Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14]
9,434 sequences; 74,863,594 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 268 1e-65
seq7744 205 1e-46
seq982 199 6e-45
seq584 196 8e-44
seq994 183 5e-40
seq12 179 6e-39
seq1023 159 5e-33
seq198 100 5e-15
seq419 95.1 2e-13
seq3551 91.5 2e-12
seq246 91.5 2e-12
seq123 89.7 8e-12
seq1696 86.0 1e-10
>seq2029
Length=11293
Score = 268 bits (296), Expect = 1e-65
Identities = 354/483 (73%), Gaps = 10/483 (2%)
Strand=Plus/Plus
Query 2018916 CCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCC 2018975
|||||| | || |||||||| ||| ||||| | ||| | ||||||||| || |
Sbjct 6339 CCGTGGGTGGAGAAGTACCGGCCGCGCGTGCTGGCGGACGTGGTGGGCAACCGCGACACG 6398
Query 2018976 GTTGCCTACCTCAAGGCGCTGGCCGCCGACGG-CAACATGCCCAACCTCTTGCTGGCGGG 2019034
|| || || |||| |||| || | ||| ||||||| | ||||| | ||| ||||
Sbjct 6399 GTGGCGAGTCTGCAGGCCATGGC-GCAGGCGGGCAACATGACGAACCTGATCCTGTCGGG 6457
Query 2019035 CCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGC 2019094
|||||| ||||||||||||||||||||||| ||| |||||||||| ||| ||||||
Sbjct 6458 CCCGCCGGGCACGGGCAAGACCACGAGCATTTTGTGTCTGGCGCGCGAGCTGCTGGGCG- 6516
Query 2019095 GGCCGCC-GACG-AGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTC 2019152
|| || || | |||| ||||| || ||||| ||||| ||||| |||||| | |||
Sbjct 6517 -GCAGCATGAAGCAGGCGGTGCTGGAGCTCAACGCGTCGGACGACCGCGGCATCGACACG 6575
Query 2019153 GTGCGTAGAATCATCAAGCA--TCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCC 2019210
||||| || | |||||| || ||| | || | || || || || |||||||
Sbjct 6576 GTGCGCAGTAAGATCAAGATGTTCGCGCAGCAGAAGGTGACG--CTACCCCCGGGCCGCC 6633
Query 2019211 ACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCC 2019270
||||| | | ||||| || |||||||||| | | ||||| |||||||||||||| || |
Sbjct 6634 ACAAGATCGTGATCCTGGACGAGGCCGACTCCATGACGTCCGCGGCCCAGCAGGCGCTGC 6693
Query 2019271 GATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGT 2019330
| |||||||| | | | | ||| ||||| || |||||||||||||||| |||
Sbjct 6694 GCCGCACCATGGAGATCTTCTCGGCCACCACGCGCTTCGCGCTGGCCTGCAACAACTCGA 6753
Query 2019331 CGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCG 2019390
| | | |||| ||| || |||||||||| ||||||||| |||||| |||| || |||
Sbjct 6754 CCAAGATCATTGAACCCATCCAGAGCCGCTGCGCCATCCTGCGCTACACGCGGCTGCCCG 6813
Query 2019391 ACG 2019393
|||
Sbjct 6814 ACG 6816
>seq7744
Length=2697
Score = 205 bits (226), Expect = 1e-46
Identities = 242/327 (74%), Gaps = 3/327 (1%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| ||||| || ||||||| ||||| |||| ||||| ||||||||||||||||||
Sbjct 1827 CCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCATGAGGCCGCGCTTC 1768
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| ||||||| ||||| ||||||||| ||||||||||| || || || ||
Sbjct 1767 TTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACAGCTGCGAAC 1708
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
| | || ||||| | | | || | | || | |||||| | ||||||
Sbjct 1707 GCCAGCAGACGCTCCGGGTACGACGACACTCGCGG---GTCGCACCACTTGAGCGCCCAG 1651
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580
| || || ||| |||| | || | ||| |||||||| || | ||||||||||||||
Sbjct 1650 TGCGCTTTCTTCTTCACACACGGGATCGTATCGATGGCACGCAGCAGGTGGTCCTTCTCC 1591
Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640
| ||||||| ||| ||||| ||||| ||||| || ||||||||||||||| |||
Sbjct 1590 GTTGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACACCTCTGAGTGGATGTTCTCG 1531
Query 794641 ATGGCGATCTGGAAGCCATAAAAGCAG 794667
|||||||||||||| || || ||||||
Sbjct 1530 ATGGCGATCTGGAAACCGTAGAAGCAG 1504
Score = 167 bits (184), Expect = 4e-35
Identities = 174/224 (78%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952
|| || ||||| | ||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 2276 ACACCGGCCTTCGAGTACTCGCCCACGCGCTTCTCGAAAAAGTTGGTCTTGCCCTGCAGC 2217
Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGT-GCTTCTCG-CAC-CCG 794009
||||||| |||||||| ||||||||| | | | || || | | ||| ||| ||
Sbjct 2216 GAGATCATGTCCATCCAGTCGAACGGGTT---CTTTACGTTGTAGATCTTCGACACACCC 2160
Query 794010 AGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069
||||| ||||| |||||||| ||||| || ||||||||||||||||| | | ||||
Sbjct 2159 AGCGAGTACAGCAGACGGTCGGCCACGAACTCGATGTACTGGCACATGAGCCCCGAGTTC 2100
Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTT 794113
|||||||| ||| |||| || ||||| || | || ||||| ||
Sbjct 2099 ATGCCGATCAGCTCCACAGGGAGCGAGTCACGCACGAACTCGTT 2056
Score = 165 bits (182), Expect = 1e-34
Identities = 206/278 (74%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200
|| || | |||||| || || || || || || ||||| |||||||||||| |
Sbjct 1509 AAGCAGCGGGCCTCCGGCACCTGCACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTC 1450
Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260
||||||||||||||||| ||||| ||||| || ||||||||||| ||| ||||||| |
Sbjct 1449 ACGATGCCGTCGCTGGCAGCGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTG 1390
Query 796261 TCGCTGAGCGAGACCCAGTGGACCGTGTCG-GCGCCGAGGTCGACCTCCTCGGCGGTCCA 796319
|| | || |||||| | |||| ||||| ||||| | ||||||||| |||||
Sbjct 1389 TCCGTCAGGTTCGCCCAGTCCTTCAGGTCGTGCGCC-AGGTCCAGCTCCTCGGCCGTCCA 1331
Query 796320 AAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT--TGGTAGCGGATGGGGAAC 796377
|| |||||||| ||||| |||||||||| ||| | ||| || | |||| ||||||
Sbjct 1330 GAACGAGGCCTCCGCCTTCTTGTACATCTGCCACA--CGTCGTGCTCCTGGATCGGGAAC 1273
Query 796378 AGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415
|| || || || || ||||||||| || | ||||||
Sbjct 1272 AGCACGAACCGGTTCGGGTTCTCGACCAGGAACGGCTC 1235
>seq982
Length=19217
Score = 199 bits (220), Expect = 6e-45
Identities = 373/540 (69%), Gaps = 6/540 (1%)
Strand=Plus/Plus
Query 118548 AACTCTTGGCGCGCCACGGGGTCG-TCGCGAATGTCGCCCAGGAGGACGCGCGTGACCGT 118606
||||| ||||| | |||||| || ||| | |||| || | | || |||||| ||
Sbjct 9192 AACTCGCTGCGCGTCCTCGGGTCGCTCTTGAA-GACGCCGAGCACGCTGCTCGTGACGGT 9250
Query 118607 GTTTGACCCGTTCTTGCGCACGCCGCGCATGCACACGCACATGTGGAGGCCCTCGAGCAC 118666
| | | ||| |||| |||||||||||| || ||||||||| | |||| | ||
Sbjct 9251 GCTGGCGCCGCTCTTCTCGACGCCGCGCATGACCATGCACATGTGCGTGGCCTCAATGAC 9310
Query 118667 GACGCCGACGCCGCGCGCGCCCG-TGACCTCGCTGATGCTCTCGGCGATCTGGCGCGTGA 118725
||| | ||||| | | || | |||| | ||||| | ||||||||| ||||
Sbjct 9311 CACGGCCACGCC-CTTGGGCTCAATGACGCCCATGATGGCGTTGGCGATCTGCTTGGTGA 9369
Query 118726 GCGCCTCCTGCACCTGGAAGCGGTCCGAGAGCATGTCGACGATGCGCGGGATCTTGCTCA 118785
