Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq1 178 6e-40 >seq1 Length=13391543 Score = 178 bits (196), Expect = 6e-40 Identities = 393/585 (67%), Gaps = 11/585 (2%) Strand=Plus/Minus Query 65973 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCAC-GC 66031 || || |||||||||||||| || ||| || || ||| ||||| || || || Sbjct 9083380 CGTGTGGTGGAGATCTACGGCCCCGAGAGCTCCGGCAAGACAACGCTGGCGCTGAGTTGC 9083321 Query 66032 GGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCT 66091 || ||| || |||||| | || || | | |||| ||||||||| || ||| | | Sbjct 9083320 ATTGCTCAA-GCTCAGAAGACTGGCGGGACCTGTGCCTTCATCGACGCAGAGCATGCCAT 9083262 Query 66092 CGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCC 66151 ||| | | |||||| ||| || || || || | ||| ||| || |||||| Sbjct 9083261 TGACGCCCACTACGCCAAGGCTCTGGGTGTCGACATTGACGCGCTCTACGTCTCGCAGCC 9083202 Query 66152 AGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTC 66211 ||| | ||||| | || |||||||||| ||| ||| ||| ||| || | || Sbjct 9083201 GGACTCGGGCGAAGAAGCTCTGGAGATCGCCGACACGCTCATCAGGTCGGGGGCAGTGGA 9083142 Query 66212 CATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACAT 66271 | || | || ||||| ||||||||| ||||||||||| |||||||| ||||| || || Sbjct 9083141 CCTCGTGGTGCTGGACAGTGTGGCGGCTCTGGTGCCGCGCGCGGAGCTGGAAGGTGAAAT 9083082 Query 66272 CGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGAC 66331 || ||| ||| | | ||||| || ||||| ||| ||||| |||| |||||||| Sbjct 9083081 GGGAGACCAGCAGATTGCGCTGCAGGCGCGCCTCATGAGCCAGGCGCTGCGGAAGCTGAC 9083022 Query 66332 CGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGAT 66391 || || | ||| ||||| || | | |||| ||| | ||| ||||| | Sbjct 9083021 GGGATCGCTGTCCAAGTCCAACTGCACCATTATCTTCCTGAACCAGATCCGCCAGAAGGT 9082962 Query 66392 CGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTA 66451 |||| | | || ||| | |||| || | ||||| | ||| ||||| | ||| Sbjct 9082961 GGGCATCAT---CTTCGGATCACCTGAGGTGACGTCGGGTGGCACGGCGCTGCGTTACTA 9082905 Query 66452 CGCCTCGGTGCGTATGGA---TGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGC 66508 ||| || ||||| |||| | |||| || |||| | ||||| ||||| ||| Sbjct 9082904 CGCGTCTGTGCGGCTGGACATTCGTCGCAAGACGGCCATC---AAGGAGGGCGACCAGGT 9082848 Query 66509 TGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGC 66553 |||||||||| || |||||||| | ||||||||||||||| Sbjct 9082847 TGTCGGCAACGAGACCGTGGTGAAGGTGGCCAAGAACAAGCTGGC 9082803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242470157681144