Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1 170 2e-37 >seq1 Length=13391543 Score = 170 bits (188), Expect = 2e-37 Identities = 200/268 (75%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 5500 CACGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACG-CCACCT 5558 |||||||||| ||||| ||||| ||||| | |||| || || | | || |||||| Sbjct 323157 CACGCCCGTGCTGCCGAAGCCGCCGGCGCCGCGCGCCGTGTCCTCGAT-CTCGTCCACCT 323215 Query 5559 CTTCCACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCT 5618 | | | || ||| || | |||| ||| |||||||| | |||||||| || Sbjct 323216 CCTGGATCTCCGGGTACTCGATCTTCTCGAGGATGAGCTGCGCCACGCGGTCGCCGCGCT 323275 Query 5619 TTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGT 5678 | || ||| || | | || ||||||||| | ||||||||||||||||||||||| Sbjct 323276 TGACGGGGAAGTCCTCGGCCGCGTGGTTGAACAGGATCACGCCCACGTTGCCGCGGTAGT 323335 Query 5679 CGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGG 5738 ||||||| |||||||| |||||| ||||||||| | ||||| ||| ||||||||||| | Sbjct 323336 CGGCGTCGATCACGCCGGCGCCCGTGTCGATGAACTTCTTGAGCGCGAGGCCGGAGCGAG 323395 Query 5739 GAGCCACGCGGCCGTAGCACCCATCGGG 5766 | |||||||| ||||||| || ||||| Sbjct 323396 GCGCCACGCGCGCGTAGCAGCCGTCGGG 323423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053970214384