| |||||||||||| | |||| ||||| | ||| || ||||| || |||||| |
Sbjct 9370 GTCGCTCCTGCACCTGCAGGCGGCGCGAGAAGACCTCGCTGACGCGCGCGAGCTTGCTGA 9429
Query 118786 GGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCA 118845
| |||| | | |||| || | |||||| | |||| ||||||| | || |||| ||
Sbjct 9430 GCCCGAGCACCTTGCCGTTCGGGATGTAGCCGATGTGCACCTTGCCCGTGAACGGCACCA 9489
Query 118846 GATGGTGCTCGCACATGGAGAAAAAGTCAATGTCGCGCACGGTCACCATCTCGCCCGACG 118905
|||||||||||||||||| | | ||| |||||||||||| | ||||||||| || |
Sbjct 9490 TGTGGTGCTCGCACATGGAGTACAGGTCGATGTCGCGCACGATGACCATCTCG-TCGTGG 9548
Query 118906 T-CTCGGCAAAGAGGGCGTCGCCGACGGCCTCGGCCAGGGTCAGGCGGTGGCCGCGCGTG 118964
| ||| | || | ||| ||| | | ||||||||| || ||| || ||| |||
Sbjct 9549 TCCTCCTCGAACACGGCCTCGTTCAGCACGTCGGCCAGGCTCTGGCCGTAGCCCTTGGTG 9608
Query 118965 CGCTCCACCATGGCCTTGGCCACGCGCATGGGCGTGTCCAAGAGGCCCTCGCGCGCCACG 119024
| || || |||||||||| |||||||||||| | || || ||||| ||||| |
Sbjct 9609 TTGTACAGCAGCGCCTTGGCCATGCGCATGGGCGTCTTCACCAGCCCCTCACGCGCAGGG 9668
Query 119025 TCCTCGCCCAGACAGACCAGCATGGTCCTCGTGGCGTCGGCCATGCGCGCCATCTTGGCC 119084
|||||||| | || | |||| ||| || ||| | ||||| | || |||||||
Sbjct 9669 TCCTCGCCGATGCACTCGAGCAGCGTCGTCACGGCCGCCGCCATCTTCTGCAGCTTGGCC 9728
>seq584
Length=26749
Score = 196 bits (216), Expect = 8e-44
Identities = 240/327 (73%), Gaps = 3/327 (1%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| ||||| || ||||||| ||||| |||| ||||| ||||||||||||||||||
Sbjct 11306 CCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCATGAGGCCGCGCTTC 11365
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| ||||| | ||||| ||||||||| ||||||||||| |||| || ||
Sbjct 11366 TTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACGGTTGCGAAC 11425
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
| | | ||||| | | | || | | || | |||||| | ||||||
Sbjct 11426 GCCAGCACGCGCTCCGGGTACGACGACACTCGCGG---GTCGCACCACTTGAGCGCCCAG 11482
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580
| || || ||| |||| | || | ||| |||||||| || | ||||||||||||||
Sbjct 11483 TGCGCTTTCTTCTTCACACACGGAATCGTATCGATGGCACGCAGCAGGTGGTCCTTCTCC 11542
Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640
|| ||||||| ||| ||||| ||||| ||||| || ||| ||||||||||| |||
Sbjct 11543 GTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACACCTCCGAGTGGATGTTCTCG 11602
Query 794641 ATGGCGATCTGGAAGCCATAAAAGCAG 794667
|||||||||||||| || || ||||||
Sbjct 11603 ATGGCGATCTGGAAACCGTAGAAGCAG 11629
Score = 165 bits (182), Expect = 1e-34
Identities = 206/278 (74%), Gaps = 6/278 (2%)
Strand=Plus/Plus
Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200
|| || | |||||| || || || || || || ||||| |||||||||||| |
Sbjct 11624 AAGCAGCGGGCCTCCGGCACCTGCACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTC 11683
Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260
||||||||||||||||| ||||| ||||| || ||||||||||| ||| ||||||| |
Sbjct 11684 ACGATGCCGTCGCTGGCAGCGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTG 11743
Query 796261 TCGCTGAGCGAGACCCAGTGGACCGTGTCG-GCGCCGAGGTCGACCTCCTCGGCGGTCCA 796319
|| | || |||||| | |||| ||||| ||||| | ||||||||| |||||
Sbjct 11744 TCCGTCAGGTTCGCCCAGTCCTTCAGGTCGTGCGCC-AGGTCCAGCTCCTCGGCCGTCCA 11802
