Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 >seq1 Length=13391543 Score = 123 bits (136), Expect = 2e-23 Identities = 211/306 (69%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 74967 GCCGCGGGTTACGACCTGGCGGCCGCTCACCCGGTCGTGGTCCCCTCCTTTGGCAGGGCC 75026 |||||||| |||||| ||||||| || | |||| |||| | ||||| || | Sbjct 323513 GCCGCGGGCCTGGACCTGTCGGCCGCCTACGACGCCGTGATCCCGGCGGGTGGCAAGGGC 323454 Query 75027 CTGGTAAAGACAGACCTGGCCGTTAAGATGCCCCCGGGCCTCTACGGCAGGGTGGCTCCC 75086 || || ||||||||||||| | | ||||| ||| ||||| | ||||| || Sbjct 323453 CTCGTCAAGACAGACCTGGTCATCGCCGTGCCCGACGGCTGCTACGCGCGCGTGGCGCCT 323394 Query 75087 AGGTCCGGCCTGGCCCTGAAAAAATTTATAGACGTCGGTGCCGGGGTGGTGGACCCCGAC 75146 | |||||||| || || || || || || ||| || ||||| ||| | ||| ||||| Sbjct 323393 CGCTCCGGCCTCGCGCTCAAGAAGTTCATCGACACGGGCGCCGGCGTGATCGACGCCGAC 323334 Query 75147 TACAGGGGCAACCTCGGCGTCATACTGTTTAACTTTGGGTGCGACCCCTTTCGGGTCAAG 75206 ||| | |||||| | ||||| || ||||| ||| | | ||| ||| | |||||| Sbjct 323333 TACCGCGGCAACGTGGGCGTGATCCTGTTCAACCACGCGGCCGAGGACTTCCCCGTCAAG 323274 Query 75207 AGGGGCGACAGGATAGCCCAGCTCGTGCTCGAGAGGTACGAGTCTCCTCCCATTCTGGAG 75266 | |||||| | | || |||||| | ||||||| | ||||| || || | |||| Sbjct 323273 CGCGGCGACCGCGTGGCGCAGCTCATCCTCGAGAAGATCGAGTACCCGGAGATCCAGGAG 323214 Query 75267 GTGGAC 75272 |||||| Sbjct 323213 GTGGAC 323208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338764461446928