Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20rubi_20[genbank_20GCA_5F002025925.1_202017-03-14] 9,434 sequences; 74,863,594 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3101 181 3e-40 seq93 147 5e-30 seq8464 143 6e-29 seq1050 143 6e-29 seq8659 131 4e-25 seq6198 131 4e-25 seq1009 120 7e-22 seq8094 118 3e-21 seq9013 102 2e-16 seq7855 100 7e-16 seq1023 100 7e-16 >seq3101 Length=6013 Score = 181 bits (200), Expect = 3e-40 Identities = 213/288 (74%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 ||| ||||||||||| ||| ||| ||| | |||||| | ||||| | || || | | Sbjct 6003 AACTTTATATTTAATTTTTAGTGCTTTTGCGGGTATTGTTGGTACAACTTTATCACTTTT 5944 Query 7500 TATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTA 7559 || || | |||||||| |||||| ||| || || | || ||| ||| | || Sbjct 5943 AATTAGAATGGAATTAGCACAACCGGGTAATCAGATTTTAATGGGAAATCATCAATTATA 5884 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 || || ||| | || || ||||||||| | ||| |||||||||| |||||||| | | Sbjct 5883 TAATGTAATTGTAACTGCACATGCCTTTATAATGGTTTTCTTTTTAGTTATGCCTGCCTT 5824 Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679 || || ||||| || ||||| || || |||||||||||||||||||| ||||||||||| Sbjct 5823 AATTGGTGGTTTTGGTAATTGGTTTGTACCTTTAATGATTGGTGCTCCAGATATGGCTTT 5764 Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATT 7727 |||| | | || ||||| |||||||| ||| |||| || | ||||| Sbjct 5763 TCCACGTATGAATAATATTAGTTTTTGGTTATTACCTCCAGCTTTATT 5716 Score = 109 bits (120), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 || |||||| |||| | | |||||| || ||||||||||| | || || | |||||| Sbjct 5497 AAAGGTAATCTATGAAAACTTAAACCTGGAGCTCTCATATTATAAATAGTTGAAATAAAA 5556 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 |||||||| |||| | ||||| ||||||| | |||||||||||| ||||| ||||| Sbjct 5557 TTTATAGCACCTAATAATGAAGAAATACCTGTTAAATGTAAACTAAAAATTGCCAAATCT 5616 Query 371485 ACGGAACCGCCGGAGTGAGC---TACAATAGAACTTAACGGCGGGTAAACTGTTCAGCCG 371541 || ||| || || || || |||| | || ||| || || |||||||| || || Sbjct 5617 ACTGAAGGTCCTGAATGTGCTTGTACACTTGA---TAATGGTGGATAAACTGTCCAACCT 5673 Query 371542 GT 371543 || Sbjct 5674 GT 5675 Score = 104 bits (114), Expect = 6e-17 Identities = 86/104 (83%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| |||||||||||||| || |||||||||||||| || | ||||| || || || || Sbjct 5319 TTCGGGATGACCAAAAAACCAAAATAAATGTTGATATAGTACTGGATCTCCCCCACCAGA 5378 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 |||||| |||| |||||| ||||||||||||||||| |||| Sbjct 5379 AGGATCATAAAAAGAAGTATTTAAATTTCTATCAGTTAATAACA 5422 >seq93 Length=57835 Score = 147 bits (162), Expect = 5e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || ||||| || || || || || || | ||||| ||| || || Sbjct 54852 CGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTG 54793 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| ||||||||||| || || || ||||| ||||| || || Sbjct 54792 CGACCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCC 54733 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||||||||| || ||||| | ||| || | |||||||| | | Sbjct 54732 TCCTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCACGTCGAGC 54673 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||||||||||| || || | ||| | ||||| Sbjct 54672 GTGATCGTCTTGCCCGTCAGCGTCTTCACGAAGATCTGCAT 54632 Score = 145 bits (160), Expect = 2e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||| || ||||| || || || || || || | ||||| ||| || || Sbjct 55537 ACGAAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGT 55478 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| || || || ||||| ||||| || || Sbjct 55477 GCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCC 55418 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||||| |||||||||||||| || ||||| | ||| || | |||||||| | Sbjct 55417 CTCTTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAG 55358 Query 225672 CGTGATCGTCTTGCCCGTCA 225691 |||||||||||||||||||| Sbjct 55357 CGTGATCGTCTTGCCCGTCA 55338 Score = 138 bits (152), Expect = 3e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || ||||| || || || || || || | ||||| ||| || || Sbjct 55080 CGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTG 55021 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| ||||||||||| || || || ||||| ||||| || || Sbjct 55020 CGACCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCC 54961 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || ||||| |||||||||||||| || ||||| | ||| || | |||||||| | | Sbjct 54960 TCTTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAGC 54901 Query 225673 GTGATCGTCTTGCCCGTCA 225691 ||||||||||||||||||| Sbjct 54900 GTGATCGTCTTGCCCGTCA 54882 Score = 138 bits (152), Expect = 3e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || ||||| || || || || || || | ||||| ||| || || Sbjct 55308 CGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTG 55249 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| ||||||||||| || || || ||||| ||||| || || Sbjct 55248 CGACCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCC 55189 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || ||||| |||||||||||||| || ||||| | ||| || | |||||||| | | Sbjct 55188 TCTTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAGC 55129 Query 225673 GTGATCGTCTTGCCCGTCA 225691 ||||||||||||||||||| Sbjct 55128 GTGATCGTCTTGCCCGTCA 55110 >seq8464 Length=1992 Score = 143 bits (158), Expect = 6e-29 Identities = 130/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 7564 GTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATA 7623 ||| || | || || ||||||||| | ||| |||||||||| |||||||| | | || Sbjct 431 GTTTTTGTAACTGCACATGCCTTTATAATGGTTTTCTTTTTAGTTATGCCTGCCTTAATT 372 Query 7624 GGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCA 7683 || ||||| || ||||| || || |||||||||||||||||||| ||||||||||||||| Sbjct 371 GGTGGTTTTGGTAATTGGTTTGTACCTTTAATGATTGGTGCTCCAGATATGGCTTTTCCA 312 Query 7684 AGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATT 7727 | | || ||||| |||||||| ||| |||| || | ||||| Sbjct 311 CGTATGAATAATATTAGTTTTTGGTTATTACCTCCAGCTTTATT 268 Score = 104 bits (114), Expect = 6e-17 Identities = 133/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 || |||||| ||| | | |||||| || ||||||||||| | || || | |||||| Sbjct 49 AAAGGTAATCGATGAAAACTTAAACCGGGAGCTCTCATATTATAAATAGTTGAAATAAAA 108 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 |||||||| |||| | ||||| ||||||| | |||||||||||| ||||| ||||| Sbjct 109 TTTATAGCACCTAATAATGAAGAAATACCTGTTAAATGTAAACTAAAAATTGCCAAATCT 168 Query 371485 ACGGAACCGCCGGAGTGAGC---TACAATAGAACTTAACGGCGGGTAAACTGTTCAGCCG 371541 || ||| || || || || |||| | || ||| || || |||||||| || || Sbjct 169 ACTGAAGGTCCTGAATGTGCTTGTACACTTGA---TAATGGTGGATAAACTGTCCAACCT 225 Query 371542 GT 371543 || Sbjct 226 GT 227 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 ||| ||||||||||| ||| ||| ||| |||||||| | ||||| | || || | | Sbjct 619 AACTTTATATTTAATTTTTAGTGCTTTTGCTGGTATTGTTGGTACAACTTTATCACTTTT 560 Query 