Query 796320 AAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT--TGGTAGCGGATGGGGAAC 796377
|| |||||||| ||||| |||||||||| ||| | ||| || | |||| ||||||
Sbjct 11803 GAACGAGGCCTCCGCCTTCTTGTACATCTGCCACA--CGTCGTGCTCCTGGATCGGGAAC 11860
Query 796378 AGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415
|| || || || || ||||||||| || | ||||||
Sbjct 11861 AGCACGAACCGGTTCGGGTTCTCGACCAGGAACGGCTC 11898
Score = 100 bits (110), Expect = 5e-15
Identities = 149/205 (73%), Gaps = 11/205 (5%)
Strand=Plus/Plus
Query 794004 CACCCGAGCGACGCA-AGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGC 794062
||||| ||||| ||| ||||| |||||||| ||||| || ||||| ||||||||||| |
Sbjct 11097 CACCC-AGCGA-GCACAGCAGACGGTCGGCCACGAACTCGATGTATTGGCACATGAGCCC 11154
Query 794063 GGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTC 794122
| |||||||||||| ||| |||| || ||||| || | || ||||| | |||||||
Sbjct 11155 CGAGTTCATGCCGATCAGCTCCACAGGGAGCGAGTCACGCACGAACTCGTGCTCGATCGT 11214
Query 794123 GACGGCCTCGATGATGATCTGCCTGGGCACGTCGG----ACGACGGCTTGTCGACGAGCA 794178
|| || ||| | ||||| | ||||| ||| || | |||||| || |||
Sbjct 11215 CACCGCGTCGCGCACGATCT---CGTGCACG-CGGCTCTCCGGCAGCTTGTTCACCAGCT 11270
Query 794179 TCGTGTAGAGCAGGCAGGCAAAGTC 794203
| | ||| | ||||| || |||||
Sbjct 11271 TGGAGTACATGAGGCACGCGAAGTC 11295
Score = 93.3 bits (102), Expect = 7e-13
Identities = 72/86 (84%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 793896 CCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAG 793955
|| || |||| |||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 6561 CCGGCATTGGAGTACTCGCCCACGCGTTTCTCGAAAAAGTTGGTCTTGCCCTACAGCGAG 6620
Query 793956 ATCAACTCCATCCACGGGAACGGGTT 793981
|||| |||||||| |||||||||
Sbjct 6621 ATCATGTCCATCCAATCGAACGGGTT 6646
>seq994
Length=19108
Score = 183 bits (202), Expect = 5e-40
Identities = 196/259 (76%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||| |||||||| || ||||| || ||||||||| |||| || || || | |
Sbjct 818 TGAACTTGGTCACGGCCTTCGTGCCCTCGGACACGGCGTGCTTGGCGAGCTCACCCGGGA 877
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| || |||||||||||||||||||||||| || || ||| |||||| |
Sbjct 878 GCATAAGACGCACGGCGGTCTGGATCTCGCGGCTGGAGAGCGTCGACTTCTTGTTGTAAC 937
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||| ||| ||||||||| | | ||||||| |||| |||||||||| ||||||||||
Sbjct 938 GCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGATGTCGTTGATGAACGAGTTCA 997
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||||||||| ||| ||||||| ||||||||||||||| ||||||||||
Sbjct 998 TGATCGACATGCCGCGCTTGCTGATGCCCGTGTCGGGGTGCACCTGACGCAGCACCTTGT 1057
Query 1485710 AAACAAAGGACGAGTACGA 1485728
| | ||| |||||||||
Sbjct 1058 AGATGTAGGTCGAGTACGA 1076
>seq12
Length=93368
Score = 179 bits (198), Expect = 6e-39
Identities = 195/259 (75%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||| |||||||| || ||||| || ||||||||| |||| || || || | |
Sbjct 92404 TGAACTTGGTCACGGCCTTCGTGCCCTCCGACACGGCGTGCTTGGCGAGCTCACCCGGGA 92345
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| || |||||||| ||||||||||||||| || || ||| |||||| |
Sbjct 92344 GCATGAGACGCACGGCCGTCTGGATCTCGCGGCTGGAGAGCGTCGACTTCTTGTTGTAAC 92285
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||| ||| ||||||||| | | ||||||| |||| |||||||||| ||||||||||
