGCGTGGTGGAACTACTACACCTGGTAATGATGAGCGT 198812 ||| ||||| | | | | ||| || | |||| || | || || || |||||| Sbjct 13294 TGATGCTGTGGCCCGCGCACGTAGCAAGG-GCAACTTCT-CGGGCGGCAACGACGAGCGT 13351 Query 198813 GAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGAC---AATGAGACTGGT 198869 || | ||| | |||||| | || ||||||||||||||| || | |||| ||| Sbjct 13352 GAAAACACGCTAAACCAGTTGCTGGTTGAGATGGATGGTTTCAACTCGAGTGAG---GGT 13408 Query 198870 ATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCC 198929 | |||||| |||||| ||| || | ||| ||||| || | || | || |||||| Sbjct 13409 GTGGTGGTGCTTGCTGGTACGAACCGCGCTGACATCCTTGACAAGGCCATTCTGCGTCCC 13468 Query 198930 GGTCGATTCGACCGTAAGAT 198949 || ||||||||||| |||| Sbjct 13469 GGGCGATTCGACCGGCAGAT 13488 >seq1009 Length=18926 Score = 109 bits (120), Expect = 7e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || ||||| || || || ||| |||| Sbjct 8303 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCGTCC 8244 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || ||||| ||||| || || || ||| Sbjct 8243 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 8184 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || ||||| || || || || || || | || |||||| Sbjct 8183 CAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTATCGGACTACAAC 8124 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 8123 ATCCAGAAGG 8114 >seq1023 Length=18726 Score = 100 bits (110), Expect = 4e-16 Identities = 253/380 (67%), Gaps = 10/380 (3%) Strand=Plus/Minus Query 78041 ATGTTTATTCACGCA----ACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGAT 78096 |||||| |||||||| || || || | ||||| || || || || || ||||| | Sbjct 3838 ATGTTT-TTCACGCATGCCACCCCGACACTTTTTAACGCCGGCACGCCGCGCCCACAACT 3780 Query 78097 GTCATCTTGTTTCCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCT 78156 ||| ||||| |||||| | || | | || ||||| ||| | || || |||| || | Sbjct 3779 GTCGTCTTGCTTCCTATTGGCCATGCAAGACGACTCAATTGAAGGCATTTACGACACGTT 3720 Query 78157 CACAGAGTGTGCTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCA-TATTCACGATG 78215 | | ||||| || ||||| ||||| || ||||| || | ||| ||| ||| | Sbjct 3719 AAAGCAATGTGCCTGTATCTCTAAATGGGCCGGAGGTATTGG-CATCAGTATGCACAACA 3661 Query 78216 TTCGTGCAAACAAGTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTA 78275 | || || | ||| | || |||| || || || ||| |||| || || || | Sbjct 3660 TCCGAGCCACCAACAGCTACATCCGAGGCACGAACGGCTCGTCCAATGGCATCATCCCCA 3601 Query 78276 TGCTTAGGGTATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG---AAGG 78332 |||| |||| || || | || || || || || |||| | || | | | |||| Sbjct 3600 TGCTGCGGGTGTTTAACGACACCGCGCGGTACGTGGACCAGGGCGGAGGCAAGCGTAAGG 3541 Query 78333 GGTCATTCGCTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTC 78392 | || ||||| || || | || ||||||||||| ||||| | || || ||||| || | Sbjct 3540 GCTCCTTCGCCATCTATTTGGAGCCTTGGCACGCAGATGTGTTCGAGTTCTTGGACCTCC 3481 Query 78393 GTCTCAACCAGGGTGACGAG 78412 || ||||| || ||||| Sbjct 3480 GTAAGAACCACGGCAACGAG 3461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657784821576480