Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1023 453 1e-122 seq7744 232 7e-56 seq584 224 1e-53 seq55 93.3 5e-14 >seq1023 Length=18726 Score = 453 bits (502), Expect = 1e-122 Identities = 1117/1674 (67%), Gaps = 44/1674 (3%) Strand=Plus/Minus Query 19166 GAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAAC 19225 ||||| ||||| || ||| || | ||| |||||||| || || ||||| ||||| ||| Sbjct 3862 GAGACGTACGAGCTCATGTCGCAAATGTTTTTCACGCATGCCACCCCGACACTTTTTAAC 3803 Query 19226 GCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGC 19285 ||||| ||| ||| || ||||| || |||||| |||| ||| | || ||| Sbjct 3802 GCCGGCACGCCGCGCCCACAACTGTCGTCTTGCTTCCTATTGGCCATGCAAGACGACTCA 3743 Query 19286 ATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGT 19345 ||||| ||||| ||||| ||| | ||| | || || ||||| || ||| |||| ||| Sbjct 3742 ATTGAAGGCATTTACGACACGTTAAAGCAATGTGCCTGTATCTCTAAATGGGCCGGAGGT 3683 Query 19346 ATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACA-CGA-ATCAATGGGACGAAC 19402 || || ||| ||| | || ||||| | | ||| | | ||| || |||||| Sbjct 3682 ATTGGCATCAGTATGCAC-AACATCCGAGCCACCA--ACAGCTACATCCGAGGCACGAAC 3626 Query 19403 GGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTC 19462 || || | || ||| |||| ||||| || || || ||| |||| || ||||||| Sbjct 3625 GGCTCGTCCAATGGCATCATCCCCATGCTGCGGGTGTTTAACGACACCGCGCGGTACGTG 3566 Query 19463 AACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCG 19522 ||||||| || ||||| || |||||||| ||||||||||| | ||||| |||||||| Sbjct 3565 GACCAGGGCGGAGGCAAGCGTAAGGGCTCCTTCGCCATCTATTTGGAGCCTTGGCACGCA 3506 Query 19523 GACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGC 19582 || || | || ||| | || || || |||||| || ||||| | ||| |||| Sbjct 3505 GATGTGTTCGAGTTCTTGGACCTCCGTAAGAACCACGGCAACGAGTTGCACCGCGCTCGC 3446 Query 19583 GACCTCTTC-ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAG---AAGGA 19638 ||||| ||| ||| |||| ||| | || || || |||||| ||| ||| || || | Sbjct 3445 GACCTGTTCTACGCCCTT-TGGGTGCCTGATCTGTTCATGAAGAGGGTGGAAGCCAATGG 3387 Query 19639 CGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698 | ||| ||| || | ||||| |||| |||||| || || || ||||| Sbjct 3386 C-AAG--TGGAGTCTCTTTTGCCCTAACGAGGCCCCTGGACTCTATGAGTGCTGGGGCGA 3330 Query 19699 GGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCG 19758 | ||| | | | || | |||| | |||| || | ||| | || Sbjct 3329 CGAATTCGAGGCCCTCTATGAAAAGTACGAGACGGAGGGACGCGCCCGCAAGACGATCAA 3270 Query 19759 GGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACAT 19818 |||| | | | ||| | | | | | |||| ||||||| || || | || Sbjct 3269 CGCCCAGCAGCTGTGGTTCGCCATATTGGACGCCCAGATCGAGACGGGAGTGCCCTTTAT 3210 Query 19819 GTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTC 19878 || ||||||||||| || ||| |||||| || ||| ||||| ||||| ||||| || Sbjct 3209 GTTGTACAAGGACGCGGCCAACCGCAAGTCGAACCAGCAGAACCTCGGCACGATCCGCTC 3150 Query 19879 GTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAA 19938 |||| | || ||| | |||||| | ||| |||||| || ||||| || Sbjct 3149 CAGCAACTTATGCTGTGAGGTGATGGAGTACACGTCGCCAGACGAGGTGGCTGTGTGCAA 3090 Query 19939 TCTGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATT 19998 ||||||| || ||||| | ||||| ||| ||| ||| || || Sbjct 3089 CTTGGCGTCTGTGGCGCTGCCTAAGTTCGTGGAGGAAGGAGTTTTCAACTACCAGAAGTT 3030 Query 19999 GTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA 20058 ||| || ||||| ||| ||||| || || | || |||||||| |||| || Sbjct 3029 GTATGAAGTGACGAAGGTGGTCACCCGCAACTTAAACAAGGTCATCGACGTCAACTACTA 2970 