Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2029 268 1e-65 seq7744 205 1e-46 seq982 199 6e-45 seq584 196 8e-44 seq994 183 5e-40 seq12 179 6e-39 seq1023 159 5e-33 seq198 100 5e-15 seq419 95.1 2e-13 seq3551 91.5 2e-12 seq246 91.5 2e-12 seq123 89.7 8e-12 seq1696 86.0 1e-10 >seq2029 Length=11293 Score = 268 bits (296), Expect = 1e-65 Identities = 354/483 (73%), Gaps = 10/483 (2%) Strand=Plus/Plus Query 2018916 CCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCC 2018975 |||||| | || |||||||| ||| ||||| | ||| | ||||||||| || | Sbjct 6339 CCGTGGGTGGAGAAGTACCGGCCGCGCGTGCTGGCGGACGTGGTGGGCAACCGCGACACG 6398 Query 2018976 GTTGCCTACCTCAAGGCGCTGGCCGCCGACGG-CAACATGCCCAACCTCTTGCTGGCGGG 2019034 || || || |||| |||| || | ||| ||||||| | ||||| | ||| |||| Sbjct 6399 GTGGCGAGTCTGCAGGCCATGGC-GCAGGCGGGCAACATGACGAACCTGATCCTGTCGGG 6457 Query 2019035 CCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGC 2019094 |||||| ||||||||||||||||||||||| ||| |||||||||| ||| |||||| Sbjct 6458 CCCGCCGGGCACGGGCAAGACCACGAGCATTTTGTGTCTGGCGCGCGAGCTGCTGGGCG- 6516 Query 2019095 GGCCGCC-GACG-AGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTC 2019152 || || || | |||| ||||| || ||||| ||||| ||||| |||||| | ||| Sbjct 6517 -GCAGCATGAAGCAGGCGGTGCTGGAGCTCAACGCGTCGGACGACCGCGGCATCGACACG 6575 Query 2019153 GTGCGTAGAATCATCAAGCA--TCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCC 2019210 ||||| || | |||||| || ||| | || | || || || || ||||||| Sbjct 6576 GTGCGCAGTAAGATCAAGATGTTCGCGCAGCAGAAGGTGACG--CTACCCCCGGGCCGCC 6633 Query 2019211 ACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCC 2019270 ||||| | | ||||| || |||||||||| | | ||||| |||||||||||||| || | Sbjct 6634 ACAAGATCGTGATCCTGGACGAGGCCGACTCCATGACGTCCGCGGCCCAGCAGGCGCTGC 6693 Query 2019271 GATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGT 2019330 | |||||||| | | | | ||| ||||| || |||||||||||||||| ||| Sbjct 6694 GCCGCACCATGGAGATCTTCTCGGCCACCACGCGCTTCGCGCTGGCCTGCAACAACTCGA 6753 Query 2019331 CGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCG 2019390 | | | |||| ||| || |||||||||| ||||||||| |||||| |||| || ||| Sbjct 6754 CCAAGATCATTGAACCCATCCAGAGCCGCTGCGCCATCCTGCGCTACACGCGGCTGCCCG 6813 Query 2019391 ACG 2019393 ||| Sbjct 6814 ACG 6816 >seq7744 Length=2697 Score = 205 bits (226), Expect = 1e-46 Identities = 242/327 (74%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || ||||||| ||||| |||| ||||| |||||||||||||||||| Sbjct 1827 CCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCATGAGGCCGCGCTTC 1768 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| ||||| ||||||||| ||||||||||| || || || || Sbjct 1767 TTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACAGCTGCGAAC 1708 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | | || ||||| | | | || | | || | |||||| | |||||| Sbjct 1707 GCCAGCAGACGCTCCGGGTACGACGACACTCGCGG---GTCGCACCACTTGAGCGCCCAG 1651 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | || || ||| |||| | || | ||| |||||||| || | |||||||||||||| Sbjct 1650 TGCGCTTTCTTCTTCACACACGGGATCGTATCGATGGCACGCAGCAGGTGGTCCTTCTCC 1591 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | ||||||| ||| ||||| ||||| ||||| || ||||||||||||||| ||| Sbjct 