Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2 253 2e-62 >seq2 Length=11587142 Score = 253 bits (280), Expect = 2e-62 Identities = 490/710 (69%), Gaps = 15/710 (2%) Strand=Plus/Plus Query 145684 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCG 145743 || ||||| |||||||| || || ||||| || || || | ||||||| || || || Sbjct 8407818 AGCGGCTCGACGTGGTTCAGATACACGTGGGCATCGCCAATAACGTGGACAAACTCACCA 8407877 Query 145744 GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTT 145802 |||| | ||||| | || || |||| || | ||||||| | ||||||||| || || Sbjct 8407878 GGCTTCAACCCCGTCACCTGCGCCACCA-GTCGCGTCAGCAACGCGTAGCTGGCGATATT 8407936 Query 145803 GAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCC 145862 ||| ||||| || || |||||||| ||||||||||||||| ||| ||||| | ||| || Sbjct 8407937 GAACGGCACGCCAAGTCCCATGTCGGCCGAGCGCTGGTACATCTGACAGGACAACTCGCC 8407996 Query 145863 GCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 | | ||||||||||||||||| | | |||||| ||||| || ||||| || || || Sbjct 8407997 GTCAGCCACGTAGAACTGGCAGAACATGTGGCACGGCGGGAGCGCCATTTCGTTGAGATC 8408056 Query 145923 CGCCGGGTTCCAGGCGGTGAGGACGAGCC-TCCTGCTCTCGGGGTTCCTCTTGATCTCCC 145981 |||||||||||| || | || |||| || || | || |||||| | | || Sbjct 8408057 CGCCGGGTTCCACGCCGACAGCACGATCCGTCGGTCGGTC-GGGTTCGTGCGCAGCTTGT 8408115 Query 145982 CTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACG 146040 || | ||| |||||||||||||||||| | ||| || | | || | |||| | Sbjct 8408116 GAATAACCTCCGCGAGCTGGTCCACGCCCTGGTTCGTGTAGTC-GGCATGCATGTCCGTG 8408174 Query 146041 TACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCC 146100 ||| |||||| ||||||| ||||||||| |||||||| || || || || || || Sbjct 8408175 TACTTGGCCCCAAAGTGCCGCCACTGGAAGCCGTAGACCGGTCCGAGATCGCCCACTTCT 8408234 Query 146101 CTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTG 146160 | ||| || | | | || | ||||| || || ||| |||||||||| | | Sbjct 8408235 CGCGATTGCAGTCCACGACTGTCCAGATACTCCCGCGATCCATTGCCGTCCCAGATGTGG 8408294 Query 146161 ACGCCCCTC-GCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219 | | || || || | ||| | | |||| || ||||||||||| |||||||| Sbjct 8408295 ATGTCCTTCTGCTG-CAGCGTGTGCGCACTCGTGTCTCCACTGATGAACCACAGCAGCTC 8408353 Query 146220 TTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAAC---TGGCCCCG 146276 || || || | |||||| || | |||||| || ||||| |||||| | | ||| Sbjct 8408354 CTCCGCCACGCCGCGCCAGAACACGCGCTTGGTCGTGAGCAGTGGGAACACGTTGTCCCT 8408413 Query 146277 CAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAGGGTGCCCACGCCCGTCC--TGTCC 146334 ||| | || ||| | || ||||| ||||| ||||| ||||||| | ||| Sbjct 8408414 CAGACTGAACCGCATCTGCGCGCCAAAGACCGACAGCGTGCCTGTTCCCGTCCGGTCTCC 8408473 Query 146335 CCCCTGCGCACCCCGTTCGCCAGGATCTCCCTGACGGTGTTGAGGTACTG 146384 | || ||| ||| | | |||||||| | || || ||||||||| Sbjct 8408474 GCGCTTCGCTCCC--TGGGTCAGGATCTTGCGGATCAAGTCGAGGTACTG 8408521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076195171280