Sbjct 92284 GCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGATGTCGTTGATGAACGAGTTCA 92225
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||||||||| ||| ||||||| ||||||||||||||| ||||||||||
Sbjct 92224 TGATCGACATGCCGCGCTTGCTGATGCCCGTGTCGGGGTGCACCTGACGCAGCACCTTGT 92165
Query 1485710 AAACAAAGGACGAGTACGA 1485728
| | ||| |||||||||
Sbjct 92164 AGATGTAGGTCGAGTACGA 92146
>seq1023
Length=18726
Score = 159 bits (176), Expect = 5e-33
Identities = 342/505 (68%), Gaps = 22/505 (4%)
Strand=Plus/Plus
Query 2069253 GTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGT 2069312
||| ||||| |||| |||||||| ||| || || ||||| ||||||||||||||
Sbjct 2165 GTCCACGGTGAACTTGATGGCGTCGGCTTTCGGGCGTCCGCGCATGTAGTACATGCCGGT 2224
Query 2069313 CTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCAT--TCGGG 2069370
|||||| || ||| |||||| |||||||||||||| | | || |||||
Sbjct 2225 CTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACGTGA--GCTTGCTGATGGTCGGG 2282
Query 2069371 ACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCC 2069430
|||| || || |||||||||||| |||||| | || | |||||||||||| |
Sbjct 2283 TCGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAATGTACGCACCGCGGTCGGCCGAC 2342
Query 2069431 ATGTCGATGGTCACGC-----GGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGA 2069485
| ||| | | ||| | ||| | ||||||||| |||||| || ||||||
Sbjct 2343 AGGTCCA--GCACCGCCTTCTGCTTG---ATCTCCCACACCGTCTTGTACTTCTCCTTGA 2397
Query 2069486 GATGCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCC-CTGCGCTGCGATGAGG 2069544
|| ||| | | | | | | | |||||| ||||| ||| | | | ||
Sbjct 2398 CGTGGTCCGGGATCGCCTTGACGTT------CTGCACGGAGCCGCTGTCGTTCAA-GATC 2450
Query 2069545 CGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGG 2069604
||| ||| | ||| |||||||| | |||| || | |||| || | ||||| |
Sbjct 2451 TGGTTGCGCACGTCCGGCGTCCAGATGCCGAGCTCGATCAGCTCCTTCATCAGGTACTTG 2510
Query 2069605 TTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACC 2069664
||||| | || || || || | ||||| ||||| |||| |||||| |||| |
Sbjct 2511 TTGACGATCGTGAACTCTCCAGCCAGCACTCGGCGGTTGTACATGTTGGACGTGTACGGC 2570
Query 2069665 TCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACG 2069724
||| | |||| |||| || |||||||| | ||| | ||||| |||||| | |||||
Sbjct 2571 TCGATAGACTCGTTGTTTCCAAGGATCTGGGCCGTGGAAGCCGTCGGCATGGGGGCCACC 2630
Query 2069725 AGCAGCGAGTTGCGCAGGCCGTACT 2069749
|||||||||||||| || |||| ||
Sbjct 2631 AGCAGCGAGTTGCGGAGTCCGTGCT 2655
Score = 136 bits (150), Expect = 6e-26
Identities = 212/303 (70%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596
|| |||||| || || ||||| ||||||||||| || || |||||||| | | ||| ||
Sbjct 3557 GCCCTGGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATT 3616
Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656
|||| |||||| ||||| | |||| | | ||| || | |||||| |
Sbjct 3617 GGACGAGCCGTTCGTGCCTCGGATGTAGCTGTTGGTGGCTCGGATGTTGTGCATACTGAT 3676
Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716
||| || || |||||| || ||||| || || | || | ||| ||||| |||||
Sbjct 3677 GCCAATACCTCCGGCCCATTTAGAGATACAGGCACATTGCTTTAACGTGTCGTAAATGCC 3736
Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776