1590 GTTGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACACCTCTGAGTGGATGTTCTCG 1531 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||||||||||||| || || |||||| Sbjct 1530 ATGGCGATCTGGAAACCGTAGAAGCAG 1504 Score = 167 bits (184), Expect = 4e-35 Identities = 174/224 (78%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || || ||||| | ||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 2276 ACACCGGCCTTCGAGTACTCGCCCACGCGCTTCTCGAAAAAGTTGGTCTTGCCCTGCAGC 2217 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGT-GCTTCTCG-CAC-CCG 794009 ||||||| |||||||| ||||||||| | | | || || | | ||| ||| || Sbjct 2216 GAGATCATGTCCATCCAGTCGAACGGGTT---CTTTACGTTGTAGATCTTCGACACACCC 2160 Query 794010 AGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069 ||||| ||||| |||||||| ||||| || ||||||||||||||||| | | |||| Sbjct 2159 AGCGAGTACAGCAGACGGTCGGCCACGAACTCGATGTACTGGCACATGAGCCCCGAGTTC 2100 Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTT 794113 |||||||| ||| |||| || ||||| || | || ||||| || Sbjct 2099 ATGCCGATCAGCTCCACAGGGAGCGAGTCACGCACGAACTCGTT 2056 Score = 165 bits (182), Expect = 1e-34 Identities = 206/278 (74%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | |||||| || || || || || || ||||| |||||||||||| | Sbjct 1509 AAGCAGCGGGCCTCCGGCACCTGCACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTC 1450 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||||||||||||||| ||||| ||||| || ||||||||||| ||| ||||||| | Sbjct 1449 ACGATGCCGTCGCTGGCAGCGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTG 1390 Query 796261 TCGCTGAGCGAGACCCAGTGGACCGTGTCG-GCGCCGAGGTCGACCTCCTCGGCGGTCCA 796319 || | || |||||| | |||| ||||| ||||| | ||||||||| ||||| Sbjct 1389 TCCGTCAGGTTCGCCCAGTCCTTCAGGTCGTGCGCC-AGGTCCAGCTCCTCGGCCGTCCA 1331 Query 796320 AAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT--TGGTAGCGGATGGGGAAC 796377 || |||||||| ||||| |||||||||| ||| | ||| || | |||| |||||| Sbjct 1330 GAACGAGGCCTCCGCCTTCTTGTACATCTGCCACA--CGTCGTGCTCCTGGATCGGGAAC 1273 Query 796378 AGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || || || || || ||||||||| || | |||||| Sbjct 1272 AGCACGAACCGGTTCGGGTTCTCGACCAGGAACGGCTC 1235 >seq982 Length=19217 Score = 199 bits (220), Expect = 6e-45 Identities = 373/540 (69%), Gaps = 6/540 (1%) Strand=Plus/Plus Query 118548 AACTCTTGGCGCGCCACGGGGTCG-TCGCGAATGTCGCCCAGGAGGACGCGCGTGACCGT 118606 ||||| ||||| | |||||| || ||| | |||| || | | || |||||| || Sbjct 9192 AACTCGCTGCGCGTCCTCGGGTCGCTCTTGAA-GACGCCGAGCACGCTGCTCGTGACGGT 9250 Query 118607 GTTTGACCCGTTCTTGCGCACGCCGCGCATGCACACGCACATGTGGAGGCCCTCGAGCAC 118666 | | | ||| |||| |||||||||||| || ||||||||| | |||| | || Sbjct 9251 GCTGGCGCCGCTCTTCTCGACGCCGCGCATGACCATGCACATGTGCGTGGCCTCAATGAC 9310 Query 118667 GACGCCGACGCCGCGCGCGCCCG-TGACCTCGCTGATGCTCTCGGCGATCTGGCGCGTGA 118725 ||| | ||||| | | || | |||| | ||||| | ||||||||| |||| Sbjct 9311 CACGGCCACGCC-CTTGGGCTCAATGACGCCCATGATGGCGTTGGCGATCTGCTTGGTGA 9369 Query 118726 GCGCCTCCTGCACCTGGAAGCGGTCCGAGAGCATGTCGACGATGCGCGGGATCTTGCTCA 118785 | |||||||||||| | |||| ||||| | ||| || ||||| || |||||| | Sbjct 