Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq7 506 2e-138 >seq7 Length=4006126 Score = 506 bits (560), Expect = 2e-138 Identities = 1123/1683 (67%), Gaps = 51/1683 (3%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 || |||||||| ||||| ||||| || || ||| ||||| |||| || || |||||| Sbjct 2440549 GCGACCCCGACACTGTTTAACGCCGGCACGCCGCGCCCACAACTGTCGTCCTGCTTCCTG 2440490 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || | | ||| ||||||||| || || | ||||| |||||| | || ||| | Sbjct 2440489 TTGGCCATGCAGGACGACTCCATTGAGGGCATCTACGACACGCTCAAGCAGTGCGCGTGC 2440430 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || | || || || ||||| ||||| | ||| || | || |||| | | | Sbjct 2440429 ATCTCTAAGTGGGCCGGAGGTATCGGCATCAGCATGCACAACATCCGCGCCACGAATAGC 2440370 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||||| || || || ||| | ||||| ||| || |||| ||||| || || |||||| Sbjct 2440369 TACATCCGTGGCACGAACGGCTCGTCCAATGGCATCATCCCCATGCTGCGCGTGTTCAAC 2440310 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 || |||| ||||||||||||||||| || || | | | ||||| || ||||| |||| Sbjct 2440309 GACACGGCCCGCTACGTGGACCAGGGCGGAGGCAAGCGCAAGGGCTCGTTCGCCATCTAC 2440250 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || ||||||||||||||||||||| | ||| | |||||||| ||||||||||||||| Sbjct 2440249 CTTGAGCCCTGGCACGCGGACGTGTTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAAC 2440190 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || ||| | | || | ||||| |||||||| || |||||||| || || || ||||| Sbjct 2440189 GAGCTGCACCGCGCGCGCGACCTGTTCTACGCGCTGTGGGTGCCCGATCTGTTCATGAAG 2440130 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 | || ||| || | |||||||| || || ||||||||| ||| || || | | Sbjct 2440129 AGGGTGGAGGCCAATGGCAAGTGGAGTCTGTTCTGCCCCAATGAAGCTCCTGGGCTCTAC 2440070 Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 || || || | ||||| | | |||| ||||| | |||| || Sbjct 2440069 GAGTGCTGGGGCGAGGAGTTTGAGACCCTTTATGAAAAGTACGAGAAGGAGGGACGCGCG 2440010 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | ||| || | || | |||||||| ||| |||||| ||| | |||||| Sbjct 2440009 CGCAAGACGATCAACGCGCAGCAGCTGTGGTTCGCCATCCTGGACGCGCAGATCGAGACG 2439950 Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551 || ||||| ||| | | ||||||| | | |||| ||||| ||||||||| ||||| Sbjct 2439949 GGCGTGCCCTTCATGCTCTACAAGGACGCGGCCAACCGGAAGTCGAACCAGCAGAACCTC 2439890 Query 94552 GGGGTGATCAAGAGCTC---GAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608 || |||| |||| || ||||| |||| | | ||||| || || || ||| Sbjct 2439889 GGTACGATC---CGCTCCAGCAACTTGTGCTGCGAGGTGATGGAGTACACGTCCCCCGAC 2439833 Query 94609 GAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC 94668 ||| | || ||||| ||||||| ||| | ||| ||| || ||| ||| | Sbjct 2439832 GAGGTGGCCGTGTGCAACCTGGCCTCGGTGGCGCTGCCCAAGTTTGTG-GAGGAG----G 2439778 Query 94669 ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT- 94727 ||| |||||| || |||| || || || | | |||| | Sbjct 2439777 GCGT----------GTTCGACTACCAGAAGCT------CTACGAGGTCACCAAGGTCATC 2439734 Query 94728 -----GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAAC 94782 |||||||||| ||| |||||| |||| ||||||||| | |||||| || Sbjct 2439733 ACGCGCAACCTGAACAAGGTCATCGACGTCAACTACTACCCCGTGGCCGAGGCGCGCAAG 2439674 Query 94783 TCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTG 94842 || ||| || || || ||||||||||||||||||||||| ||||||||||| | | Sbjct 2439673 TCCAACATGCGTCACCGCCCCATCGGCATCGGCGTCCAGGGCCTCGCGGACGCGTTCATC 2439614 Query 94843 ATGATGCGTCTGCCCTACGACTCTGTCGACG-CGGCGGGTTTGAATTTGAACATATTCGA 94901 | ||| | | | ||| | || | | ||| | | || ||| || ||||| Sbjct 2439613 CTCATGAACTTCGCGTTCGAGAGCGAGGAGGCCCGCGAG-CTCAACAAGAAGATCTTCGA 2439555 Query 94902 AAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCC 94961 | ||| || || | |||||| | ||| | | | |||| ||| ||| || Sbjct 2439554 GACCATCTACTATGCAGCCATGGAGACGTCCATGGAGATCGCCA---AGGAGCTCGGCCC 2439498 Query 94962 ACACGAATCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGG 95019 |||| |||||| || ||||| | | | ||||||| || ||||||||| | ||| Sbjct 2439497 GTACGAGACGTTCCAGGGCTCGCCGGCCAGCA--AGGGCATCTTCCAGTTCGACATGTGG 2439440 Query 95020 GGTGTGA---AGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAA 95076 || || | | | |||| |||| |||||| || || | | || ||||| Sbjct 2439439 GGCGTCACCCCGTCGTCGGACCTGTGGAACTGGGCGGCGCTGAAGGAGAACGTGATCAAG 2439380 Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 ||||| || ||| ||||||| ||||||||||||||||| ||||| ||||| |||||| Sbjct 2439379 CACGGCCTGCGCAACTCGCTGCTGGTGGCCCCCATGCCCACTGCCTCGACGGCCCAGATC 2439320 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 || |||||||||||||| |||| || | ||| |||||| |||||||| | || ||||| Sbjct 2439319 CTCGGCAACAACGAGTCCATCGAGCCGTACACGTCCAACATGTACAACCGCCGCGTGCTG 2439260 Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTG 95256 ||||| || ||| | || |||||||| |||| | ||| |||| ||||| | Sbjct 2439259 GCCGGCGAGTTCACGATCGTCAACAAGTACCTGATGAAGGAGCTGATCGAGCTGGGCATC 2439200 Query 95257 TGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCG 95316 ||| | | || ||||| | || || | ||||||||| ||||| || | Sbjct 2439199 TGGACGCCCGACGTGCGCAACCAGATCCTGAACGACGGCGGCTCCGTGCAGAAGGTCAAG 2439140 Query 95317 CAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATC---CCGCAGCGC 95373 || ||||| || |||||| | |||||||| |||||||||||| | | || | Sbjct 2439139 GCCATCCCGGACCACGTCAAGGAGAAGTACAAGACGGTGTGGGAGATCAAACAGAAGGCC 2439080 Query 95374 GTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNN 95433 ||| || |||| |||||| |||||| ||| ||| |||||||| Sbjct 2439079 GTG---CTGGACCTGTCGGCCGACCGCGGCGCCTACATTTGCCAGAGCCAGTCGCTCAAT 2439023 Query 95434 NNNNNNATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAGA 95493 || ||||| || | | | || | ||||| ||| ||||||| |||| Sbjct 2439022 ATCCACATCGCCGACCCGACCATCAGCAAGCTCACGTCGATGCACTTCTACGCCTGGAAG 2438963 Query 95494 AAGGGTCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACAG 95553 ||||| ||||||||||| ||||| || |||| | || || || ||| |||| || Sbjct 2438962 AAGGGGCTCAAGACCGGCATGTACTACATGCGCGGACGCCCGAAAGCCGACGCCATCAAG 2438903 Query 95554 TTC 95556 ||| Sbjct 2438902 TTC 2438900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722692908720