7500 TATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTA 7559 || || | |||||||| || ||| |||||| || | || ||| ||| | || Sbjct 559 AATTAGAATGGAATTAGCACAACCTGGTAATCAAATTTTAATGGGAAATCATCAATTATA 500 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 || || ||| | || || ||||||||| | ||| |||||||||| |||||||| | | Sbjct 499 TAATGTAATTGTAACTGCACATGCCTTTATAATGGTTTTCTTTTTAGTTATGCCTGCCTT 440 Query 7620 GATAGGCGGTTT 7631 || || ||||| Sbjct 439 AATTGGTGGTTT 428 >seq1050 Length=18215 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || || || || || |||| ||||| ||| || || Sbjct 5447 ACGCAGCCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGT 5388 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| || || || ||||||||||| || || Sbjct 5387 GCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCC 5328 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| |||||||| ||||| | ||| || | |||||||| | Sbjct 5327 CTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCCACGTCGAG 5268 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||||||||||| || || | ||| | ||||| Sbjct 5267 CGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCAT 5226 Score = 141 bits (156), Expect = 2e-28 Identities = 165/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || || || || || |||| ||||| ||| || || Sbjct 5219 ACGCAGCCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGT 5160 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| || || || ||||||||||| || || Sbjct 5159 GCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCC 5100 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| |||||||| || || | ||| || | |||||||| | Sbjct 5099 CTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCAATCGAGTCCGACGGCTCCACGTCGAG 5040 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||||| ||||||||||||| || || | ||| | |||||| Sbjct 5039 CGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAAATCTGCATT 4997 >seq8659 Length=3835 Score = 131 bits (144), Expect = 4e-25 Identities = 99/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||| ||||||||||| || |||||||| || ||||||||||||||||||||||| Sbjct 1902 GAAAATTTGTCCATCAGTAATTGATATAACATTAGTTGGGATATAAGCAGAAACATCACC 1843 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTTTATT 4586 ||||| ||||| | || ||||| ||||||| ||| || ||||||| |||||||| Sbjct 1842 AGCTTGAGTTTCAATAATTGGTAAAGCTGTTAATGAACCTCCACCAATTTTTTTATT 1786 Score = 131 bits (144), Expect = 4e-25 Identities = 99/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||| ||||||||||| || |||||||| || ||||||||||||||||||||||| Sbjct 2183 GAAAATTTGTCCATCAGTAATTGATATAACATTAGTTGGGATATAAGCAGAAACATCACC 2124 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTTTATT 4586 ||||| ||||| | || ||||| ||||||| ||| || ||||||| |||||||| Sbjct 2123 AGCTTGAGTTTCAATAATTGGTAAAGCTGTTAATGAACCTCCACCAATTTTTTTATT 2067 >seq6198 Length=2064 Score = 131 bits (144), Expect = 4e-25 Identities = 99/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||| ||||||||||| || |||||||| || ||||||||||||||||||||||| Sbjct 277 GAAAATTTGTCCATCAGTAATTGATATAACATTAGTTGGGATATAAGCAGAAACATCACC 218 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTTTATT 4586 ||||| ||||| | || ||||| ||||||| ||| || ||||||| |||||||| Sbjct 217 AGCTTGAGTTTCAATAATTGGTAAAGCTGTTAATGAACCTCCACCAATTTTTTTATT 161 >seq1009 Length=18926 Score = 120 bits (132), Expect = 7e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| ||||||||||| || || || ||||| ||||| || || ||| Sbjct 8146 CCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCC 8205 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| ||||| || ||||| ||| || ||| |||| || | |||||||| | |||| Sbjct 8206 TTGTCCTGGATTTTCTGCTTGACATTGTCAATGCTGTCGGACGGCTCCACGTCCAGCGTG 8265 Query 225676 ATCGTCTTGCCCGTCA 225691 || ||||||||||||| Sbjct 8266 ATGGTCTTGCCCGTCA 8281 >seq8094 Length=3401 Score = 118 bits (130), Expect = 3e-21 Identities = 103/125 (82%), Gaps = 6/125 (5%) Strand=Plus/Plus Query 6750 AGCCTTTTCCCTTTAACT----TGAGAGAATGATCAGCCACATTGGGACTGA-AAACGGC 6804 ||||| || ||||| || ||| |||||||||||||||||||||||||| | ||||| Sbjct 2777 AGCCTATTATCTTTAGCTGGTTTGAAAGAATGATCAGCCACATTGGGACTGAGACACGGC 2836 Query 6805 CCAAGTCTTCTAAAAGGGCAGCAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGA 6864 |||| ||| | || ||||||||||| |||| || ||||||| |||||||||||||| | Sbjct 2837 CCAA-ACTTTTTTAAAGGCAGCAGTGGGGAATTTTGGACAATGAGCGAAAGCTTGATCCA 2895 Query 6865 GTAAT 6869 ||||| Sbjct 2896 GTAAT 2900 >seq9013 Length=1413 Score = 102 bits (112), Expect = 2e-16 Identities = 74/86 (86%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 372622 TAGGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTT 372681 ||||||| ||| ||||| |||| ||||||||||| ||||||| ||||||| ||||| | Sbjct 1005 TAGGTGTCACAAAATAGGGGGTTGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATG 1064 Query 372682 GTAAAACGATGTATAGGGTCTGACAC 372707 |||| | ||||||||||||||||||| Sbjct 1065 GTAACATGATGTATAGGGTCTGACAC 1090 >seq7855 Length=1583 Score = 100 bits (110), Expect = 7e-16 Identities = 102/132 (77%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 7731 AGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACA 7790 || ||||||||| |||| |||| |||| ||||||||||||| ||||||||||| | | Sbjct 1159 AGAGTTGGTAAGGTTCTGCGCGTATTATCGAATTAAACCACATGCTCCACCGCTTGTGTA 1218 Query 7791 ATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT-ATT 7849 || |||||| || |||||| ||| || |||||| | || | ||||| ||| | || Sbjct 1219 GACTCCCGTCAATTCCTTTGAATTTCAATCTTGCGATTATACTTTTCAGGCGGAGTGCTT 1278 Query 7850 TACGCGTTAGCT 7861 ||||||||||| Sbjct 1279 AACGCGTTAGCT 1290 Score = 100 bits (110), Expect = 7e-16 Identities = 102/132 (77%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 7731 AGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACA 7790 || ||||||||| |||| |||| |||| ||||||||||||| ||||||||||| | | Sbjct 1419 AGAGTTGGTAAGGTTCTGCGCGTATTATCGAATTAAACCACATGCTCCACCGCTTGTGTA 1478 Query 7791 ATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT-ATT 7849 || |||||| || |||||| ||| || |||||| | || | ||||| ||| | || Sbjct 1479 GACTCCCGTCAATTCCTTTGAATTTCAATCTTGCGATTATACTTTTCAGGCGGAGTGCTT 1538 Query 7850 TACGCGTTAGCT 7861 ||||||||||| Sbjct 1539 AACGCGTTAGCT 1550 >seq1023 Length=18726 Score = 100 bits (110), Expect = 7e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 193619 TCCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAG 193678 ||| ||| ||||||||||||| || || |||| || || | || || || | ||| Sbjct 3290 TCCCTCCGTCTCGTACTTTTCATAGAGGGCCTCGAATTCGTCGCCCCAGCACTCATAGAG 3349 Query 193679 ACCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCAT 193738 || || || || || ||||||||||||||||| | |||| ||||||||||||||| Sbjct 3350 TCCAGGGGCCTCGTTAGGGCAAAAGAGACTCCACTTGCCATTGGCTTCCACCCTCTTCAT 3409 Query 193739 GAAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771 ||| || |||| ||||| ||||||||| || Sbjct 3410 GAACAGATCAGGCACCCAAAGGGCGTAGAACAG 3442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192387055027196