9370 GTCGCTCCTGCACCTGCAGGCGGCGCGAGAAGACCTCGCTGACGCGCGCGAGCTTGCTGA 9429 Query 118786 GGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCA 118845 | |||| | | |||| || | |||||| | |||| ||||||| | || |||| || Sbjct 9430 GCCCGAGCACCTTGCCGTTCGGGATGTAGCCGATGTGCACCTTGCCCGTGAACGGCACCA 9489 Query 118846 GATGGTGCTCGCACATGGAGAAAAAGTCAATGTCGCGCACGGTCACCATCTCGCCCGACG 118905 |||||||||||||||||| | | ||| |||||||||||| | ||||||||| || | Sbjct 9490 TGTGGTGCTCGCACATGGAGTACAGGTCGATGTCGCGCACGATGACCATCTCG-TCGTGG 9548 Query 118906 T-CTCGGCAAAGAGGGCGTCGCCGACGGCCTCGGCCAGGGTCAGGCGGTGGCCGCGCGTG 118964 | ||| | || | ||| ||| | | ||||||||| || ||| || ||| ||| Sbjct 9549 TCCTCCTCGAACACGGCCTCGTTCAGCACGTCGGCCAGGCTCTGGCCGTAGCCCTTGGTG 9608 Query 118965 CGCTCCACCATGGCCTTGGCCACGCGCATGGGCGTGTCCAAGAGGCCCTCGCGCGCCACG 119024 | || || |||||||||| |||||||||||| | || || ||||| ||||| | Sbjct 9609 TTGTACAGCAGCGCCTTGGCCATGCGCATGGGCGTCTTCACCAGCCCCTCACGCGCAGGG 9668 Query 119025 TCCTCGCCCAGACAGACCAGCATGGTCCTCGTGGCGTCGGCCATGCGCGCCATCTTGGCC 119084 |||||||| | || | |||| ||| || ||| | ||||| | || ||||||| Sbjct 9669 TCCTCGCCGATGCACTCGAGCAGCGTCGTCACGGCCGCCGCCATCTTCTGCAGCTTGGCC 9728 >seq584 Length=26749 Score = 196 bits (216), Expect = 8e-44 Identities = 240/327 (73%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || ||||||| ||||| |||| ||||| |||||||||||||||||| Sbjct 11306 CCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCATGAGGCCGCGCTTC 11365 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||| | ||||| ||||||||| ||||||||||| |||| || || Sbjct 11366 TTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACGGTTGCGAAC 11425 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | | | ||||| | | | || | | || | |||||| | |||||| Sbjct 11426 GCCAGCACGCGCTCCGGGTACGACGACACTCGCGG---GTCGCACCACTTGAGCGCCCAG 11482 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | || || ||| |||| | || | ||| |||||||| || | |||||||||||||| Sbjct 11483 TGCGCTTTCTTCTTCACACACGGAATCGTATCGATGGCACGCAGCAGGTGGTCCTTCTCC 11542 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 || ||||||| ||| ||||| ||||| ||||| || ||| ||||||||||| ||| Sbjct 11543 GTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACACCTCCGAGTGGATGTTCTCG 11602 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||||||||||||| || || |||||| Sbjct 11603 ATGGCGATCTGGAAACCGTAGAAGCAG 11629 Score = 165 bits (182), Expect = 1e-34 Identities = 206/278 (74%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | |||||| || || || || || || ||||| |||||||||||| | Sbjct 11624 AAGCAGCGGGCCTCCGGCACCTGCACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTC 11683 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||||||||||||||| ||||| ||||| || ||||||||||| ||| ||||||| | Sbjct 11684 ACGATGCCGTCGCTGGCAGCGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTG 11743 Query 796261 TCGCTGAGCGAGACCCAGTGGACCGTGTCG-GCGCCGAGGTCGACCTCCTCGGCGGTCCA 796319 || | || |||||| | |||| ||||| ||||| | ||||||||| ||||| Sbjct 11744 TCCGTCAGGTTCGCCCAGTCCTTCAGGTCGTGCGCC-AGGTCCAGCTCCTCGGCCGTCCA 11802 Query 796320 AAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT--TGGTAGCGGATGGGGAAC 