Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1023 300 2e-76 seq1009 136 5e-27 seq93 129 7e-25 seq1167 127 2e-24 seq1050 127 2e-24 seq7744 118 1e-21 seq584 105 8e-18 seq58 87.8 2e-12 >seq1023 Length=18726 Score = 300 bits (332), Expect = 2e-76 Identities = 951/1453 (65%), Gaps = 46/1453 (3%) Strand=Plus/Plus Query 80036 GCGTCCGCAGAT--AGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCAT 80093 |||||||| || |||||||||| |||||||| |||||||||||| |||| | |||||| Sbjct 2198 GCGTCCGCGCATGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCAT 2257 Query 80094 AGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACA 80153 || ||||||| | || |||| | ||| |||||| || |||||| ||| || Sbjct 2258 CGACGTGAGCTTGCTGATGGTCGGGTCGGCGATGTGGATGTTGAGCGACTGACTCTGGCA 2317 Query 80154 GATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATAC 80213 ||| | || || || || |||| || || | | | ||| || || ||||| || Sbjct 2318 AATGTACGCACCGCGGTCGGCCGACAGGTCCAGCACCGCCTTCTGCTTGATCTCCCACAC 2377 Query 80214 -----TGTACGATACACCTTACGAAGCTCCTCTGGAATGTCCA-GA--TTTTGCACACTG 80265 ||||| | | |||| || | | || || || || || || ||||| | Sbjct 2378 CGTCTTGTAC--TTCTCCTT--GACG-TGGTCCGGGATCGCCTTGACGTTCTGCACGGAG 2432 Query 80266 CCACCGTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGA 80325 || | ||| || | || || || || || | |||||||| || |||| | ||| Sbjct 2433 CCGCTGTCGTTCAAGATCTGGTTGCGCACGTCCGGCGTCCAGATGCCGAGCTCGATCAGC 2492 Query 80326 TCTTTCACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATAC 80385 || |||| |||| |||||| | || |||||||| || || || || ||| Sbjct 2493 TCCTTCATCAGGTACTTGTTGACGATCGTGAACTCTCCAGCCAGCACTCGGCGGTTGTAC 2552 Query 80386 AGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCC 80445 | ||| | ||||| ||||| | | |||||||||||| |||||||| |||||| ||| Sbjct 2553 ATGTTGGACGTGTACGGCTCGATAGACTCGTTGTTTCCAAGGATCTGGGCCGTGGAAGCC 2612 Query 80446 GTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTC---- 80501 |||||||| ||| | |||| ||| || || || || |||||||| | | ||||| Sbjct 2613 GTCGGCATGGGGGCCACCAGCAGCGAGTTGCGGAGTCCGTGCTTGATCACGTCCTCCTTG 2672 Query 80502 -GCGCAAATCTGA-CCAAAAATCAACCCCAACGCTGTGAC--CCCACATGTCGTGCTGCA 80557 ||| | | | ||| | | | | | ||| ||||| ||||||||||| ||| | Sbjct 2673 AGCGTAGCCCAGTTCCACATACC--CGACGACGGGGTGACGCCCCACATGTCGAACTGGA 2730 Query 80558 AGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCA 80617 ||||||||| || || || ||| |||||||||||||||||| |||||| | Sbjct 2731 AGATGCCCTTGCTAGCGGGCGAGCCCTGGAACGTCTCGTACGGGCCGAGTTCCTTGGCGA 2790 Query 80618 GCTC---ACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCA 80674 ||| ||| |||||| ||| ||| || ||| ||| |||| | |||||| | Sbjct 2791 TCTCCATCGACGTCTCCAT---GGCGGCGAAGTAGATGGTCTCGAAGATGTTCTTGTTGA 2847 Query 80675 CACCGCGCGCC-TGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGG 80733 | || ||| | | | || ||||||| || ||| | || ||| |||| || ||| Sbjct 2848 GCTCCCGGGCCTTCTCGCTC-TCGAACGCGTAGTTCATGAGGATAAACGCGTCCGCGAGG 2906 Query 80734 CCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA-TCGCTCGGCCTCCGGAAT 80792 ||||| ||||| || |||| |||||||| ||| |||| || | || | ||||| | Sbjct 2907 CCCTGGACGCCAATACCGATGGGGCGGTGACGCATGTTGGACTTGCGC-GCCTCGATCAC 2965 Query 80793 TGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATC 80852 ||||| |||| |||||||| ||| | |||||| || || ||| || || || Sbjct 2966 GGGGTAGTAGTTGACGTCGATGACCTTGTTTAAGTTGCGGGTGACCACCTTCGTCACTTC 3025 Query 80853 ATGAAGTTTCTGAAAGTCG--AATTGGTTCCCCTTCACAAATGCCGGAAGGCTCAGGGAC 80910 || | ||||| ||| | || | || ||| ||| || || || || ||| Sbjct 3026 ATACAACTTCTGGTAGTTGAAAACTCCTT--CCTCCACGAACTTAGGCAGCGCCACAGAC 3083 Query 80911 GCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAA 80970 |||| |||||||| |||||||| || | || |||| | | || ||| || Sbjct 3084 GCCAAGTTGCACACAGCCACCTCGTCTGGCGACGTGTACTCCATCACCTCACAGCATAAG 3143 Query 80971 TTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTG 81030 || || || || || ||||| | |||||| |||||| |||| ||||||||| Sbjct 3144 TTGCTGGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTG 3203 Query 81031 TAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCG 81090 || |||| | || || ||||||| ||| | | | |||||| ||| | || Sbjct 3204 TACAACATAAAGGGCACTCCCGTCTCGATCTGGGCGTCCAATATGGCGAACCACAGCTGC 3263 Query 81091 CGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCG 81150 | || |||| | ||||||| || || | | | ||||| | || | ||| Sbjct 3264 TGGGCGTTGATCGTCTTGCGGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCCTCG 3323 Query 81151 AACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAG 81210 || | | | || ||| ||| | ||| |||||||||||| | || ||| Sbjct 3324 AATTCGTCGCCCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGGGCAAAAGAGACTCCAC 3383 Query 81211 TCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGG 81270 | | | | || || ||||||||| ||||| | ||| |||||| ||||||| Sbjct 3384 TTGCCATTGGCTTCCACCCTCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAACAGG 3443 Query 81271 TCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGA 81328 ||||| |||||| | ||| | || ||||| || | || | || || | | Sbjct 3444 TCGCG--AGCGCGGTGCAACTCGTTGCCGTGGTTCTTACGGAGGTCCAAGAACTCGAACA 3501 Query 81329 TGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCT 81385 || || ||||| ||||||| ||| | ||||| || ||||| || | || |||| Sbjct 3502 CATCTGCGTGCCAAGGCTCCAAATAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCCCT 3561 Query 81386 GGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACT 81445 ||| ||||| || || || ||||||| || |||| ||| |||||||| |||| ||| Sbjct 3562 GGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATTGGACG 3621 Query 81446 GACCGTTCGTACC 81458 |||||||| || Sbjct 3622 AGCCGTTCGTGCC 3634 >seq1009 Length=18926 Score = 136 bits (150), Expect = 5e-27 Identities = 146/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| |||||||| ||||| || || |||||||| || || || || || ||| | Sbjct 8306 ATCATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCG 8247 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || ||||||| ||| | ||| ||||| |||||||||||||| || || || ||| Sbjct 8246 TCCGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGCATCCCGCCTGAC 8187 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| || || || ||||| ||||| |||||||| | || || ||| | ||||| Sbjct 8186 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTATCGGACTAC 8127 Query 27583 AATGTCCAAAAGG 27595 || |||| |||| Sbjct 8126 AACATCCAGAAGG 8114 >seq93 Length=57835 Score = 129 bits (142), Expect = 7e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| || |||||||| || || || || || ||| | Sbjct 54632 ATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCGTCG 54691 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| || || |||||||||||||| || || || |||||| Sbjct 54692 GACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 54751 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||| ||||| || ||||| | ||| || || ||| ||||| || Sbjct 54752 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGC-GACTACAA 54810 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || ||||||| |||||||| Sbjct 54811 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGG 54858 Score = 129 bits (142), Expect = 7e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| |||||||| || |||||||| || || || || || ||| | Sbjct 54860 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 54919 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| || || |||||||| ||||| || || || |||||| Sbjct 54920 GACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAAGAGGGCATCCCGCCTGACCAG 54979 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||| ||||| || ||||| | ||| || || ||| ||||| || Sbjct 54980 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGC-GACTACAA 55038 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || ||||||| |||||||| Sbjct 55039 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGG 55086 Score = 129 bits (142), Expect = 7e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| |||||||| || |||||||| || || || || || ||| | Sbjct 55088 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 55147 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| || || |||||||| ||||| || || || |||||| Sbjct 55148 GACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAAGAGGGCATCCCGCCTGACCAG 55207 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||| ||||| || ||||| | ||| || || ||| ||||| || Sbjct 55208 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGC-GACTACAA 55266 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || ||||||| |||||||| Sbjct 55267 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGG 55314 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| |||||||| || |||||||| || || || || || ||| | Sbjct 55316 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 55375 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| || || |||||||| ||||| || || || |||||| Sbjct 55376 GACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAAGAGGGCATCCCGCCTGACCAG 55435 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||| ||||| || ||||| | ||| || || ||| ||||| || Sbjct 55436 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGC-GACTACAA 55494 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || ||||| || || || || || || |||| ||||| |||||| Sbjct 55495 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTTCGTGGTGGA 55543 >seq1167 Length=16615 Score = 127 bits (140), Expect = 2e-24 Identities = 181/253 (72%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 31999 TCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTG 32058 || |||||||||||| | | |||||| || ||| || || |||| || |||||||| Sbjct 15023 TCGCAGCGCAAGGTGCTTTTCGCCTGTCTGAAGCGCAAGCTAACGAGCGAGGTGAAGGTG 15082 Query 32059 GCGCAGCTGTCGGGCTACGTGGCA--GAGCAAACGGCCTATCACCACGGCGAGGCGTCGC 32116 || ||||| | || ||| ||| || || |||||||| |||||||||||||| ||| Sbjct 15083 GCACAGCTTGCTGGTTAC--TGCAGTGAACACACGGCCTACCACCACGGCGAGGCTTCGT 15140 Query 32117 TCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTAC 32176 | || || ||||| ||| | || ||| |||| || || | || ||||| | | Sbjct 15141 TACACTCGACGATTGTGAACATGGCACAGGACTTCGTGGGCTCCAACAACCTTCCGCTGC 15200 Query 32177 TCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCC 32236 | | || || || |||||||| || || || || ||||| ||||| || ||| | | Sbjct 15201 TGTATCCGTCCGGTCAGTTTGGTACTCGACTACAGGGAGGCAAAGATGCCGCTAGCCCTC 15260 Query 32237 GTTACATCTTCAC 32249 ||||||||||||| Sbjct 15261 GTTACATCTTCAC 15273 >seq1050 Length=18215 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||||| || |||||||| || || || || || ||| | Sbjct 5226 ATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTCG 5285 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| || ||||||||||||||||| || || || |||||| Sbjct 5286 GACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 5345 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || || || ||||| || ||||| | || || || ||| ||||| || Sbjct 5346 CAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGC-GACTACAA 5404 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| || || || || || || |||| || || |||||| Sbjct 5405 CATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGGCTGCGTGGTGGA 5453 Score = 122 bits (134), Expect = 1e-22 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || ||||||||||| || |||||||| || || || || || ||| | Sbjct 4997 AATGCAGATTTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTC 5056 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || |||| || ||||| || ||||||||||||||||| || || || ||||| Sbjct 5057 GGACTCGATTGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 5116 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 |||||| || || || || || ||||| || ||||| | || || || ||| ||||| | Sbjct 5117 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGC-GACTACA 5175 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| || || || || || || |||| || || || || Sbjct 5176 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGGCTGCGTGGCGG 5224 >seq7744 Length=2697 Score = 118 bits (130), Expect = 1e-21 Identities = 348/533 (65%), Gaps = 5/533 (1%) Strand=Plus/Plus Query 64319 TGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCG 64378 ||||| || | |||||||| || || |||||||||| ||||||| | || || | Sbjct 1296 TGTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTGGACGGCCGAGGAGCTGGACCTGG 1355 Query 64379 CCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG-GAACAGCACTTCATCAAGTTG 64437 | | || || | ||||||| ||||| | | ||| || | | |||||||||| Sbjct 1356 CGCACGACCTGAAGGACTGGGCGAACCTGA-CGGACAACGAGCGGTTCTTCATCAAGCAC 1414 Query 64438 GTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAATTTT 64497 || || || |||||||| | || ||||| || ||| ||||| ||| | | || || Sbjct 1415 GTGCTGGCCTTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATGAACTTC 1474 Query 64498 ACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAACGAA 64557 | || || || ||| | || ||||| || | ||||| | | ||| | ||| Sbjct 1475 AGCAATGAAGTGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTTCCAGATCGCCATCGAG 1534 Query 64558 AGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAG 64617 | || || ||| ||||||||| | ||||||| || | |||| | ||| Sbjct 1535 AACATCCACTCAGAGGTGTATTCGCTGCTCATTGACACGTACATCAAGGATGCAACGGAG 1594 Query 64618 AAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGG 64677 ||||| ||| | | || || || || | || ||| | || || || | ||| Sbjct 1595 AAGGACCACCTGCTGCGTGCCATCGATACGATCCCGTGTGTGAAGAAGAAAGCGCACTGG 1654 Query 64678 GCCATCCGGTGGATGAATC---GTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCC 64734 || || |||| | | | | |||||||| ||||||| || || || Sbjct 1655 GCGCTCAAGTGGTGCGACCCGCGAGTGTCGTCGTACCCGGAGCGTCTGCTGGCGTTCGCA 1714 Query 64735 TGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGG 64794 |||||| || || ||||| || || || ||||| || || |||||||| || ||||| Sbjct 1715 GCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGC 1774 Query 64795 GGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 ||||| ||||| || ||| || ||||||||||||||| || |||||||| Sbjct 1775 GGCCTCATGCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGG 1827 >seq584 Length=26749 Score = 105 bits (116), Expect = 8e-18 Identities = 345/533 (65%), Gaps = 5/533 (1%) Strand=Plus/Minus Query 64319 TGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCG 64378 ||||| || | |||||||| || || |||||||||| ||||||| | || || | Sbjct 11837 TGTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTGGACGGCCGAGGAGCTGGACCTGG 11778 Query 64379 CCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG-GAACAGCACTTCATCAAGTTG 64437 | | || || | ||||||| ||||| | | ||| || | | |||||||||| Sbjct 11777 CGCACGACCTGAAGGACTGGGCGAACCTGA-CGGACAACGAGCGGTTCTTCATCAAGCAC 11719 Query 64438 GTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAATTTT 64497 || || || |||||||| | || ||||| || ||| ||||| ||| | | || || Sbjct 11718 GTGCTGGCCTTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATGAACTTC 11659 Query 64498 ACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAACGAA 64557 | || || || ||| | || ||||| || | ||||| | | ||| | ||| Sbjct 11658 AGCAATGAAGTGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTTCCAGATCGCCATCGAG 11599 Query 64558 AGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAG 64617 | || || ||| ||||||||| | ||||||| || | |||| | ||| Sbjct 11598 AACATCCACTCGGAGGTGTATTCGCTGCTCATTGACACGTACATCAAGGATGCGACGGAG 11539 Query 64618 AAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGG 64677 ||||| ||| | | || || || || | || ||| | || || || | ||| Sbjct 11538 AAGGACCACCTGCTGCGTGCCATCGATACGATTCCGTGTGTGAAGAAGAAAGCGCACTGG 11479 Query 64678 GCCATCCGGTGGATGAATC---GTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCC 64734 || || |||| | | | | |||||||| |||| | || || || Sbjct 11478 GCGCTCAAGTGGTGCGACCCGCGAGTGTCGTCGTACCCGGAGCGCGTGCTGGCGTTCGCA 11419 Query 64735 TGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGG 64794 ||||| || || ||||| || || || ||||| || || |||||||| || ||||| Sbjct 11418 ACCGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTCAAGAAGCGC 11359 Query 64795 GGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 ||||| ||||| || ||| || ||||||||||||||| || |||||||| Sbjct 11358 GGCCTCATGCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGG 11306 >seq58 Length=62634 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 32034 GAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGC 32093 |||||||| | || |||||||||| || || | || || ||| ||||||| | || Sbjct 52458 GAACCTGTAGTCGGAGCTGAAGGTGGCACAATTGGCTGGTTATGTGTCAGAGCACTCCGC 52399 Query 32094 CTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGT 32153 || || ||||||||| | | |||||| || |||||| | |||||| ||||||| Sbjct 52398 GTACCATCACGGCGAGCAGAGTTTGCAGGGCTGTATCGTCAACATGGCTCAGGACTTTGT 52339 Query 32154 CGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGG 32213 ||| || ||| | || | || |||| || ||||| || || || | || Sbjct 52338 CGGAAGCAACAACATCCACCTCCTGTCGCCAATCGGTCAGTTCGGTACGCGTTTGATGGG 52279 Query 32214 TGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC 32249 ||||||||||| || ||| | ||||| || ||||| Sbjct 52278 CGGCAAGGATGCAGCCAGCGCTCGTTATATTTTCAC 52243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570243146146080