Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 >seq2 Length=11587142 Score = 91.5 bits (100), Expect = 1e-13 Identities = 185/272 (68%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 97003 AGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGC-TCTGTGAGAGCATCAATGTGATT 97061 ||||| ||||| || | || |||||||||||||| |||| ||| | || | ||| || Sbjct 8407776 AGTGTCGGGAATGGGCGCGGCATTCGCGTAAGCTGCTTCTG-GAGCGGCTCGACGTGGTT 8407834 Query 97062 CACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGAC 97121 || ||| | ||| ||||| || | | ||| | ||| || ||||| || | || || Sbjct 8407835 CAGATACACGTGGGCATCGCCAATAACGTGGACAAACTCACCAGGCTTCAACCCCGTCAC 8407894 Query 97122 ATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCC 97181 || || | || | || | | | ||||| || || || || ||||| || ||||| Sbjct 8407895 CTGCGCCACCAGTCGCGTCAGCAACGCGTAGCTGGCGATATTGAACGGCACGCCAAGTCC 8407954 Query 97182 CATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 ||| || || || | || || | ||||||||| | || || ||| ||| || ||||| Sbjct 8407955 CATGTCGGCCGAGCGCTGGTACATCTGACAGGACAACTCGCCGTCAGCCACGTAGAACTG 8408014 Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTT 97273 | || | || || || || | |||||||| Sbjct 8408015 GCAGAACATGTGGCACGGCGGGAGCGCCATTT 8408046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783653432740