796377 || |||||||| ||||| |||||||||| ||| | ||| || | |||| |||||| Sbjct 11803 GAACGAGGCCTCCGCCTTCTTGTACATCTGCCACA--CGTCGTGCTCCTGGATCGGGAAC 11860 Query 796378 AGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || || || || || ||||||||| || | |||||| Sbjct 11861 AGCACGAACCGGTTCGGGTTCTCGACCAGGAACGGCTC 11898 Score = 100 bits (110), Expect = 5e-15 Identities = 149/205 (73%), Gaps = 11/205 (5%) Strand=Plus/Plus Query 794004 CACCCGAGCGACGCA-AGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGC 794062 ||||| ||||| ||| ||||| |||||||| ||||| || ||||| ||||||||||| | Sbjct 11097 CACCC-AGCGA-GCACAGCAGACGGTCGGCCACGAACTCGATGTATTGGCACATGAGCCC 11154 Query 794063 GGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTC 794122 | |||||||||||| ||| |||| || ||||| || | || ||||| | ||||||| Sbjct 11155 CGAGTTCATGCCGATCAGCTCCACAGGGAGCGAGTCACGCACGAACTCGTGCTCGATCGT 11214 Query 794123 GACGGCCTCGATGATGATCTGCCTGGGCACGTCGG----ACGACGGCTTGTCGACGAGCA 794178 || || ||| | ||||| | ||||| ||| || | |||||| || ||| Sbjct 11215 CACCGCGTCGCGCACGATCT---CGTGCACG-CGGCTCTCCGGCAGCTTGTTCACCAGCT 11270 Query 794179 TCGTGTAGAGCAGGCAGGCAAAGTC 794203 | | ||| | ||||| || ||||| Sbjct 11271 TGGAGTACATGAGGCACGCGAAGTC 11295 Score = 93.3 bits (102), Expect = 7e-13 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 793896 CCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAG 793955 || || |||| |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 6561 CCGGCATTGGAGTACTCGCCCACGCGTTTCTCGAAAAAGTTGGTCTTGCCCTACAGCGAG 6620 Query 793956 ATCAACTCCATCCACGGGAACGGGTT 793981 |||| |||||||| ||||||||| Sbjct 6621 ATCATGTCCATCCAATCGAACGGGTT 6646 >seq994 Length=19108 Score = 183 bits (202), Expect = 5e-40 Identities = 196/259 (76%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| |||||||| || ||||| || ||||||||| |||| || || || | | Sbjct 818 TGAACTTGGTCACGGCCTTCGTGCCCTCGGACACGGCGTGCTTGGCGAGCTCACCCGGGA 877 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || |||||||||||||||||||||||| || || ||| |||||| | Sbjct 878 GCATAAGACGCACGGCGGTCTGGATCTCGCGGCTGGAGAGCGTCGACTTCTTGTTGTAAC 937 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||| ||| ||||||||| | | ||||||| |||| |||||||||| |||||||||| Sbjct 938 GCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGATGTCGTTGATGAACGAGTTCA 997 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||| ||| ||||||| ||||||||||||||| |||||||||| Sbjct 998 TGATCGACATGCCGCGCTTGCTGATGCCCGTGTCGGGGTGCACCTGACGCAGCACCTTGT 1057 Query 1485710 AAACAAAGGACGAGTACGA 1485728 | | ||| ||||||||| Sbjct 1058 AGATGTAGGTCGAGTACGA 1076 >seq12 Length=93368 Score = 179 bits (198), Expect = 6e-39 Identities = 195/259 (75%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| |||||||| || ||||| || ||||||||| |||| || || || | | Sbjct 92404 TGAACTTGGTCACGGCCTTCGTGCCCTCCGACACGGCGTGCTTGGCGAGCTCACCCGGGA 92345 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || |||||||| ||||||||||||||| || || ||| |||||| | Sbjct 92344 GCATGAGACGCACGGCCGTCTGGATCTCGCGGCTGGAGAGCGTCGACTTCTTGTTGTAAC 92285 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||| ||| ||||||||| | | ||||||| |||| |||||||||| |||||||||| Sbjct 