Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_008194.1 Length=74483 Score E Sequences producing significant alignments: (Bits) Value seq1 206 1e-48 >seq1 Length=13391543 Score = 206 bits (228), Expect = 1e-48 Identities = 403/591 (68%), Gaps = 11/591 (2%) Strand=Plus/Minus Query 65459 CGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTATGTCTCCAC-GC 65517 || |||||||| ||||||||||| || || || ||| |||| || || || Sbjct 9083380 CGTGTGGTGGAGATCTACGGCCCCGAGAGCTCCGGCAAGACAACGCTGGCGCTGAGTTGC 9083321 Query 65518 GGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCT 65577 || ||| || |||||| | || || | | |||| ||||||||| ||||| || | Sbjct 9083320 ATTGCTCAA-GCTCAGAAGACTGGCGGGACCTGTGCCTTCATCGACGCAGAGCATGCCAT 9083262 Query 65578 GGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCC 65637 ||| | | ||||||||||| || ||||| ||| | ||| ||| || ||||| Sbjct 9083261 TGACGCCCACTACGCCAAGGCTCTGGGTGTCGACATTGACGCGCTCTACGTCTCGCAGCC 9083202 Query 65638 GGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTC 65697 |||| | ||||| | || |||||||||| ||| ||| ||| ||| || | || Sbjct 9083201 GGACTCGGGCGAAGAAGCTCTGGAGATCGCCGACACGCTCATCAGGTCGGGGGCAGTGGA 9083142 Query 65698 CATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACAT 65757 | |||| || | ||| ||||||||| |||||||||||||| ||||| ||||| || || Sbjct 9083141 CCTCGTGGTGCTGGACAGTGTGGCGGCTCTGGTGCCGCGCGCGGAGCTGGAAGGTGAAAT 9083082 Query 65758 CGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCAC 65817 || ||| || | | ||||| |||||||||||| ||||| |||| ||||| || Sbjct 9083081 GGGAGACCAGCAGATTGCGCTGCAGGCGCGCCTCATGAGCCAGGCGCTGCGGAAGCTGAC 9083022 Query 65818 TGGCACCATCTCCAGCACCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAA 65874 || | | |||| |||| ||| | | ||| | |||||| | ||| |||| Sbjct 9083021 GGGATCGCTGTCCAAGTCCAACTGCACCATTA---TCTTCCTGAACCAGATCCGCCAGAA 9082965 Query 65875 GATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTT 65934 | | |||| | | || ||| | ||| || |||| |||| ||| || | | Sbjct 9082964 GGTGGGCATCAT---CTTCGGATCACCTGAGGTGACGTCGGGTGGCACGGCGCTGCGTTA 9082908 Query 65935 CTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGC 65994 |||||| || || || |||| | ||||||| | || ||||| ||||| ||| Sbjct 9082907 CTACGCGTCTGTGCGGCTGGACATTCGTCGCAAGACGGCCATCAAGGAGGGCGACCAGGT 9082848 Query 65995 TGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCC 66045 |||||||||| ||| ||||||||| | |||||||||||||||| |||| Sbjct 9082847 TGTCGGCAACGAGACCGTGGTGAAGGTGGCCAAGAACAAGCTGGCCTCGCC 9082797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238220561928088