|| || |||||| | | |||| |||| || ||||| ||||| ||| ||||||| |||
Sbjct 3737 TTCAATTGAGTCGTCTTGCATGGCCAATAGGAAGCAAGACGACAGTTGTGGGCGCGGCGT 3796
Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836
|||||| || || || || || || || |||| | || ||| |||||| ||||||
Sbjct 3797 GCCGGCGTTAAAAAGTGTCGGGGTGGCATGCGTGAAAAACATTTGCGACATGAGCTCGTA 3856
Query 2073837 GGT 2073839
||
Sbjct 3857 CGT 3859
Score = 134 bits (148), Expect = 2e-25
Identities = 269/403 (67%), Gaps = 4/403 (1%)
Strand=Plus/Plus
Query 2071612 GTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGC 2071671
||||| |||||||||||||| | ||||| | |||||||||| || ||| |||||
Sbjct 3159 GTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGTACAACATAAAGGGC 3218
Query 2071672 GCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAG 2071731
| |||||||||||||| || | ||||| |||| | || | ||| | ||
Sbjct 3219 ACTCCCGTCTCGATCTGGGCGTCCAATATGGCGAACCACAGCTGCTGGGCGTTGATCGTC 3278
Query 2071732 GTCCTCGCGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGG 2071791
| | ||||| |||| ||||||| || || || |||| |
Sbjct 3279 TTGCGGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCCTCGAATTCGTCGCCCCAG 3338
Query 2071792 CACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACC 2071851
||||| | || || || |||||| ||||||||||| ||| | ||| | ||
Sbjct 3339 CACTCATAGAGTCCAGGGGCCTCGTTAGGGCAAAAGAGACTCCACTTGCCATTGGCTTCC 3398
Query 2071852 ACGCGGCGCATAAACAGGTC--GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGT 2071909
|| | ||| ||||| || |||| ||| ||| |||| || || ||||| || ||||
Sbjct 3399 ACCCTCTTCATGAACAGATCAGGCAC--CCAAAGGGCGTAGAACAGGTCGCGAGCGCGGT 3456
Query 2071910 TCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACG 2071969
| ||| |||||||||||||| ||||| | | |||| | || |||||||| |
Sbjct 3457 GCAACTCGTTGCCGTGGTTCTTACGGAGGTCCAAGAACTCGAACACATCTGCGTGCCAAG 3516
Query 2071970 GCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012
|||||| ||| ||| |||| |||||| |||||||| |||||
Sbjct 3517 GCTCCAAATAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCC 3559
>seq198
Length=42308
Score = 100 bits (110), Expect = 5e-15
Identities = 81/98 (83%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 1703804 GCCATGGATGGCGCCGCCGCTTACGACCACCTCGACGTCGTCAAGTGGCTCCACGAGAAT 1703863
||||||||||||||||| || ||| ||||||||| || ||||||||||| ||| | |||
Sbjct 2470 GCCATGGATGGCGCCGCGACTAACGGCCACCTCGAAGTTGTCAAGTGGCTGCACAATAAT 2529
Query 1703864 CGCACCGAGGGATGCGCGACTGCCGCCATGGATAGCGC 1703901
||| | || || ||| | |||||||| |||||| ||||
Sbjct 2530 CGCTCTGAAGGCTGCACCACTGCCGCTATGGATGGCGC 2567
>seq419
Length=31576
Score = 95.1 bits (104), Expect = 2e-13
Identities = 164/232 (71%), Gaps = 16/232 (7%)
Strand=Plus/Minus
Query 1249580 TATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGCAGCAAC---CTG 1249636
|| |||||| ||||||||||||| || | |||||||| |||||| || ||| |||
Sbjct 3873 TACCTGCACTCGCTCGACCCGCCGGTGCTGCACCGCGACCTCAAGTCCAAGAACATCCTG 3814
Query 1249637 CTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGG--TCTCGCGCGCATCCGCG 1249694
||| | |||| | | | |||| | | |||||||| |||| || | | ||||
Sbjct 3813 CTGACCTCCGACCTGGAA---GCCAAGCTCACGGACTTTGGCATCTCTCGAGAA--CGCG 3759
Query 1249695 AGGACAATGCCACCATGACGC--GGTG-CGGCACGCCGGCGTGGACGGCGCCCGAGGTCA 1249751