92284 GCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGATGTCGTTGATGAACGAGTTCA 92225 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||| ||| ||||||| ||||||||||||||| |||||||||| Sbjct 92224 TGATCGACATGCCGCGCTTGCTGATGCCCGTGTCGGGGTGCACCTGACGCAGCACCTTGT 92165 Query 1485710 AAACAAAGGACGAGTACGA 1485728 | | ||| ||||||||| Sbjct 92164 AGATGTAGGTCGAGTACGA 92146 >seq1023 Length=18726 Score = 159 bits (176), Expect = 5e-33 Identities = 342/505 (68%), Gaps = 22/505 (4%) Strand=Plus/Plus Query 2069253 GTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGT 2069312 ||| ||||| |||| |||||||| ||| || || ||||| |||||||||||||| Sbjct 2165 GTCCACGGTGAACTTGATGGCGTCGGCTTTCGGGCGTCCGCGCATGTAGTACATGCCGGT 2224 Query 2069313 CTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCAT--TCGGG 2069370 |||||| || ||| |||||| |||||||||||||| | | || ||||| Sbjct 2225 CTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACGTGA--GCTTGCTGATGGTCGGG 2282 Query 2069371 ACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCC 2069430 |||| || || |||||||||||| |||||| | || | |||||||||||| | Sbjct 2283 TCGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAATGTACGCACCGCGGTCGGCCGAC 2342 Query 2069431 ATGTCGATGGTCACGC-----GGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGA 2069485 | ||| | | ||| | ||| | ||||||||| |||||| || |||||| Sbjct 2343 AGGTCCA--GCACCGCCTTCTGCTTG---ATCTCCCACACCGTCTTGTACTTCTCCTTGA 2397 Query 2069486 GATGCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCC-CTGCGCTGCGATGAGG 2069544 || ||| | | | | | | | |||||| ||||| ||| | | | || Sbjct 2398 CGTGGTCCGGGATCGCCTTGACGTT------CTGCACGGAGCCGCTGTCGTTCAA-GATC 2450 Query 2069545 CGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGG 2069604 ||| ||| | ||| |||||||| | |||| || | |||| || | ||||| | Sbjct 2451 TGGTTGCGCACGTCCGGCGTCCAGATGCCGAGCTCGATCAGCTCCTTCATCAGGTACTTG 2510 Query 2069605 TTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACC 2069664 ||||| | || || || || | ||||| ||||| |||| |||||| |||| | Sbjct 2511 TTGACGATCGTGAACTCTCCAGCCAGCACTCGGCGGTTGTACATGTTGGACGTGTACGGC 2570 Query 2069665 TCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACG 2069724 ||| | |||| |||| || |||||||| | ||| | ||||| |||||| | ||||| Sbjct 2571 TCGATAGACTCGTTGTTTCCAAGGATCTGGGCCGTGGAAGCCGTCGGCATGGGGGCCACC 2630 Query 2069725 AGCAGCGAGTTGCGCAGGCCGTACT 2069749 |||||||||||||| || |||| || Sbjct 2631 AGCAGCGAGTTGCGGAGTCCGTGCT 2655 Score = 136 bits (150), Expect = 6e-26 Identities = 212/303 (70%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || |||||| || || ||||| ||||||||||| || || |||||||| | | ||| || Sbjct 3557 GCCCTGGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATT 3616 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 |||| |||||| ||||| | |||| | | ||| || | |||||| | Sbjct 3617 GGACGAGCCGTTCGTGCCTCGGATGTAGCTGTTGGTGGCTCGGATGTTGTGCATACTGAT 3676 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 ||| || || |||||| || ||||| || || | || | ||| ||||| ||||| Sbjct 3677 GCCAATACCTCCGGCCCATTTAGAGATACAGGCACATTGCTTTAACGTGTCGTAAATGCC 3736 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 || || |||||| | | |||| |||| || ||||| ||||| ||| ||||||| ||| Sbjct 3737 TTCAATTGAGTCGTCTTGCATGGCCAATAGGAAGCAAGACGACAGTTGTGGGCGCGGCGT 3796 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836 |||||| || || || || || || || |||| | || ||| |||||| |||||| Sbjct 3797 GCCGGCGTTAAAAAGTGTCGGGGTGGCATGCGTGAAAAACATTTGCGACATGAGCTCGTA 3856 Query 2073837 GGT 2073839 || Sbjct 3857 CGT 3859 Score = 134 bits (148), Expect = 2e-25 Identities = 269/403 (67%), Gaps = 4/403 (1%) Strand=Plus/Plus Query 2071612 GTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGC 2071671 ||||| |||||||||||||| | ||||| | |||||||||| || ||| ||||| Sbjct 3159 GTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGTACAACATAAAGGGC 3218 Query 2071672 GCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAG 2071731 | |||||||||||||| || | ||||| |||| | || | ||| | || Sbjct 3219 ACTCCCGTCTCGATCTGGGCGTCCAATATGGCGAACCACAGCTGCTGGGCGTTGATCGTC 3278 Query 2071732 GTCCTCGCGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGG 2071791 | | ||||| |||| ||||||| || || || |||| | Sbjct 3279 TTGCGGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCCTCGAATTCGTCGCCCCAG 3338 Query 2071792 CACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACC 2071851 ||||| | || || || |||||| ||||||||||| ||| | ||| | || Sbjct 3339 CACTCATAGAGTCCAGGGGCCTCGTTAGGGCAAAAGAGACTCCACTTGCCATTGGCTTCC 3398 Query 2071852 ACGCGGCGCATAAACAGGTC--GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGT 2071909 || | ||| ||||| || |||| ||| ||| |||| || || ||||| || |||| Sbjct 3399 ACCCTCTTCATGAACAGATCAGGCAC--CCAAAGGGCGTAGAACAGGTCGCGAGCGCGGT 3456 Query 2071910 TCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACG 2071969 | ||| |||||||||||||| ||||| | | |||| | || |||||||| | Sbjct 3457 GCAACTCGTTGCCGTGGTTCTTACGGAGGTCCAAGAACTCGAACACATCTGCGTGCCAAG 3516 Query 2071970 GCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 |||||| ||| ||| |||| |||||| |||||||| ||||| Sbjct 3517 GCTCCAAATAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCC 3559 >seq198 Length=42308 Score = 100 bits (110), Expect = 5e-15 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 1703804 GCCATGGATGGCGCCGCCGCTTACGACCACCTCGACGTCGTCAAGTGGCTCCACGAGAAT 1703863 ||||||||||||||||| || ||| ||||||||| || ||||||||||| ||| | ||| Sbjct 2470 GCCATGGATGGCGCCGCGACTAACGGCCACCTCGAAGTTGTCAAGTGGCTGCACAATAAT 2529 Query 1703864 CGCACCGAGGGATGCGCGACTGCCGCCATGGATAGCGC 1703901 ||| | || || ||| | |||||||| |||||| |||| Sbjct 2530 CGCTCTGAAGGCTGCACCACTGCCGCTATGGATGGCGC 2567 >seq419 Length=31576 Score = 95.1 bits (104), Expect = 2e-13 Identities = 164/232 (71%), Gaps = 16/232 (7%) Strand=Plus/Minus Query 1249580 TATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGCAGCAAC---CTG 1249636 || |||||| ||||||||||||| || | |||||||| |||||| || ||| ||| Sbjct 3873 TACCTGCACTCGCTCGACCCGCCGGTGCTGCACCGCGACCTCAAGTCCAAGAACATCCTG 3814 Query 1249637 CTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGG--TCTCGCGCGCATCCGCG 1249694 ||| | |||| | | | |||| | | |||||||| |||| || | | |||| Sbjct 3813 CTGACCTCCGACCTGGAA---GCCAAGCTCACGGACTTTGGCATCTCTCGAGAA--CGCG 3759 Query 1249695 AGGACAATGCCACCATGACGC--GGTG-CGGCACGCCGGCGTGGACGGCGCCCGAGGTCA 