Query 20059 CCC---GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGT 20115 ||| || ||||||| |||||||| || ||||| ||||| || |||| || ||||| Sbjct 2969 CCCCGTGATCGAGGCG---CGCAAGTCCAACATGCGTCACCGCCCCATCGGTATTGGCGT 2913 Query 20116 CCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCC-AAGGCGC 20174 ||||||||| || |||| || || | | | | | ||||| || | ||||| | Sbjct 2912 CCAGGGCCTCGCGGACGCGTTTATCCTCATGAACTACGCGTTCGA-GAGCGAGAAGGCCC 2854 Query 20175 GCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCG 20234 | |||||||||||| |||||||||| || | ||| ||| ||| | | ||| | Sbjct 2853 GGGAGCTCAACAAGAACATCTTCGAGACCATCTACTTCGCCGCCATGGAGACGTCGATGG 2794 Query 20235 AACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTA 20294 | ||||||| || ||||||||||||||||||| |||| |||||||| | |||| | Sbjct 2793 AGATCGCCAAGGAACTCGGCCCGTACGAGACGTTCCAGGGCTCGCCCGCTAGCAAGGGCA 2734 Query 20295 TCCTCCAGCCGGACATGTGGGGCGTCAC--------TGAGAATG-AGTTTTGGAGCGCCC 20345 || ||||| ||||||||||||||||| | | ||| | ||| | | Sbjct 2733 TCTTCCAGTTCGACATGTGGGGCGTCACCCCGTCGTCGGGTATGTGGAACTGGGCTACGC 2674 Query 20346 TCAAGGTTGA---GATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGC 20402 |||||| || ||||||| ||||| || ||||||||| |||| || || ||||||| Sbjct 2673 TCAAGGAGGACGTGATCAAG---CACGGACTCCGCAACTCGCTGCTGGTGGCCCCCATGC 2617 Query 20403 CGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCA 20462 |||| || || || ||||||||| | || ||||||||| || |||||||||||||| ||| Sbjct 2616 CGACGGCTTCCACGGCCCAGATCCTTGGAAACAACGAGTCTATCGAGCCGTACACGTCCA 2557 Query 20463 ACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCC 20522 |||| ||| || || ||||| || |||||| || || |||||| ||||| | Sbjct 2556 ACATGTACAACCGCCGAGTGCTGGCTGGAGAGTTCACGATCGTCAACAAGTACCTGATGA 2497 Query 20523 GCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAA--TGAAATTGTCCGAGC 20580 || || || ||| || ||| |||| | | || || ||| ||| Sbjct 2496 AGGAGCTGATCGAGCTCGGCATCTGGACGCCGGACGTGCGCAACCAGATCTTGAACGA-- 2439 Query 20581 CGGCGGGAGCGTCCAG---GCATTGGATATCCCCCAGAACCTCAAGGACATTTACAGGAC 20637 | |||| ||| ||| | || ||||| | || ||||||| | |||| ||| Sbjct 2438 CAGCGGCTCCGTGCAGAACGTCAAGGCGATCCCGGACCACGTCAAGGAGAAGTACAAGAC 2379 Query 20638 CGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACAT 20697 || ||||| ||| |||||| | | ||| || ||||||| ||||| || ||||| Sbjct 2378 GGTGTGGGAGATCAAGCAGAAGGCGGTGCTGGACCTGTCGGCCGACCGCGGTGCGTACAT 2319 Query 20698 CGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTC 20757 |||| ||||||||||| || ||| | | |||| | | ||||| | || Sbjct 2318 TTGCCAGAGTCAGTCGCTCAACATCCACATCGCCGACCCGACCATCAGCAAGCTCACGTC 2259 Query 20758 CATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCG 20811 ||||| | |||| |||| | |||||||||||||| ||||||||||| |||| Sbjct 2258 GATGCACTTCTACGCCTGGAAGAAGGGGCTCAAGACCGGCATGTACTACATGCG 2205 Score = 425 bits (470), Expect = 6e-114 Identities = 1142/1724 (66%), Gaps = 48/1724 (3%) Strand=Plus/Plus Query 78193 CGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGAC 78252 |||| ||||||||||| |||||||| ||||||||||| |||| | |||||| || Sbjct 2205 CGCATGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACGTG 2264 Query 78253 AGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTAC 78312 |||||| | |||||| | ||| ||||||||||||||| |||| |||||| Sbjct 2265 AGCTTGCTGATGGTCGGGTCGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAATGTAC 2324 Query 78313 GCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGG 78372 |||||||||||||||| || ||| | |||| ||| ||| |||||||| | ||| | Sbjct 2325 GCACCGCGGTCGGCCGACAGGTCCAGCACCGCCTTCTGCTTGATCTCCCACACCGTCTTG 2384 Query 78373 TAAATGGCCTTCAGCTCTTCCTGGATGTCCAG--CGCT-TGTACGCTCCCACCGGCTCGC 78429 || | |||| | | ||| |||| || || | || ||| || | | | | Sbjct 2385 TACTTCTCCTTGACGTGGTCCGGGATCGCCTTGACGTTCTGCACGGAGCCGCTGTCGTTC 2444 Query 78430 ACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGGACCAGG 78489 | || | || | | || ||||| || || || ||| | |||| Sbjct 2445 AAGATCTGGTTGCGCACGTCCGGCGTCCAGATGCCGAGCTCGATCAGCTCCTTCATCAGG 2504 Query 78490 TGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTG 78549 | | ||| | || |||||| || ||||| ||||| ||| ||||||| |||| Sbjct 2505 TACTTGTTGACGATCGTGAACTCTCCAGCCAGCACTCGGCGGTTGTACATGTTGGACGTG 2564 Query 78550 TACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGT 78609 |||||||||| || ||||||||| || | ||||||||| || || || ||||||||||| Sbjct 2565 TACGGCTCGATAGACTCGTTGTTTCCAAGGATCTGGGCCGTGGAAGCCGTCGGCATGGGG 2624 Query 78610 GCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT--------TAGGC 78661 || ||||| || || || || || || ||| |||||| || ||| ||| | Sbjct 2625 GCCACCAGCAGCGAGTTGCGGAGTCCGTGC---TTGATCACGTCCTCCTTGAGCGTAGCC 2681 Query 78662 C-GTCCCAAAATTCATTCGCCGCGATC---CCCCACATGTCCGGTTGAAGGATACCCTCG 78717 | || ||| | | || || | | ||||||||||| || | ||| |||| | Sbjct 2682 CAGTTCCACATACCCGACGACGGGGTGACGCCCCACATGTCGAACTGGAAGATGCCCTTG 2741 Query 78718 GACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCAT-GA 78776 || ||||| |||| |||||||||||| | || |||||||||| || ||| || Sbjct 2742 CTAGCGGGCGAGCCCTGGAACGTCTCGTACGGGCCGAGTTCCTTGGCGATCTC-CATCGA 2800 Query 78777 CTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTT 78836 | || ||| ||| ||| | | |||||||||| |||||||||||| || ||||| Sbjct 2801 CGTCTCCATGGCGGCGAAGTAGATGGTCTCGAAGATGTTCTTGTTGAGCTCCCGGGCCTT 2860 Query 78837 GGTCTCG---TCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 |||| ||||||| | | | || || | || || |||||||||||||| Sbjct 2861 ---CTCGCTCTCGAACGCGTAGTTCATGAGGATAAACGCGTCCGCGAGGCCCTGGACGCC 2917 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAA 78950 ||| |||| || ||||| ||||||||| ||| || ||||||| || ||||| | Sbjct 2918 AATACCGATGGGGCGGTGACGCATGTTGGACTTGCG---CGCCTCGATCACGGGGTAGTA 2974 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| |||||||| ||| | ||| || ||||| ||| ||||| || ||||| || Sbjct 2975 GTTGACGTCGATGACCTTGTTTAAGTTGCGGGTGACCACCTTCGTCACTTCATACAACTT 3034 Query 79011 GGCGAAATC-AAAATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 | | | |||| ||||| | ||| | || || || || |||| ||||| Sbjct 3035 CTGGTAGTTGAAAACTCCTTCCTCC-ACGAACTTAGGCAGCGCCACAGACGCCAAGTTGC 3093 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 |||| ||| |||||| || | ||| || | || ||| || || || Sbjct 3094 ACACAGCCACCTCGTCTGGCGACGTGTACTCCATCACCTCACAGCATAAGTTGCTGGAGC 3153 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 ||| ||||||| ||||| |||||| ||| ||| ||||||||||| |||| Sbjct 3154 GGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGTACAACATAA 3213 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 | ||| || ||||| | ||| | | | | || ||| | | | |||| || Sbjct 3214 AGGGCACTCCCGTCTCGATCTGGGCGTCCAATATGGCGAACCACAGCTGCTGGGCGTTGA 3273 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 ||| | || |||| | ||||| | || | | | ||| | || | Sbjct 3274 TCGTCTTGCGGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCCTCGAATTCGTCGC 3333 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 | || || || || ||| ||||| ||||| | || ||| || | | | Sbjct 3334 CCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGGGCAAAAGAGACTCCA---CTTGCCAT 3390 Query 79370 TC---TCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGC 79426 | || ||| ||| |||||| || || || | ||| ||||| ||| |||||||| Sbjct 3391 TGGCTTCCACCCTCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAACAGGTCGCGAG 3450 Query 79427 AACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGT 79486 || | ||||| ||| |||||| ||| || || | || || | | || |||| Sbjct 3451 CGCGGTGCAACTCGTTGCCGTGGTTCTTACGGAGGTCCAAGAACTCGAACACATCTGCGT 3510 Query 79487 GCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGT 79546 |||| ||||||| |||||||||||| || ||||| |||||||| |||||||||| |||| Sbjct 3511 GCCAAGGCTCCAAATAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCCCTGGTCCACGT 3570 Query 79547 ACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGG-CGACGCCGTTC 79605 |||| || |||| ||| || || || |||||||| | |||||| | || ||| ||||||| Sbjct 3571 ACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATTGGACGA-GCCGTTC 3629 Query 79606 GTCCCGTTGAT-TCG-TGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCC 79662 || || ||| | | ||| | | || || ||||| | ||| ||| || || || Sbjct 3630 GTGCCTCGGATGTAGCTGT--TGGTGGCTCGGATGTT-GTGCATACTGATGCCAATACCT 3686 Query 79663 CCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAG 79722 |||| ||| || ||||| || || | ||| | ||| ||||| ||||| || || ||| Sbjct 3687 CCGGCCCATTTAGAGATACAGGCACATTGCTTTAACGTGTCGTAAATGCCTTCAATTGAG 3746 Query 79723 TCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTG 79782 ||||| | ||| || | |||||||| ||||| |||||| ||| |||||||| Sbjct 3747 TCGTCTTGCATGGCCAATAGGAAGCAAGACGACAGTTGTGGGCGCGGCGTGCCGGCGTTA 3806 Query 79783 AAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTG 79842 || || ||||| || || |||||||| ||| |||| ||| || |||||||||||| | Sbjct 3807 AAAAGTGTCGGGGTGGCATGCGTGAAAAACATTTGCGACATGAGCTCGTACGTCTCCAGG 3866 Query 79843 ACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 || || | || | ||||||||| | || |||||||| Sbjct 3867 GCGGCCGCAATGTTGCTCTTGTGGATGCCAAGTGCCACGCGCAT 3910 >seq7744 Length=2697 Score = 232 bits (256), Expect = 7e-56 Identities = 383/545 (70%), Gaps = 7/545 (1%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| ||||| ||| | || |||||| | | ||||||| | ||||| || |||| Sbjct 1305 TGTACAAGAAGGCGGAGGCCTCGTTCTGGACGGCCGAGGAGCTGGACCTGGCGCACGACC 1364 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 ||||||| |||| || || | || |||||| | ||||||||| || ||||||| Sbjct 1365 TGAAGGACTGGGCGAACCTGACGGACAACGAGCGGTTCTTCATCAAGCACGTGCTGGCCT 1424 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATG 59772 ||||||| || || || || || |||| || || | | ||||||||| ||| || | Sbjct 1425 TCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATGAACTTCAGCAATGAAG 1484 Query 59773 TCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCAC 59831 | ||| | | |||||||| | ||||||| | ||| ||| || |||| |||||| Sbjct 1485 TGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTTCCAGATCGC-CATCGAGAACATCCAC 1543 Query 59832 TCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGT 59891 || ||| ||| ||||| | || || | || |||||||| | ||||||| Sbjct 1544 TCAGAGGTGTATTCGCTGCTCATTGACACGTACATCAAGGATGCAACGGAGAAGGACCAC 1603 Query 59892 CTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAG 59951 ||| | |||||||| || ||| ||| || || | ||||| | ||||| | || Sbjct 1604 CTGCTGCGTGCCATCGATACGATCCCGTGTGTGAAGAAGAAAGCGCACTGGGCGCTCAAG 