Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1023 414 1e-110 seq1050 167 2e-36 seq93 161 1e-34 seq584 136 4e-27 seq1009 134 1e-26 seq7744 113 4e-20 >seq1023 Length=18726 Score = 414 bits (458), Expect = 1e-110 Identities = 1218/1850 (66%), Gaps = 64/1850 (3%) Strand=Plus/Plus Query 147953 GCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGACGA 148012 ||||| ||||||||||| |||||||| ||| | ||| |||||| ||||| ||||| Sbjct 2204 GCGCATGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACG- 2262 Query 148013 CATGAGCGTGTAC---GTCGGGTGCGGC-ACAAACAGATTAAACGACTGGCTCTGGTCAA 148068 ||||| || ||||||| |||| | | || | |||||| |||||| || Sbjct 2263 --TGAGCTTGCTGATGGTCGGGT-CGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAA 2319 Query 148069 TGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTAT-CTTCATCTCCCAGGCC 148127 || |||| || ||||| || | || || | | ||| || | ||| |||||||| || Sbjct 2320 TGTACGCACCGCGGTCGGCCGACAGGTCCAGCAC-CGCCTTCTGCTTGATCTCCCACACC 2378 Query 148128 GTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGG 148187 ||||||||| | ||||| || || || || | | || | |||||| ||||||| | Sbjct 2379 GTCTTGTACTTCTCCTTGACGTGGTCCGGGATCGCCTTGACGTTCTGCACGGAGCCGCTG 2438 Query 148188 TGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCATCG 148247 | || ||||| ||||||| || ||| | | | |||||||||||| || | Sbjct 2439 TCGTTCAAGATCTGGTTGCGCACGTCCGGCGTCCAGATGCCGAGCTCGATCAGCTCCTTC 2498 Query 148248 ATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTG 148307 ||||| |||| || || | | ||||| || || ||||| || || |||| |||| Sbjct 2499 ATCAGGTACTTGTTGACGATCGTGAACTCTCCAGCCAGCACTCGGCGGTTGTACATGTTG 2558 Query 148308 CTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGC 148367 ||| |||| || | ||||||||||| || | ||||| || || | ||||| ||| Sbjct 2559 GACGTGTACGGCTCGATAGACTCGTTGTTTCCAAGGATCTGGGCCGTGGAAGCCGTCGGC 2618 Query 148368 ATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCC 148427 ||| || ||||||||||||||||| | ||| | || | | | ||| || | Sbjct 2619 ATGGGGGCCACCAGCAGCGAGTTGCGGAGTCCGTGCTTGATCACGTCCTCCTTGAGCGTA 2678 Query 148428 GCCCAGTCCCAGA---GCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCG 148484 ||||||| ||| | || |||||| || ||| |||||||||| |||| | ||||| Sbjct 2679 GCCCAGTTCCACATACCCGACGACGGGGTGACGCCCCACATGTCGAACTGGAAGATGCCC 2738 Query 148485 CGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAG 148544 ||||||||| ||||| | ||| |||||| ||| | || || | || || Sbjct 2739 TTGCTAGCGGGCGAGCCCTGGAACGTCTCGTACGGGCCGAGTTCCTTGGCGATCTC-CAT 2797 Query 148545 C-TCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGC 148603 | || ||| | ||| || |||| || |||||| || | | |||||||| | || Sbjct 2798 CGACGTCTCCATGGCGGCGAAGTAGATGGTCTCGAAGATGTTCTTGTTGAGCTCCCGGGC 2857 Query 148604 CGACTCGCTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGC 148662 | |||||| ||| || || || || | | ||||||||| || |||||||| |||| Sbjct 2858 CTTCTCGCTCTCGAAC-GCGTAGTTCATGAGGATAAACGCGTCCGCGAGGCCCTGGACGC 2916 Query 148663 CCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC---GGATAGT 148719 | | || ||||| ||||| |||||||| |||||| ||||| | || |||| Sbjct 2917 CAATACCGATGGGGCGGTGACGCATGTTGGACTTGCGCGC---CTCGATCACGGGGTAGT 2973 Query 148720 GGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCA 148779 |||| |||||||| ||||| | ||||| |||||||| || | || | | | Sbjct 2974 AGTTGACGTCGATGACCTTGTTTAAGTTGCGGGTGACCACCTTCGTCA--CTTCATACAA 3031 Query 148780 ATTCAAAATCGTACTTG---------TCATCTACGATGCATCGGTTCACGGCGATAGAGG 148830 ||| | ||| ||| || || |||| | | || || || | ||| | Sbjct 3032 CTTC----TGGTAGTTGAAAACTCCTTCCTCCACGA-ACTTAGG--CAGCGCCACAGACG 3084 Query 148831 CTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGAT 148890 | | |||||||| ||| ||| || || | ||||||| | | ||| ||| | | Sbjct 3085 CCAAGTTGCACACAGCCACCTCGTCTGGCGACGTGTACTCCATCACCTCACAGCATAAGT 3144 Query 148891 TGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGT 148950 ||||| | |||| ||| | ||||| || || ||||| |||| ||||||||||| Sbjct 3145 TGCTGGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGT 3204 Query 148951 ACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGT 149007 ||| ||| | || | || || || | ||| | |||| ||| ||||| ||| | Sbjct 3205 ACAACATAAAGGGCACTCCCGTCTCGATCTGGGCGTCCAATATGGCGAACC---ACAGCT 3261 Query 149008 CCTGCGCG-CGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGC 149066 ||| ||| | | | ||| | ||| |||||| |||||| ||| || | Sbjct 3262 GCTGGGCGTTGATCGTCTTGC-GGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCC 3320 Query 149067 TCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGAC 149126 ||||| | ||||| |||| || | ||| || ||| || || ||||| | ||| | Sbjct 3321 TCGAATTCGTCGCCCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGGGCAAAAGAGACTC 3380 Query 149127 CACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATG 149186 ||| ||| | || | ||| | |||||| |||||||| |||||||| || ||||| | Sbjct 3381 CACTTGCCATTGGCTTCCACCCTCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAAC 3440 Query 149187 AGGTCGC--GCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGT-TGAGCACGCTG 149243 ||||||| |||| |||| ||| ||| ||| || |||| || || | | Sbjct 3441 AGGTCGCGAGCGCGGTGCA--ACTCGTTGCCGTGGTTCTTACGGAGGTCCAAGAACTC-G 3497 Query 149244 AATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCG 149300 || | || |||||||| ||||| | || | |||| | |||||| |||||| ||| Sbjct 3498 AACACATCTGCGTGCCAAGGCTCCAAATAGATGGCGAAGGAGCCCTTACGCTTGCCTCCG 3557 Query 149301 CCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTG 149360 |||||||| |||| ||| | ||| ||||||||| || | ||| || |||||| || Sbjct 3558 CCCTGGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATTG 3617 Query 149361 GCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACG 149420 | | |||||| || | ||| ||| | ||||| | ||||||| ||| | Sbjct 3618 GACGAGCCGTTCGTGCCTCGGATGTAGCTGTTGGTGGCTCGGATGTTGTGCATACTGATG 3677 Query 149421 CCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCC 149480 || || || ||| | | || ||||| || || | | ||| ||| ||||| Sbjct 3678 CCAATACCTCCGGCCCATTTAGAGATACAGGCACATTGCTTTAACGTGTCGTAAATGCCT 3737 Query 149481 TCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTG 149540 || || |||| | ||||| || || ||||| || ||| ||| || ||||| Sbjct 3738 TCAATTGAGTCGTCTTGCATGGCCAATAGGAAGCAAGACGACAGTTGTGGGCGCGGCGTG 3797 Query 149541 CCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTAC 149600 ||||| || | || ||| |||| || || ||| | | || ||| | ||||||| Sbjct 3798 CCGGCGTTAAAAAGTGTCGGGGTGGCATGCGTGAAAAACATTTGCGACATGAGCTCGTAC 3857 Query 149601 GACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATA 149660 | ||| || || | |||| |||||||| | || |||||||| | ||| Sbjct 3858 GTCTCCAGGGCGGCCGCAATGTTGCTCTTGTGGATGCCAAGTGCCACGCGCATAATCATT 3917 Query 149661 TGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAA---GTAGCCGTTTTCTAGT 149717 |||||||| |||||| |||||||| || || | | || ||| ||| || || Sbjct 3918 TGCTGCGGACGCTCCACCACTTTG---CCGTTTACGCGGAAGAGGTACCCGCGCTCGAGA 3974 Query 149718 GTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767 || || | |||||||| | ||| |||||||| ||| ||||| ||||| Sbjct 3975 GTTTTAAACCCAAAGTAGTCGTAATCAAAGTCCCGGTCGTGGATGATGGC 4024 >seq1050 Length=18215 Score = 167 bits (184), Expect = 2e-36 Identities = 155/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| |||| || |||| |||||| ||||||||||| Sbjct 5194 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCG 5135 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| |||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct 5134 GCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTC 5075 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| || ||| | ||||||||||||| |||| ||| ||||| ||||| || Sbjct 5074 ACGTTGTCAATCGAGTCCGACGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAGCGTC 5015 Query 133644 TTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 5014 TTGACGAAAATCTGCAT 4998 Score = 159 bits (176), Expect = 3e-34 Identities = 154/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| |||| || |||| |||||| ||||||||||| Sbjct 5422 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCG 5363 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| |||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct 5362 GCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTC 5303 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || ||| | ||||||||||||| |||| ||| ||||| ||||| || Sbjct 5302 ACGTTGTCGATCGAGTCCGACGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAGCGTC 5243 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 5242 TTGACGAAGATCTGCATG 5225 >seq93 Length=57835 Score = 161 bits (178), Expect = 1e-34 Identities = 156/198 (79%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 54828 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCAAGCTGCTTGCC 54770 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || |||||||| |||||||| |||||||||||| Sbjct 54769 AGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTTTGCTT 54710 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || ||| | ||||||||||||| |||| || ||||| ||||| || Sbjct 54709 GACGTTGTCGATCGAGTCCGACGGCTCCACGTCGAGCGTGATCGTCTTGCCCGTCAGCGT 54650 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 54649 CTTCACGAAGATCTGCAT 54632 Score = 149 bits (164), Expect = 6e-31 Identities = 154/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 55056 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCAAGCTGCTTGCC 54998 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || |||||||| || ||||| |||||||||||| Sbjct 54997 AGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCTTTGTCCTGGATCTTTTGCTT 54938 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || ||| | ||||||||||| | |||| || ||||| ||||| || Sbjct 54937 GACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAGCGTGATCGTCTTGCCCGTCAGCGT 54878 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 54877 CTTCACAAAGATCTGCATG 54859 Score = 149 bits (164), Expect = 6e-31 Identities = 154/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 55284 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCAAGCTGCTTGCC 55226 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || |||||||| || ||||| |||||||||||| Sbjct 55225 AGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCTTTGTCCTGGATCTTTTGCTT 55166 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || ||| | ||||||||||| | |||| || ||||| ||||| || Sbjct 55165 GACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAGCGTGATCGTCTTGCCCGTCAGCGT 55106 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 55105 CTTCACAAAGATCTGCATG 55087 Score = 149 bits (164), Expect = 6e-31 Identities = 154/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 55512 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCAAGCTGCTTGCC 55454 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || |||||||| || ||||| |||||||||||| Sbjct 55453 AGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCTTTGTCCTGGATCTTTTGCTT 55394 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || ||| | ||||||||||| | |||| || ||||| ||||| || Sbjct 55393 GACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAGCGTGATCGTCTTGCCCGTCAGCGT 55334 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 55333 CTTCACAAAGATCTGCATG 55315 >seq584 Length=26749 Score = 136 bits (150), Expect = 4e-27 Identities = 503/773 (65%), Gaps = 30/773 (4%) Strand=Plus/Plus Query 120466 AGCAGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGC 120525 ||||| ||||| || || ||||| ||||| | ||||||| | || ||||||||| | | Sbjct 11111 AGCAGACGGTCGGCCACGAACTCGATGTATTGGCACATGAGCCCCGAGTTCATGCCGATC 11170 Query 120526 AACGCCACCGGCAACGCCG-ACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAA 120584 | | |||| || | || ||| | ||||| | ||| || |||||| || | Sbjct 11171 AGCTCCACAGGGAGCGAGTCACGC-ACGAACTCGTGCTCGATCGTCACCGCGTCGCGCAC 11229 Query 120585 CATGGCGAGCATAGTGTGGC---CGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACA- 120640 || || ||| | ||| | |||| ||||| | | | | || |||||| Sbjct 11230 GATCTCGTGCAC---GCGGCTCTCCGGCAGCTTGTTCACCA-----GCTTGG-AGTACAT 11280 Query 120641 --GGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 ||||||| ||||||||||||| ||||||||| || ||||||||||| || | Sbjct 11281 GAGGCACGCGAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCT 11340 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 |||||| ||||||| ||| | |||||| |||| || | | || |||||| || Sbjct 11341 CAGGCCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAA 11400 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGC- 120817 ||| | |||||||||| | || || || | || |||||| | ||| || | || || Sbjct 11401 GAAGATGCCCTCCACGGTTGCGAACGCCAGCACGCGCTCCGGGTACGACGAC-ACTCGCG 11459 Query 120818 TGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACG 120877 |||| |||||| | ||||| | || || || ||| ||||| ||| |||| | Sbjct 11460 GGTCGCACCACTTGAGCGCCCAGTGCGCTTTCTTCTTCACACACGGAATCGTATCGATGG 11519 Query 120878 CGTTCAGCAGCATGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGT 120937 | |||||| ||| ||| | | ||| || | | |||||||| | Sbjct 11520 CACGCAGCAGGTGGTCCTTCTCCGTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAAT 11579 Query 120938 ACATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGG---TTGTAAAAGTACTGCGCCT 120994 ||| |||| ||| | | |||||| || | |||| ||| ||| | | |||| Sbjct 11580 ACACCTCCGAGTGGATGTTCTCGAT-GGCGAT--CTGGAAACCGTAGAAGCAGCGGGCCT 11636 Query 120995 CCAGCTCGGGCACCGC-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCG 121053 || || | |||| | |||| | || | | ||||| |||||||| | |||| Sbjct 11637 CCGGCACCTGCACTTCATTGCTG-AAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCG 11695 Query 121054 GCGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTG 121113 ||| |||||||| ||||||||||||||||| ||| ||||||| |||||| || | Sbjct 11696 CTGGCAGCGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAG---G 11752 Query 121114 TGCGCAAAATCGTCATAGTCCTTGGACAGGTCGACCTCCTCCACCTTCCACATGCAATCG 121173 | ||| | || | ||| | | |||||| | |||||| || |||| | | | Sbjct 11753 TTCGCCCAGTCCTTCAGGTCGTGCGCCAGGTCCAGCTCCTCGGCCGTCCAGAACGAGGCC 11812 Query 121174 AGCGCCTGTTTATAAGCCGTCCACAGGTCGTTGTGTTGAATCGGGAACAGTAC 121226 ||||| || || | ||||| ||||| | || ||||||||||| || Sbjct 11813 TCCGCCTTCTTGTACATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCAC 11865 Score = 82.4 bits (90), Expect = 7e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||||||||| ||||||||||| |||||||| || ||||||| || ||| || ||| ||| Sbjct 6572 GTACTCGCCCACGCGTTTCTCGAAAAAGTTGGTCTTGCCCTACAGCGAGATCATGTCCAT 6631 Query 120414 AAACTCGAACGGGTTGCTCGCGT 120436 | ||||||||||| |||||| Sbjct 6632 CCAATCGAACGGGTTCTTCGCGT 6654 >seq1009 Length=18926 Score = 134 bits (148), Expect = 1e-26 Identities = 124/157 (79%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| | || || ||||||||||| || |||||||| ||||| Sbjct 8148 GTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTT 8207 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||| || ||||||| | |||| |||||| ||||||||||| | |||| Sbjct 8208 GTCCTGGATTTTCTGCTTGACATTGTCAATGCTGTCGGACGGCTCCACGTCCAGCGTGAT 8267 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||| ||||| ||||| || || || || ||||||||| Sbjct 8268 GGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 8304 >seq7744 Length=2697 Score = 113 bits (124), Expect = 4e-20 Identities = 137/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||||||||| ||||| ||||| |||||||| || ||||||| || ||| || ||| ||| Sbjct 2262 GTACTCGCCCACGCGCTTCTCGAAAAAGTTGGTCTTGCCCTGCAGCGAGATCATGTCCAT 2203 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAAC-TGTACGAGCAGTC 120472 | ||||||||||| | |||| || |||| | |||| | |||| ||||| | Sbjct 2202 CCAGTCGAACGGGTTCTTTACGTTGTAGATCTTCGACACACCCAGCGAGTAC-AGCAGAC 2144 Query 120473 GGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCA 120532 |||| || || ||||| ||||||| ||||||| | || ||||||||| | || | ||| Sbjct 2143 GGTCGGCCACGAACTCGATGTACTGGCACATGAGCCCCGAGTTCATGCCGATCAGCTCCA 2084 Query 120533 CCGG 120536 | || Sbjct 2083 CAGG 2080 Score = 104 bits (114), Expect = 2e-17 Identities = 380/586 (65%), Gaps = 13/586 (2%) Strand=Plus/Minus Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705 || ||||||||||||| ||||||||| || ||||||||||| || ||||||| Sbjct 1845 GCGAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCA 1786 Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACG 120765 ||||||| ||| | |||||| |||| |||| | || |||||| ||||| | | Sbjct 1785 GGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAAGAAGATG 1726 Query 120766 CCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGC-TGTCGAT 120824 |||||||| || || || | || ||||| | ||| || | || || |||| Sbjct 1725 CCCTCCACAGCTGCGAACGCCAGCAGACGCTCCGGGTACGACGAC-ACTCGCGGGTCGCA 1667 Query 120825 CCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAG 120884 |||||| | ||||| | || || || ||| ||||| ||| |||| || ||| Sbjct 1666 CCACTTGAGCGCCCAGTGCGCTTTCTTCTTCACACACGGGATCGTATCGATGGCACGCAG 1607 Query 120885 CAGCATGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTACATTTC 120944 ||| ||| ||| | ||| || | | |||||||| |||| || Sbjct 1606 CAGGTGGTCCTTCTCCGTTGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACACCTC 1547 Query 120945 CGTGTGCACGCACTCGATCAGCACTTGCTGG---TTGTAAAAGTACTGCGCCTCCAGCTC 121001 | ||| | | |||||| || | |||| ||| ||| | | |||||| || | Sbjct 1546 TGAGTGGATGTTCTCGAT-GGCGAT--CTGGAAACCGTAGAAGCAGCGGGCCTCCGGCAC 1490 Query 121002 GGGCACCGC-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGG 121060 |||| | |||| | || | | ||||| |||||||| | |||| ||| | Sbjct 1489 CTGCACTTCATTGCTG-AAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAG 1431 Query 121061 CGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTGTGCGCAA 121120 ||||||| ||||||||||||||||| ||| ||||||| |||||| || || ||| Sbjct 1430 CGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAG---GTTCGCCC 1374 Query 121121 AATCGTCATAGTCCTTGGACAGGTCGACCTCCTCCACCTTCCACATGCAATCGAGCGCCT 121180 | || | ||| | | |||||| | |||||| || |||| | | | ||||| Sbjct 1373 AGTCCTTCAGGTCGTGCGCCAGGTCCAGCTCCTCGGCCGTCCAGAACGAGGCCTCCGCCT 1314 Query 121181 GTTTATAAGCCGTCCACAGGTCGTTGTGTTGAATCGGGAACAGTAC 121226 || || | ||||| ||||| | || ||||||||||| || Sbjct 1313 TCTTGTACATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCAC 1268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483363792602160