1249751 ||||| ||||||||| || | ||||||| || |||| ||| |||||||||| Sbjct 3758 TCGACAAG---ACCATGACGGCTGGCGTCGGCACGTCGCTCTGGATGGCTCCCGAGGTCA 3702 Query 1249752 TCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCATCGT 1249803 | |||||| | |||||||| |||||| ||| |||| ||||| |||| Sbjct 3701 TGATGGGCGAGAGGTACGACGACAAGGCCGACATCTTCTCGTTCGGCGTCGT 3650 >seq3551 Length=5782 Score = 91.5 bits (100), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 1703795 ACAACGGATGCCATGGATGGCGCCGCCGCTTACGACCACCTCGACGTCGTCAAGTGGCTC 1703854 ||| | | ||| |||||||| || || || ||| || |||||||| ||| |||||||| Sbjct 4561 ACAGCTGCTGCTATGGATGGAGCGGCAGCGAACGGGCATCTCGACGTTGTCCAGTGGCTC 4620 Query 1703855 CACGAGAATCGCACCGAGGGATGCGCGACTGCCGCCATGGATAGCGCCGC 1703904 ||||| || ||||| || || ||| ||||| | ||||||||| |||| || Sbjct 4621 CACGATAACCGCACAGAAGGCTGCACGACTACTGCCATGGATCGCGCTGC 4670 >seq246 Length=39142 Score = 91.5 bits (100), Expect = 2e-12 Identities = 96/126 (76%), Gaps = 3/126 (2%) Strand=Plus/Minus Query 1217491 CGACGATGACCCGGTGC---GGCACGCCGGCGTGGACGGCGCCCGAGATCCTGCGCGGCG 1217547 ||||||||||| | || |||||| |||||||| || || ||| | |||||||| | Sbjct 36638 CGACGATGACCGCGGGCATCGGCACGATGGCGTGGATCGCTCCGGAGGTGCTGCGCGGTG 36579 Query 1217548 AGCGCTACTCGGAAAAGGCCGACATCTACTCTTTCGGCATCGTCATGTGGGAGATCATCA 1217607 |||| ||| |||| | ||||||||||||||| |||||| | || ||| |||| | || Sbjct 36578 AGCGGTACACGGAGATGGCCGACATCTACTCGTTCGGCGTGATCCTGTCGGAGCTGGCCA 36519 Query 1217608 CGCGCA 1217613 || ||| Sbjct 36518 CGTGCA 36513 >seq123 Length=49723 Score = 89.7 bits (98), Expect = 8e-12 Identities = 167/234 (71%), Gaps = 20/234 (9%) Strand=Plus/Plus Query 1249580 TATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAG---AGCAGCAACCTG 1249636 ||||||||| | |||||||| || | ||||| || |||||| | | || |||| Sbjct 33437 TATCTGCACTCCCTCGACCCCGTTGTACTACACCGAGACCTCAAGTCGATGAACATCCTG 33496 Query 1249637 CTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGG--TCTCGCGCGCATCCGCG 1249694 ||| ||| | ||| | | | || | |||||||||| |||||||| || | Sbjct 33497 CTG-TCGTC--CGACTGGGACGCGAAACTCACCGACTTTGGCGTCTCGCGC-CA-----G 33547 Query 1249695 AGGACAATGC-CACCATGACG--CGGTG-CGGCACGCCGGCG-TGGACGGCGCCCGAGGT 1249749 |||| || ||| |||||| ||| | |||||| | |||| |||| |||||||||||| Sbjct 33548 TGGACCGTGGACACGATGACGGCCGGCGTCGGCAC-CAGGCGGTGGATGGCGCCCGAGGT 33606 Query 1249750 CATCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCATCGT 1249803 ||| ||| ||||||||||| | |||||||| ||| |||| ||||| |||| Sbjct 33607 CATGATGGGCAAGCGCTACGACACGAGCGCCGACATCTTCTCGTTCGGCGTCGT 33660 >seq1696 Length=12083 Score = 86.0 bits (94), Expect = 1e-10 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 ||||| ||| | ||||| |||||||||||| | ||||||||| | || || || || | Sbjct 4844 CTCTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAGTCGCTGCTGGACCTGTCG 4785 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 ||| | ||||| | | |||||||||||| |||||||||| |||||| || ||| Sbjct 4784 TGCGCCAAGGTGGCGTGCATGATCAAGGGCAAGACGCCCGAGGAGATCCGCGCCACGTTT 4725 Query 2035749 AACATCA 2035755 ||||| Sbjct 4724 GGCATCA 4718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915242862391526