1663 Query 59952 TGGATGAGTCCTG-GAGCATCATT-TGCAC--AACGTCTCATAGCTTTTGCATGCGTGGA 60007 ||| || | || | ||| || | | | | | ||||| | || || ||| ||||| Sbjct 1664 TGG-TGCGACCCGCGAGTGTCGTCGTACCCGGAGCGTCTGCTGGCGTTCGCAGCTGTGGA 1722 Query 60008 AGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCAT 60067 || ||||||||||| ||||||||||| | || ||||||||||| ||||| |||||||| Sbjct 1723 GGGCATCTTCTTCTCGGGCTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCAT 1782 Query 60068 GCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTT 60127 ||| |||||||| ||||| ||||||||||| ||| ||||||||| | || ||| || Sbjct 1783 GCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGGCATGCACACGGACTT 1842 Query 60128 TGCAG 60132 |||| Sbjct 1843 CGCAG 1847 >seq584 Length=26749 Score = 224 bits (248), Expect = 1e-53 Identities = 370/526 (70%), Gaps = 7/526 (1%) Strand=Plus/Minus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| ||||| ||| | || |||||| | | ||||||| | ||||| || |||| Sbjct 11828 TGTACAAGAAGGCGGAGGCCTCGTTCTGGACGGCCGAGGAGCTGGACCTGGCGCACGACC 11769 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 ||||||| |||| || || | || |||||| | ||||||||| || ||||||| Sbjct 11768 TGAAGGACTGGGCGAACCTGACGGACAACGAGCGGTTCTTCATCAAGCACGTGCTGGCCT 11709 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATG 59772 ||||||| || || || || || |||| || || | | ||||||||| ||| || | Sbjct 11708 TCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATGAACTTCAGCAATGAAG 11649 Query 59773 TCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCAC 59831 | ||| | | |||||||| | ||||||| | ||| ||| || |||| |||||| Sbjct 11648 TGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTTCCAGATCGC-CATCGAGAACATCCAC 11590 Query 59832 TCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGT 59891 || ||| ||| ||||| | || || | || |||||||| || ||||||| Sbjct 11589 TCGGAGGTGTATTCGCTGCTCATTGACACGTACATCAAGGATGCGACGGAGAAGGACCAC 11530 Query 59892 CTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAG 59951 ||| | |||||||| || ||| || || || | ||||| | ||||| | || Sbjct 11529 CTGCTGCGTGCCATCGATACGATTCCGTGTGTGAAGAAGAAAGCGCACTGGGCGCTCAAG 11470 Query 59952 TGGATGAGTCCTG-GAGCATCATT-TGCAC--AACGTCTCATAGCTTTTGCATGCGTGGA 60007 ||| || | || | ||| || | | | | | || | | || || ||| |||||| Sbjct 11469 TGG-TGCGACCCGCGAGTGTCGTCGTACCCGGAGCGCGTGCTGGCGTTCGCAACCGTGGA 11411 Query 60008 AGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCAT 60067 || ||||||||||| ||||||||||| | || ||||||||||| ||||| |||||||| Sbjct 11410 GGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTCAAGAAGCGCGGCCTCAT 11351 Query 60068 GCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 ||| |||||||| ||||| ||||||||||| ||| ||||||||| Sbjct 11350 GCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGGC 11305 >seq55 Length=63587 Score = 93.3 bits (102), Expect = 5e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 159479 CGCTTCTGGGGGTCGCTCAGGACCTCATAGGCCTCCTGGACTTTCTTGAACTTCTCGGCG 159538 ||||||| |||||| ||| ||||| |||||| || || ||||||| ||| | | Sbjct 20992 CGCTTCTCCGGGTCGGACAGCACCTCGTAGGCCACCGTGATGGTCTTGAAGAGCTCCGGG 21051 Query 159539 TCACCGCCCTTGTCGGGGTGGTGCTCGCGGGCAAGTTTGCGGTACGCCTTTTTGATGTCG 159598 || ||||||||||| ||||||| || | | || || |||||||| ||||| ||||| ||| Sbjct 21052 TCGCCGCCCTTGTCCGGGTGGTTCTTGAGCGCCAGCTTGCGGTAGGCCTTCTTGATCTCG 21111 Query 159599 G 159599 | Sbjct 21112 G 21112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548460115212960