Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq2043 82.4 8e-11 >seq2043 Length=11907 Score = 82.4 bits (90), Expect = 8e-11 Identities = 118/164 (72%), Gaps = 3/164 (2%) Strand=Plus/Minus Query 142570 GCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAA 142629 |||||||| || || || || | || ||||| || || ||||| |||||| | | ||| Sbjct 5313 GCGTGGAATCCGGCGGATCTCAATGAGATGGCGCTCCCGCCGTGCCACATGTTCTGCCAG 5254 Query 142630 TTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGG 142689 ||| |||| | | || | | || |||| |||||| |||| ||||| ||||| ||| | Sbjct 5253 TTCTACGTGGCC--GACGGCGAGT-TGTCCTGCCAGATGTACCAGCGCTCGGCCGACATG 5197 Query 142690 TTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCAC 142733 || ||||| ||||||||||| || |||||| | || || Sbjct 5196 GGACTTGGCGTGCCGTTCAACATCGCCAGCTACGCGTTGCTTAC 5153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500440178631840