||||| ||||||||| || | ||||||| || |||| ||| ||||||||||
Sbjct 3758 TCGACAAG---ACCATGACGGCTGGCGTCGGCACGTCGCTCTGGATGGCTCCCGAGGTCA 3702
Query 1249752 TCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCATCGT 1249803
| |||||| | |||||||| |||||| ||| |||| ||||| ||||
Sbjct 3701 TGATGGGCGAGAGGTACGACGACAAGGCCGACATCTTCTCGTTCGGCGTCGT 3650
>seq3551
Length=5782
Score = 91.5 bits (100), Expect = 2e-12
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 1703795 ACAACGGATGCCATGGATGGCGCCGCCGCTTACGACCACCTCGACGTCGTCAAGTGGCTC 1703854
||| | | ||| |||||||| || || || ||| || |||||||| ||| ||||||||
Sbjct 4561 ACAGCTGCTGCTATGGATGGAGCGGCAGCGAACGGGCATCTCGACGTTGTCCAGTGGCTC 4620
Query 1703855 CACGAGAATCGCACCGAGGGATGCGCGACTGCCGCCATGGATAGCGCCGC 1703904
||||| || ||||| || || ||| ||||| | ||||||||| |||| ||
Sbjct 4621 CACGATAACCGCACAGAAGGCTGCACGACTACTGCCATGGATCGCGCTGC 4670
>seq246
Length=39142
Score = 91.5 bits (100), Expect = 2e-12
Identities = 96/126 (76%), Gaps = 3/126 (2%)
Strand=Plus/Minus
Query 1217491 CGACGATGACCCGGTGC---GGCACGCCGGCGTGGACGGCGCCCGAGATCCTGCGCGGCG 1217547
||||||||||| | || |||||| |||||||| || || ||| | |||||||| |
Sbjct 36638 CGACGATGACCGCGGGCATCGGCACGATGGCGTGGATCGCTCCGGAGGTGCTGCGCGGTG 36579
Query 1217548 AGCGCTACTCGGAAAAGGCCGACATCTACTCTTTCGGCATCGTCATGTGGGAGATCATCA 1217607
|||| ||| |||| | ||||||||||||||| |||||| | || ||| |||| | ||
Sbjct 36578 AGCGGTACACGGAGATGGCCGACATCTACTCGTTCGGCGTGATCCTGTCGGAGCTGGCCA 36519
Query 1217608 CGCGCA 1217613
|| |||
Sbjct 36518 CGTGCA 36513
>seq123
Length=49723
Score = 89.7 bits (98), Expect = 8e-12
Identities = 167/234 (71%), Gaps = 20/234 (9%)
Strand=Plus/Plus
Query 1249580 TATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAG---AGCAGCAACCTG 1249636
||||||||| | |||||||| || | ||||| || |||||| | | || ||||
Sbjct 33437 TATCTGCACTCCCTCGACCCCGTTGTACTACACCGAGACCTCAAGTCGATGAACATCCTG 33496
Query 1249637 CTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGG--TCTCGCGCGCATCCGCG 1249694
||| ||| | ||| | | | || | |||||||||| |||||||| || |
Sbjct 33497 CTG-TCGTC--CGACTGGGACGCGAAACTCACCGACTTTGGCGTCTCGCGC-CA-----G 33547
Query 1249695 AGGACAATGC-CACCATGACG--CGGTG-CGGCACGCCGGCG-TGGACGGCGCCCGAGGT 1249749
|||| || ||| |||||| ||| | |||||| | |||| |||| ||||||||||||
Sbjct 33548 TGGACCGTGGACACGATGACGGCCGGCGTCGGCAC-CAGGCGGTGGATGGCGCCCGAGGT 33606
Query 1249750 CATCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCATCGT 1249803
||| ||| ||||||||||| | |||||||| ||| |||| ||||| ||||
Sbjct 33607 CATGATGGGCAAGCGCTACGACACGAGCGCCGACATCTTCTCGTTCGGCGTCGT 33660
>seq1696
Length=12083
Score = 86.0 bits (94), Expect = 1e-10
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
||||| ||| | ||||| |||||||||||| | ||||||||| | || || || || |
Sbjct 4844 CTCTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAGTCGCTGCTGGACCTGTCG 4785
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
||| | ||||| | | |||||||||||| |||||||||| |||||| || |||
Sbjct 4784 TGCGCCAAGGTGGCGTGCATGATCAAGGGCAAGACGCCCGAGGAGATCCGCGCCACGTTT 4725
Query 2035749 AACATCA 2035755
|||||
Sbjct 4724 GGCATCA 4718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915242862391526
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |